Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00791 ATGGTGCGCTGGAATCGGTCCCCCAATCATAGCAAGAAGACAATGAACTGCGTGAGCAAACGGAAGGTGAGAAATCTGTTGATCAATAACTGTAAGATCAGAAGAACAGATCCAGCAACTCCAGCCGTTGGATCCATCAGACTTTCTTTTTCTGCTCTTTTAAAAGCCCCTCTTCCACTCCTTGCTCTCTGTCTCTCTCTAACACACCCCAGGCGATCTTCCTTTCTCTTTCACGCCACACAAACAGTGTCTCTGAGAGAGAGCCCTTATCCCGCGCTTCTTGCTTATCTCTTAGCGCCCATTGGAGGAACTCAACTCAATGAATCTCGCATTTGGCGCACCAAGGGCCTCATTGGCGGCAAATGGACTGATGCGTATGATGGGAAGACCATTAAGACTGCCATCAAAGTGAATAACTGTTCACTAAGCTCAGCTGAAGAGCAAAGAAAAATGGTTTTTGTGATAAAGATGTTTGGTTATCCAGCTCAGTTGGAGCACTATTCCTCCTTGTCGTACAGATATTGTATCCTCATTGATTCGTCATCGTTCCCATTTTCATATGTTTACAATCCGGCGAATGGGGAGGTTGTAGCAGATGTCGCGTGTATGGGTGGTAGGGAGGCGGATGATGCTATCGCTTGCGCCGCTGAGGCTTTTAAGACTTGGGGAAAGCTTACAGGACTTGAAAGGAGCAAACGTCTGAGGAGATGGTTTGACTTACTGATTGCACACAAGGAAGAGCTTGGCCAACTCATAACTTTAGAGCAAGGAAAGCCTCTTAAAGACGCCATTGGCGAGGTCGTCTTTGGAGCAAGCTACATTGAGTTTTTCGCAGAGGAAGCTAAACGAGTTTATGGTGATATAATTCCATCTACATTAGCCGATCGCCGTGTCCTGATCTTAAGACAGCCAGTTGGAGTTGTGGGTGCAATTACACCATGGAACTTTCCTTTGGCTATGATTGCTCGGAAGGTTGGTCCTGCTCTTGCATGTGGCTGCACTATCGTCATAAAACCCTCTGAACTTACACCTCTCACGGCCTTAGCAGCTGCTGAGCTCTCTCTTCAGGCTGGAATTCCCCCGGGTGTTGTGAATGTGGTCATGGGAATTGCTCCTGAAATTGGGAAGGCTTTACTTGCCAGCAAAGAGGTAAGAAAGATTACTTTTACTGGCTCAACAGCAGTGGGGAAGATGTTGATGGCTGGTTGTGCAGACACCGTTAAAAAGGTGTCTCTGGAGCTTGGTGGGAATGCACCTTGCATTGTGTTTGATGATGCAGACATTGAGGTTGCAATAAAAGGAACTCTTGGTGCAAAGTTCCGAAACACTGGACAAACTTGTGTCTGCGCCAACAGGATTTTTGTTCAAGAAGGCATATACGATAAGTTTGCTGCTGCATTAACGAAAGAAATCCGGAATCTGCGAGTAGGAGATGGCTTTGGTGAAGGAGTGGTTCTGGGTCCTCTCATTAATGAAGCTGCAATTCAGAAGGTTGAAACATTTATTCAAGATGCTGTCTCTAAGGGAGCAAAAGTTCTTCTGGGGGGCCGAAGGCATAGGCTTGGAATGACCTTTTATGAGCCGACGGTTCTTAAGGAGGTCAAGAACGACATGCGGATAGCCAGAGATGAAGTATTTGGTCCTGTCGTACCTTTATTGCGGTTTAAAACTGAGGAGGAAGTCATTTCGCTTGCTAACGATACCAACGCAGGTTGGTTGGCTGCTTACGTATTCACGACAAATGTCCAACGATCTTGGCGTTTGACTGAATCTCTTGATTACGGCATTGTTGGTGTCAATGAAGGACTCATTTCTACAGAGGTAGCTCCATTCGGAGGCTTTAAACAATCAGGGCTTGGTCGGGAAGGTTCGAAATACGGGATGGATGACTATCTGGAGGCCATGAAGATTATAAATTTCTTCACTGCTCTCTCTGTCAGAAAAGATTGGACCGGAACCCTTTCTATGCTTGTGTTGATTGCAAATTTTATATTCACAAATCCTGTGCTAATCTTCCGGTTGAGATCCAACATCATTTTCATCAACCACACCTTCTTTCATTATGCCTTGCAAGCTCCTTTGCTTGTGATTCTTGCCATAAGACATTCCATAATGAGGTCTGCATTTTGTCAATTTTCTGAAGAATCAAGTGAATTCGAGCGTACTAAATCATACTCACTACGATGCATCCAATGTGACTACAATCTTCATCTTTTATGTGGTCCTTTGCCTTGCACCATCAAACACAAAAGCCATCTTCATGTTTTGACACTAGTGGACTCCATGGCTGAAGATGATTCTGACGACCAATATTGTGATACATGCGAGGAGATAAGAAATCCCAGATTATGTGTCTACTACTGCAAAGATTGTAAATTTATTTCTCACGTTCATTGTGTACTATCCGAGATTATAAATTCAATGAAGAAAAGCCTTGAGAAAGTTGAGTTGAGAATTGGGAGGGACTTCAATCATACAGAGAACATAGAACTGTCGGATAACAATGTAACTAGAGAGAAATTGACGTTAATGGATCTACTCAATTCTTTAAGTGAAGGTGATCTGACTTTGTTGGAATGGGTTTTTCCTGGTGCAAAACTTTATGTAAGAGATGAAAATGCAACGTGGATTTTTCTAGAACACAAATCAAGTTCTGAAGAGGATGCAATTGACATTATGGAAGAGCTTTCTCTGTACAATGATGATATCTTTCTCAACATTGAGAATAGATTAAAATGTTTTAAACTGGACACAAAATTTCATATTCAACAAGATGAATGTGAACTGCCAATAGTTGAAGTCAAAGGTTACAAGGTCACTTCTAATTTTGTCTCTCTTTTTAGAGCTTTATTGATGAAACACGGTGACATCGGCTATAATAATTTTAGAGCCATGAGCAATGTCAGGTCCATTTTGCTTTATTTTCTTTGTCGCGTACTAAGTGACATGCGTAGAACCTATATTGCCGACATTACTGAGAAGCAGCTTTTCACTTGGTTTTACTACTTGGACCGAATAAGCAAATTTTCTTTTGACTTAAGTTTTGTGGGACCTTTACGAGAAAGGGTTATGAGATCTTACTTTGGTCTTCGGGCAATGAATTTTGAGAATGAAGCTGTTGGCAGATTGGATTGTGAGATTGTGAATGTTGATAAAAAGATTTTTGAGCTGAAAACTAAAAGAGAAGAACTAGAAAAGCATCGACAACAACACAAGTCTGGTAAGATAGCAGAGGAATCGGCAGTCATGAGGGAGTTAATCACCGAGGCCAAGAAGCTAAAATGGGAAAGAGCTGGTGATGGTTTTTTTTAA 3312 42.39 MVRWNRSPNHSKKTMNCVSKRKVRNLLINNCKIRRTDPATPAVGSIRLSFSALLKAPLPLLALCLSLTHPRRSSFLFHATQTVSLRESPYPALLAYLLAPIGGTQLNESRIWRTKGLIGGKWTDAYDGKTIKTAIKVNNCSLSSAEEQRKMVFVIKMFGYPAQLEHYSSLSYRYCILIDSSSFPFSYVYNPANGEVVADVACMGGREADDAIACAAEAFKTWGKLTGLERSKRLRRWFDLLIAHKEELGQLITLEQGKPLKDAIGEVVFGASYIEFFAEEAKRVYGDIIPSTLADRRVLILRQPVGVVGAITPWNFPLAMIARKVGPALACGCTIVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGIAPEIGKALLASKEVRKITFTGSTAVGKMLMAGCADTVKKVSLELGGNAPCIVFDDADIEVAIKGTLGAKFRNTGQTCVCANRIFVQEGIYDKFAAALTKEIRNLRVGDGFGEGVVLGPLINEAAIQKVETFIQDAVSKGAKVLLGGRRHRLGMTFYEPTVLKEVKNDMRIARDEVFGPVVPLLRFKTEEEVISLANDTNAGWLAAYVFTTNVQRSWRLTESLDYGIVGVNEGLISTEVAPFGGFKQSGLGREGSKYGMDDYLEAMKIINFFTALSVRKDWTGTLSMLVLIANFIFTNPVLIFRLRSNIIFINHTFFHYALQAPLLVILAIRHSIMRSAFCQFSEESSEFERTKSYSLRCIQCDYNLHLLCGPLPCTIKHKSHLHVLTLVDSMAEDDSDDQYCDTCEEIRNPRLCVYYCKDCKFISHVHCVLSEIINSMKKSLEKVELRIGRDFNHTENIELSDNNVTREKLTLMDLLNSLSEGDLTLLEWVFPGAKLYVRDENATWIFLEHKSSSEEDAIDIMEELSLYNDDIFLNIENRLKCFKLDTKFHIQQDECELPIVEVKGYKVTSNFVSLFRALLMKHGDIGYNNFRAMSNVRSILLYFLCRVLSDMRRTYIADITEKQLFTWFYYLDRISKFSFDLSFVGPLRERVMRSYFGLRAMNFENEAVGRLDCEIVNVDKKIFELKTKREELEKHRQQHKSGKIAEESAVMRELITEAKKLKWERAGDGFF 1103
