Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00775 ATGTCATTCCGTAGCCTAGTGCGTGATGTGAGGGATAGCATTGGAAGCTTATCCCGGCGAGGATTCGACATCAGACTATCTGGTCATAGCCGTGGAAAATCGGATGGTTTGCAACGTGATTTGCACGATCCACTTGTGGGTCAAAGCAATTGTTGGGCCAACCTCCCTCCCGAGCTCCTTTATGATGTAATTAGGAGGCTGGAGGAGAGTGAAAGCACGTGGCCTGCCAGAAAGCATGTCATCGCCTGTGCTTCCGTTTGCCGTTCTTGGAGAAACACTTGCAAAGAATTAGTTAAAAATCCTGAATTTTGTGGAAAGCTTACCTTTCCTGTGTCCCTAAAGCAGCCGGGGCCCCGGGACGGAACCATGCAGTGCTTCATTAAAAGGGATAAGTCGAATTTAACGTACCACCTTTATCTGTGTCTTAGCCCAGGCAAGTATTTTTTTCTGACAATCAAATTTTGGAATCTGACTTTTCTGCTGAATGTTGCAGCTCTGCTTGTAGAAAATGGGAAATTTCTTCTTTCTGCAAAACGGACACGAAGAACAACTAGCACTGAGTATGTTATCTCGATGGATGCCGAGAACATCTCAAGATCGAGTAGCAGCTACATTGGAAAATTAAGATCAAATTTTCTTGGTACGAAGTTCATCATTTACGACACGCAACCACCATACACAGCCGTGTCCGCTCCTACTCCCGGTAAAACAAGTCGAAGATTCACCTCAAAAAAGGTCTCCCCAAAAGTCCCAAGCGGGAGCTACAATATTGCCCAATTGGCTTACGAACTAAACGTGTTGGGTACACGGGGCCCGCGGAGAATGCATTGTGTGATGCATTCCATCCCGCTTTCGTCTCTCGATGCTGGTGGGTCCGTCCCCGGCCAGCCAGAGCTCCTTCCACGGCCACTTGAAGACTCGTTCCGGAGCATTTCCTTCTCGAAATCTCTTGATTACTCTATGGAGTTCAGCAGCTCGAGGTTTTCCGAAATCAACAGACGCGTCGTCGGTGACGGGGAGGAAAAGACTATGATGCCCTTGGTCCTGAAAAACAAGCCGCCAAGGTGGCACGAGCAATTGCAGTGCTGGTGTTTGAATTTCCGAGGTCGGGTAACTGTTGCTTCCGTGAAGAACTTTCAGCTAATTGCAGGCACACAACCAGGGGCTGGAGCTCCGACGCCATCTCAGCCGACCCCGCCCGATCATGATAAGATAATTCTTCAGTTTGGGAAAGTGGGTAAAGACATGTTTACAATGGATTATCGTTATCCCTTATCGGCTTTTCAGGCTTTTGCCATTTGCTTGAGCAGCTTTGACACCAAATTGGCTTGTGAATAG 1338 47.98 MSFRSLVRDVRDSIGSLSRRGFDIRLSGHSRGKSDGLQRDLHDPLVGQSNCWANLPPELLYDVIRRLEESESTWPARKHVIACASVCRSWRNTCKELVKNPEFCGKLTFPVSLKQPGPRDGTMQCFIKRDKSNLTYHLYLCLSPGKYFFLTIKFWNLTFLLNVAALLVENGKFLLSAKRTRRTTSTEYVISMDAENISRSSSSYIGKLRSNFLGTKFIIYDTQPPYTAVSAPTPGKTSRRFTSKKVSPKVPSGSYNIAQLAYELNVLGTRGPRRMHCVMHSIPLSSLDAGGSVPGQPELLPRPLEDSFRSISFSKSLDYSMEFSSSRFSEINRRVVGDGEEKTMMPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAGTQPGAGAPTPSQPTPPDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 26557088 26558717 - BLOR07169 Blo15g00775 71175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00775 445 PRINTS Tubby superfamily signature 204 228 IPR000007 -
Blo15g00775 445 PRINTS Tubby superfamily signature 402 421 IPR000007 -
Blo15g00775 445 PRINTS Tubby superfamily signature 188 204 IPR000007 -
Blo15g00775 445 PRINTS Tubby superfamily signature 349 366 IPR000007 -
Blo15g00775 445 PRINTS Tubby superfamily signature 423 445 IPR000007 -
Blo15g00775 445 PRINTS Tubby superfamily signature 367 383 IPR000007 -
Blo15g00775 445 PRINTS Tubby superfamily signature 254 281 IPR000007 -
Blo15g00775 445 Pfam F-box domain 52 99 IPR001810 GO:0005515
Blo15g00775 445 PANTHER TUBBY-RELATED 1 445 - -
Blo15g00775 445 SUPERFAMILY Tubby C-terminal domain-like 101 445 IPR025659 -
Blo15g00775 445 Pfam Tub family 113 440 IPR000007 -
Blo15g00775 445 PANTHER TUBBY-LIKE F-BOX PROTEIN 10-RELATED 1 445 - -
Blo15g00775 445 ProSitePatterns Tub family signature 1. 367 380 IPR018066 -
Blo15g00775 445 Gene3D - 48 100 - -
Blo15g00775 445 ProSitePatterns Tub family signature 2. 430 445 IPR018066 -
Blo15g00775 445 SUPERFAMILY F-box domain 48 96 IPR036047 GO:0005515
Blo15g00775 445 Gene3D Tubby Protein; Chain A 111 439 IPR025659 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00786 Blo-Chr12:26257209 Blo15g00775 Blo-Chr15:26557088 0 dispersed
Blo13g00300 Blo-Chr13:15994859 Blo15g00775 Blo-Chr15:26557088 0 dispersed
Blo15g00775 Blo-Chr15:26557088 Blo16g00048 Blo-Chr16:1891899 1.54E-157 dispersed
Blo15g00775 Blo-Chr15:26557088 Blo02g00865 Blo-Chr2:33067374 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13355 PF01167 Tub 2.80E-112 CL0395 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00775 K19600 - gmx:100814578 721.079