Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo15g00775 | ATGTCATTCCGTAGCCTAGTGCGTGATGTGAGGGATAGCATTGGAAGCTTATCCCGGCGAGGATTCGACATCAGACTATCTGGTCATAGCCGTGGAAAATCGGATGGTTTGCAACGTGATTTGCACGATCCACTTGTGGGTCAAAGCAATTGTTGGGCCAACCTCCCTCCCGAGCTCCTTTATGATGTAATTAGGAGGCTGGAGGAGAGTGAAAGCACGTGGCCTGCCAGAAAGCATGTCATCGCCTGTGCTTCCGTTTGCCGTTCTTGGAGAAACACTTGCAAAGAATTAGTTAAAAATCCTGAATTTTGTGGAAAGCTTACCTTTCCTGTGTCCCTAAAGCAGCCGGGGCCCCGGGACGGAACCATGCAGTGCTTCATTAAAAGGGATAAGTCGAATTTAACGTACCACCTTTATCTGTGTCTTAGCCCAGGCAAGTATTTTTTTCTGACAATCAAATTTTGGAATCTGACTTTTCTGCTGAATGTTGCAGCTCTGCTTGTAGAAAATGGGAAATTTCTTCTTTCTGCAAAACGGACACGAAGAACAACTAGCACTGAGTATGTTATCTCGATGGATGCCGAGAACATCTCAAGATCGAGTAGCAGCTACATTGGAAAATTAAGATCAAATTTTCTTGGTACGAAGTTCATCATTTACGACACGCAACCACCATACACAGCCGTGTCCGCTCCTACTCCCGGTAAAACAAGTCGAAGATTCACCTCAAAAAAGGTCTCCCCAAAAGTCCCAAGCGGGAGCTACAATATTGCCCAATTGGCTTACGAACTAAACGTGTTGGGTACACGGGGCCCGCGGAGAATGCATTGTGTGATGCATTCCATCCCGCTTTCGTCTCTCGATGCTGGTGGGTCCGTCCCCGGCCAGCCAGAGCTCCTTCCACGGCCACTTGAAGACTCGTTCCGGAGCATTTCCTTCTCGAAATCTCTTGATTACTCTATGGAGTTCAGCAGCTCGAGGTTTTCCGAAATCAACAGACGCGTCGTCGGTGACGGGGAGGAAAAGACTATGATGCCCTTGGTCCTGAAAAACAAGCCGCCAAGGTGGCACGAGCAATTGCAGTGCTGGTGTTTGAATTTCCGAGGTCGGGTAACTGTTGCTTCCGTGAAGAACTTTCAGCTAATTGCAGGCACACAACCAGGGGCTGGAGCTCCGACGCCATCTCAGCCGACCCCGCCCGATCATGATAAGATAATTCTTCAGTTTGGGAAAGTGGGTAAAGACATGTTTACAATGGATTATCGTTATCCCTTATCGGCTTTTCAGGCTTTTGCCATTTGCTTGAGCAGCTTTGACACCAAATTGGCTTGTGAATAG | 1338 | 47.98 | MSFRSLVRDVRDSIGSLSRRGFDIRLSGHSRGKSDGLQRDLHDPLVGQSNCWANLPPELLYDVIRRLEESESTWPARKHVIACASVCRSWRNTCKELVKNPEFCGKLTFPVSLKQPGPRDGTMQCFIKRDKSNLTYHLYLCLSPGKYFFLTIKFWNLTFLLNVAALLVENGKFLLSAKRTRRTTSTEYVISMDAENISRSSSSYIGKLRSNFLGTKFIIYDTQPPYTAVSAPTPGKTSRRFTSKKVSPKVPSGSYNIAQLAYELNVLGTRGPRRMHCVMHSIPLSSLDAGGSVPGQPELLPRPLEDSFRSISFSKSLDYSMEFSSSRFSEINRRVVGDGEEKTMMPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAGTQPGAGAPTPSQPTPPDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE | 445 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 26557088 | 26558717 | - | BLOR07169 | Blo15g00775 | 71175 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo15g00775 | 445 | PRINTS | Tubby superfamily signature | 204 | 228 | IPR000007 | - | |
Blo15g00775 | 445 | PRINTS | Tubby superfamily signature | 402 | 421 | IPR000007 | - | |
Blo15g00775 | 445 | PRINTS | Tubby superfamily signature | 188 | 204 | IPR000007 | - | |
Blo15g00775 | 445 | PRINTS | Tubby superfamily signature | 349 | 366 | IPR000007 | - | |
Blo15g00775 | 445 | PRINTS | Tubby superfamily signature | 423 | 445 | IPR000007 | - | |
Blo15g00775 | 445 | PRINTS | Tubby superfamily signature | 367 | 383 | IPR000007 | - | |
Blo15g00775 | 445 | PRINTS | Tubby superfamily signature | 254 | 281 | IPR000007 | - | |
Blo15g00775 | 445 | Pfam | F-box domain | 52 | 99 | IPR001810 | GO:0005515 | |
Blo15g00775 | 445 | PANTHER | TUBBY-RELATED | 1 | 445 | - | - | |
Blo15g00775 | 445 | SUPERFAMILY | Tubby C-terminal domain-like | 101 | 445 | IPR025659 | - | |
Blo15g00775 | 445 | Pfam | Tub family | 113 | 440 | IPR000007 | - | |
Blo15g00775 | 445 | PANTHER | TUBBY-LIKE F-BOX PROTEIN 10-RELATED | 1 | 445 | - | - | |
Blo15g00775 | 445 | ProSitePatterns | Tub family signature 1. | 367 | 380 | IPR018066 | - | |
Blo15g00775 | 445 | Gene3D | - | 48 | 100 | - | - | |
Blo15g00775 | 445 | ProSitePatterns | Tub family signature 2. | 430 | 445 | IPR018066 | - | |
Blo15g00775 | 445 | SUPERFAMILY | F-box domain | 48 | 96 | IPR036047 | GO:0005515 | |
Blo15g00775 | 445 | Gene3D | Tubby Protein; Chain A | 111 | 439 | IPR025659 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo12g00786 | Blo-Chr12:26257209 | Blo15g00775 | Blo-Chr15:26557088 | 0 | dispersed | |
Blo13g00300 | Blo-Chr13:15994859 | Blo15g00775 | Blo-Chr15:26557088 | 0 | dispersed | |
Blo15g00775 | Blo-Chr15:26557088 | Blo16g00048 | Blo-Chr16:1891899 | 1.54E-157 | dispersed | |
Blo15g00775 | Blo-Chr15:26557088 | Blo02g00865 | Blo-Chr2:33067374 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13355 | PF01167 | Tub | 2.80E-112 | CL0395 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo15g00775 | K19600 | - | gmx:100814578 | 721.079 |