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 27024539 27033337 + BLOR07185 Blo15g00791 71191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00791 1103 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 187 639 - -
Blo15g00791 1103 SUPERFAMILY ALDH-like 183 634 IPR016161 GO:0016491
Blo15g00791 1103 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 188 633 IPR010102 GO:0009013|GO:0009450
Blo15g00791 1103 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 440 451 IPR016160 GO:0016491
Blo15g00791 1103 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 416 606 IPR016163 GO:0016620
Blo15g00791 1103 Coils Coil 1047 1070 - -
Blo15g00791 1103 Pfam Aldehyde dehydrogenase family 187 635 IPR015590 GO:0016491
Blo15g00791 1103 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 187 639 - -
Blo15g00791 1103 CDD ALDH_F5_SSADH_GabD 188 633 - -
Blo15g00791 1103 SUPERFAMILY Cysteine-rich domain 724 802 IPR046349 -
Blo15g00791 1103 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 412 419 IPR029510 GO:0016491
Blo15g00791 1103 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 188 631 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00869 Blo-Chr2:33613475 Blo15g00791 Blo-Chr15:27024539 0 dispersed
Blo05g00037 Blo-Chr5:317619 Blo15g00791 Blo-Chr15:27024539 7.41E-51 dispersed
Blo13g00203 Blo-Chr13:8401545 Blo15g00791 Blo-Chr15:27024539 1.09E-17 dispersed
Blo14g00489 Blo-Chr14:6331403 Blo15g00791 Blo-Chr15:27024539 9.27E-11 dispersed
Blo15g00637 Blo-Chr15:16738301 Blo15g00791 Blo-Chr15:27024539 3.75E-136 dispersed
Blo15g00639 Blo-Chr15:16753312 Blo15g00791 Blo-Chr15:27024539 4.58E-106 dispersed
Blo15g00791 Blo-Chr15:27024539 Blo16g01155 Blo-Chr16:40075129 2.45E-97 dispersed
Blo15g00791 Blo-Chr15:27024539 Blo01g00398 Blo-Chr1:4515469 3.39E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00791 K17761 - dcr:108200251 717.998