Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00788 ATGGCTTTAGAGGTTGCAGCCCACCAGACCTACGGGTTTGGTTCGCGATCCCCGAAAGAAGAAGATCGTGCCCTTTCCTTCGATGCGAAGAAGCTATTTGCATCCACCCATGACGTCAGCAATAACGCCATTGATCGAGACTCTCTGTCTTGCTACGGCCTGTCAGGACATTCGGGTGGTTACGCAAGTTGTGTCGTTGCTGAGCTAATCACCGACAACTCGGGTAATGAGCTGAACCTTCGAATTGTACCGGAATTGGCTACGGCCCGTCGGCACATCCGGGCGGTTAGTACGAAATTTAAACCAATATTTCCCTTTTCGGTTGTCGGAGGAAAGTCGTCATGCCAGTCTGGAAAGGGTCGGGGCAATGTAATTCCTGTCAAGTATGGCTTCAGTCTAGCTAAAGGGAAAGCAAATCATCCAATGGAGGATTATCACGTTGCTAGGTTTATTCCATTTCGTGGACATGAGCTTGGGCTTTTTGCTATATACGATGGACATCTGGGAGATGCTGTACCTGCCTATTTACAAAAGCATCTGTTTCGTAATATCTTGAAGGATGAGGCGTTTTGGACTAATCCTCGGAGATCTATCTTGGAAGCCTATGAGAGGACAGACCAAGCAATTCTTTCTCACTCTCCTGACCTAGGGAGAGGCGGATCAACTGCAGTTACTGCTATTCTGATAAACGGTCGGAAGTTATGGGTTGCAAATGTTGGAGATTCACGAGCAGTTCTTTCGAGGAGAGGGCAGGCCGAGCAGATGACAATTGATCATGAGCCAAATACTGATAGGGTTAGCATCGAGGATAGAGGTGGCTTTGTCTCAAATATGCCAGGCGATGTTGCAAGAGTTAATGGACAGCTGGCTGTTTCTCGAGCCTTTGGTGACAAGAACCTCAAAACACACTTGCGATCTGATCCCGACATAAAAGACGCCGATATTAATGAAGAGACCGATCTTCTTATTTTAGCCAGCGATGGCATATGGAAGGTGATGTCGAATCAAGAAGCAGTAGATATCGGGCGAAAGACGAAAGACCCGGCAAAGGCAGCCAAGCAACTGGTGTCAGAGGCGTTGAACCGTGAAAGCAAGGACGATATCTCCGTCGTTGTGGTTCGTTTTGCTGGCTGA 1134 47.97 MALEVAAHQTYGFGSRSPKEEDRALSFDAKKLFASTHDVSNNAIDRDSLSCYGLSGHSGGYASCVVAELITDNSGNELNLRIVPELATARRHIRAVSTKFKPIFPFSVVGGKSSCQSGKGRGNVIPVKYGFSLAKGKANHPMEDYHVARFIPFRGHELGLFAIYDGHLGDAVPAYLQKHLFRNILKDEAFWTNPRRSILEAYERTDQAILSHSPDLGRGGSTAVTAILINGRKLWVANVGDSRAVLSRRGQAEQMTIDHEPNTDRVSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIKDADINEETDLLILASDGIWKVMSNQEAVDIGRKTKDPAKAAKQLVSEALNRESKDDISVVVVRFAG 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 26878457 26893615 + BLOR07182 Blo15g00788 71188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00788 377 Pfam Protein phosphatase 2C 136 368 IPR001932 -
Blo15g00788 377 SMART PP2C_SIG_2 139 375 IPR001932 -
Blo15g00788 377 Gene3D - 123 377 IPR036457 -
Blo15g00788 377 SUPERFAMILY PP2C-like 124 375 IPR036457 -
Blo15g00788 377 ProSiteProfiles PPM-type phosphatase domain profile. 128 375 IPR001932 -
Blo15g00788 377 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 107 376 - -
Blo15g00788 377 CDD PP2Cc 127 375 IPR001932 -
Blo15g00788 377 PANTHER PROTEIN PHOSPHATASE 2C 107 376 IPR015655 GO:0004722|GO:0006470
Blo15g00788 377 SMART PP2C_4 116 373 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00764 Blo-Chr14:22841536 Blo15g00788 Blo-Chr15:26878457 2.17E-106 dispersed
Blo15g00788 Blo-Chr15:26878457 Blo01g01641 Blo-Chr1:56219899 9.26E-41 dispersed
Blo15g00788 Blo-Chr15:26878457 Blo11g00033 Blo-Chr11:266677 1.51E-130 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00788 K17506 - csv:101214223 462.611