Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00779 ATGGGGAAGAAGAGCAAAAGCCAGGAGCACAAGGTCCTTCTCCCTCCGGACCTTCCTCCCGATATTGCAGATGAAGAAATCCAAGTCTCAGACGAGGACTTGCAGTTCGTCAACGAAAACCAAGACTACGCCGGCTTTGTTTCTCGCTTGGACACCCAATCCATTACAAAGCATGTTATTCGTGTGGCTGATGTTAAAGAAGATGCTTTGGAAGCTTTGTATGAGAAGCGTTTGAAGAAGAAGGCGATGCAGAAAGAAAATGAACAGACCAAACATCCAGTTGATAATGTAGATGCCCTTCCTGTTAAAACCCTGGAAGGGAAACTCTACTACCGAAAACTGACAAATATATCAGAAATGAAACAAAGTAGTCAGAACGAAGAGGAAGCTGGTGAGAATGGTGCTGTTGACTATAGTATTGCAAAATTAACTAAAGCAGATAGAAGAGCAAAGCTTAAGAAAAGTAAGAAAGAGCTGAAAAAACAAGGGAAGGAGTTAGATAAAGTAGAAGTTGTTCAACAAATGCCACAGACAGCCGTTCTGGCCGAGGTTAAGGAAAATCTCACTGCAGAAGAAGCGCTTGAGGACAAGAAGCGAAAACTTGCTGAACTAGGGAGCGCACTGCTTGCAGATCCAGAGTCCAACATCAAATCCTTGATTGAGATGCTGCAACTCATTAAGGATACAAATCATACCATTGTGAAACTGGGACTGCTATCCATGTTCACTGTTTTCAAGGACATCATTCCGGGGTATTATAGGATAAGACTTCCTACTGAAAAAGAGCTAGAAATGAAAGTTTCAAAGGATGTTAAGAGGATGCGATTTTATGAATCAACACTTCTTTCCTCTTACAAGGTATATTTGCAGAAGTTGATGTCCTTGGAGAAGCATTCCTCATTTCGTCATGTAGCTGTGCGCTGTGTGTGTGACTTGGTTGAGGCAGTTCCCCACTTCAACTTCCTAGAGAGCTTGTTAAATATTGTCGTTATGAACTTTAGCTCTCCTGATGATATCATAAGAAACCTCAGTTGCACAGCTATTAAATCACTTTTTACCAATGAGGGCAAACATGGCGGTGAAGCTACTGTAGATGCTGTTAGGCTGATTGCTAATCAAGTTAAAGTTCACGAATGCCAATTGCATCCTGATTCCATCGAGACCTTCTTGTCCCTGTCCTTCGATGAGGATCTTGGCAGGCCAGAAAAGACAGACATAGATCGAGGAAAAAACAAGAAAAGGAAAAAAGGAAAAAGATTTGAGGCTCGCAGTCAATTAGAAGAAGATGAAAGAAAAAAGAGTACTAAAGAAATGAGGATGAGAATAGGAGAGGAGGTTGCTGCTGATTATAGGGCTGCTTCTTTTGTCCCAGATTTAATGAGACGAAGACAGATGCAATCAGATACGCTTTCTGCTGTGTTTGAAACATATTTTCGCATTTTGAAGAATACAATGTTGTCAACTGCCATAGAGTCTGGAGCAAATGCTGGTCTATCTGCTGGTGGATCTGGATCGCACCCTCTGCTCGCTCCTTGTTTAAAAGGACTTGGAAAATTTTCTCACTTTATTGACTTGGATTTTTTAAGCGATCTTCTGAATTATCTGAAAAAGCTCGCATCTAGTGGTGACAAGTCCAATGAATCTTCAGAGAAAATTTCCAAGTGTTTGAGCATATCTGAGCGCCTTCATTGCTGCATTGTTGCCTTTAAAGTGGTGAAAAAGAATCTTGGTGCTCTGAATATTGATCTACAGGACTTCTGTGTACAACTATATAATATTGTACTTGAGTATCGGCCTGGAAGAGATCAAGGTGAAGTGTTGGCCGAAGCATTGAAAGTAATGTTGTGTGAGGATAGACAGCATGACATGCAAAAGGCTGCAGCATTTGTCAAACGCTTGGCTAGTTTTTCATTATGCTTTGGATCTGAAGAGGCCATCGCTGCCTTGGTGACATTAAAGCATCTTCTCCAAAAAAATGTAAAATGCAGAAATTTGTTGGAAAATGATGTTGGAGGAGGCTCTGTTTCAGGCTCAACTGCGAAATATCAACCATATGCTTCTGATCCCAATTTGAGTGGCGCTCTTGCATCAGTCTTGTGGGAACTAGATCTTCTATCCAGTCATTATCATCCTGCTGTCTCCAAAATGGCTTTGACCATTTCAAGCATGAACAATGCTGATAACCAAGTTTATGTCTCCACCCCTTCCCCTCTGCAAGCATTTACAGGATCCTCGCTGGAACAGGAGACATTCAACCAGCAGATTGACATCCGAAAAGGCAATAAGAAGAGAAAAAGAAGTAGAGACTCTTCGTCGTTAGGTAGCAACCCCAGTATTTCAGACACAAGTACTATAAATGAAGATGAGGTGAGGAAGAGACTTGGTGATCATTTCATACTTCTTCGGGACATCAAAGAAAATGAAAGGCTGAGGGGCGAGTTGCAGCGGACGACATTGTCCTTGCGGCTATACGAAGAATATCGAAAGCAGCAGAAGAAAAAAGGTTAG 2508 41.67 MGKKSKSQEHKVLLPPDLPPDIADEEIQVSDEDLQFVNENQDYAGFVSRLDTQSITKHVIRVADVKEDALEALYEKRLKKKAMQKENEQTKHPVDNVDALPVKTLEGKLYYRKLTNISEMKQSSQNEEEAGENGAVDYSIAKLTKADRRAKLKKSKKELKKQGKELDKVEVVQQMPQTAVLAEVKENLTAEEALEDKKRKLAELGSALLADPESNIKSLIEMLQLIKDTNHTIVKLGLLSMFTVFKDIIPGYYRIRLPTEKELEMKVSKDVKRMRFYESTLLSSYKVYLQKLMSLEKHSSFRHVAVRCVCDLVEAVPHFNFLESLLNIVVMNFSSPDDIIRNLSCTAIKSLFTNEGKHGGEATVDAVRLIANQVKVHECQLHPDSIETFLSLSFDEDLGRPEKTDIDRGKNKKRKKGKRFEARSQLEEDERKKSTKEMRMRIGEEVAADYRAASFVPDLMRRRQMQSDTLSAVFETYFRILKNTMLSTAIESGANAGLSAGGSGSHPLLAPCLKGLGKFSHFIDLDFLSDLLNYLKKLASSGDKSNESSEKISKCLSISERLHCCIVAFKVVKKNLGALNIDLQDFCVQLYNIVLEYRPGRDQGEVLAEALKVMLCEDRQHDMQKAAAFVKRLASFSLCFGSEEAIAALVTLKHLLQKNVKCRNLLENDVGGGSVSGSTAKYQPYASDPNLSGALASVLWELDLLSSHYHPAVSKMALTISSMNNADNQVYVSTPSPLQAFTGSSLEQETFNQQIDIRKGNKKRKRSRDSSSLGSNPSISDTSTINEDEVRKRLGDHFILLRDIKENERLRGELQRTTLSLRLYEEYRKQQKKKG 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 26647703 26657281 - BLOR07173 Blo15g00779 71179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00779 835 Pfam CBF/Mak21 family 562 717 IPR005612 -
Blo15g00779 835 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 6 785 IPR016903 -
Blo15g00779 835 MobiDBLite consensus disorder prediction 752 784 - -
Blo15g00779 835 MobiDBLite consensus disorder prediction 420 437 - -
Blo15g00779 835 Coils Coil 149 172 - -
Blo15g00779 835 MobiDBLite consensus disorder prediction 401 437 - -
Blo15g00779 835 Pfam Nucleolar complex-associated protein 197 288 IPR011501 -
Blo15g00779 835 MobiDBLite consensus disorder prediction 1 22 - -
Blo15g00779 835 PIRSF Noc3 3 774 IPR016903 -
Blo15g00779 835 SUPERFAMILY ARM repeat 200 724 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00617 Blo-Chr15:15364474 Blo15g00779 Blo-Chr15:26647703 2.94E-89 dispersed
Blo15g00681 Blo-Chr15:21086685 Blo15g00779 Blo-Chr15:26647703 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00779 K14834 - jre:109001766 1061.21