Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00012 ATGCAGAGGTGCAGGTCGTTTGGAGGCGAGAACGGGCATAATGTGGCACTCCTCATTGCAGGGTTACACAAGAGCTCCTTCTCGCGAGGTTGCGTTGGAGCTTCATCTGTGTATTCAGTAGACCGTTTGTGTTCGTGGAAGACAGGCCGATTGCCCTCTCACACATTCTGGCCAGATCATGTTGAGATTCTTGAAGTACTCACGGTTTGTGACTTTATACAGGATGAAGACATAAAGAACGCAATTGAAGATGCTGGATTCGAAGCAGAGATACTGCCTGAACCAACTACTTTTGGAGCAAAACCTCATGGAAACCTGTTGGGGCAGTTCACTATAGGAGGGATGACATGTGCAGCATGTGTGAACTCTGTTGAAGGGATTTTAAGAAATCTTCCTGGTGTTAAAAAGGCAGTGGTAGCCTTAGCGACTTCTTTAGGGGAAGTTGAGTACGATCCGACTGTAATTAGTAAAGATGATATTGTGGAGGCAATAGAAGAAGCGGGCTTTGAAGCTTCACTTGTACGCAGTAGTGAGCAGGATAAACTAATGCTGGGGGTTTCTGGTGTATTTTGTGAGATAGATGCACAATTTTTGGAAGGCGTACTCATCAACCTGAATGGGGTGAGACAATTTCGTTTTGACAGGATATCAAGGGAATTGGAAGTTGTTTTTGACCCCGAGGTGGTCAATTCTAGATCCTTAGTGGATGGGATTGAGGGAGGAAGCAATGGGAAGTTGAAATTACATGTCTTAAGCCCCTATAGCAGAATGACTACCAAAGACGTTGCGGAAACCTCTACTATGTTTCGGCTATTCACTTCCAGTTTGTTTCTCAGTATTCAAGTCTTTTTCATATGGGTAATTTGTCCGCACATTCCTCTATTGTACTCCTTGATACTCTGGAGATGTGGGCCTTTCCTTATGGAAGATTGGTTGAAGTGGGCTTTGGTGAGTGTAGTTCAATTTGTGATTGGAAAGCGATTTTACATTGCAGCTTTTAGAGCTCTGCGAAATGGTTCAACTAACATGGATGTATTAGTTGCCTTGGGTACTTCAGCCTCTTATTTCTACTCTGTTGGTGCACTTCTATATGGAGCAGCTACTGGGTTTTGGTCTCCCACCTACTTTGAAACAAGTTCCATGCTAATTACATTTGTATTATTGGGAAAGTATTTGGAGTGTCTTGCTAAGGGGAAAACATCAGATGCCATCAAGAAGTTGGTAGAACTTGCCCCTGCAACTGCTTTATTGGTCGTGAAAGATAAAGATGGGAAGTTGATTGAAGAGAGGTTAATAGATGCTTTGCTCATTCAGCCTGGTGACACATTGAAAGTTCTTCCTGGTGCAAAAATTCCAGCTGATGGTGTGGTTGTCTGGGGATCGAGTTATGTTAATGAGAGTATGGTAACAGGTGAATCTATACCTATTTTAAAGGAGCTCGACTCTCCAGTTATTGGAGGTACATTTAATTTGCATGGTGCTCTTAATATAGAAGCAAAGAAAGTAGGGTCTGATACAGTTTTGAACCAGATCATTAGTCTGGTTGAGGCAGCACAGATGTCGAAAGCTCCGATTCAGAAATTTGCAGATTTTGTAGCAAGCATCTTTGTTCCGATGGTTGTTGCTATGGCATTATTTACGCTGTTGGGTTGGTATATTGGTGGAATTCTTGGAGCATACCCTAATAACTGGCTCCCTGAGAATGGAAACTACTTTGTATTTGCGCTAATGTTTTCCATATCGGTTGTCGTGATTGCTTGTCCTTGTGCACTTGGTTTGGCCACACCAACTGCTGTCATGGTCGCATCTGGGGTTGGGGCTAATAACGGTGTGTTAATCAAAGGAGGAGATGCTTTAGAGAGAGCACAGAAGGTAAAATATGTGATATTCGATAAAACAGGCACTCTTACCCAGGGAAAGGCCACTGTTACAACGGCCAAAGTCTTCACAGGAATGGATCGGGGAGAATTTCTCAAATTGGTGGCTTCTGCTGAGTCTAGCAGTGAACACCCATTGGGGAAAGCTATAGTTGAATATGCTCGCCATTTCCATTTCTTTGATGAGCCGTCTGCAACCACGAAGTCCAACCACAGCACACAGCCTTCTGGATGGCTTTTTGATTTCTCAAATTTCTCAGCTCTGCCGGGAAGAGGGGTTCAATGTTCCATTGATGGAAAATGGGTTTTGGTTGGTAACAGGAAGTTGATGAATGACAGTGGAATAACAATAGCGCCTCATGTTGAGAGTTTTGTTGTTGAGCTGGAAGAAAGTGCAAAGACGGGGATACTTGTGGGGTACGATGGTAACTTGATCGGTGTGTTGGGAGTAGCAGATCCTTTAAAGAGAGAAGCTGCTGTGGTCATAGAGGGACTTAACAAAATGGGTGTCATTCCGGTAATGGTTACTGGGGATAATTGGAGAACTGCTGGTGCTGTTGCCAAGGAGGTTGGTATTGGAGATGTAAGGGCAGAAGTAATGCCTGCAGGAAAGGCTGAAGTTATTCGCTCATTCCAAAAGGATGGAAGCGTAGTTGCGATGGTGGGCGATGGAATCAACGACTCTCCTGCTCTAGCTGCTGCTGACATAGGCATGGCAATTGGGGCAGGAACTGATGTCGCCATTGAAGCTGCCAATTATGTTTTGATGAGAAATAACTTGGAAGATGTAATCACAGCCATTGATCTTTCAAGAAAGACCTTGTCTCGGATTCGATTGAATTACATGTTTGCCATGGCCTATAACGTGATTGCGATTCCAGTTGCAGCAGGAGTATTTTTCCCGTCCTTGGGGATAAAGTTGCCTCCGTGGGCTGCAGGTGCGTGCATGGCTCTGGGCGGGGGGAGGGCCTTGAATGAGTTTTATGTCCCCAGTTCTTGTATATTAGCTTTCTTGGATGTTTTATTGAATACTGTGGTAGACGTGAGAAGGGATTTCCTTCTTTTATTCATTGGTAATGAAATGATAATGCATGAAGTGGAAGAGGATGCATTTTCCGTGGAGCCTGCGGTGTATCCGAATGAATCACGACTTGAGTAG 3036 44.14 MQRCRSFGGENGHNVALLIAGLHKSSFSRGCVGASSVYSVDRLCSWKTGRLPSHTFWPDHVEILEVLTVCDFIQDEDIKNAIEDAGFEAEILPEPTTFGAKPHGNLLGQFTIGGMTCAACVNSVEGILRNLPGVKKAVVALATSLGEVEYDPTVISKDDIVEAIEEAGFEASLVRSSEQDKLMLGVSGVFCEIDAQFLEGVLINLNGVRQFRFDRISRELEVVFDPEVVNSRSLVDGIEGGSNGKLKLHVLSPYSRMTTKDVAETSTMFRLFTSSLFLSIQVFFIWVICPHIPLLYSLILWRCGPFLMEDWLKWALVSVVQFVIGKRFYIAAFRALRNGSTNMDVLVALGTSASYFYSVGALLYGAATGFWSPTYFETSSMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKDGKLIEERLIDALLIQPGDTLKVLPGAKIPADGVVVWGSSYVNESMVTGESIPILKELDSPVIGGTFNLHGALNIEAKKVGSDTVLNQIISLVEAAQMSKAPIQKFADFVASIFVPMVVAMALFTLLGWYIGGILGAYPNNWLPENGNYFVFALMFSISVVVIACPCALGLATPTAVMVASGVGANNGVLIKGGDALERAQKVKYVIFDKTGTLTQGKATVTTAKVFTGMDRGEFLKLVASAESSSEHPLGKAIVEYARHFHFFDEPSATTKSNHSTQPSGWLFDFSNFSALPGRGVQCSIDGKWVLVGNRKLMNDSGITIAPHVESFVVELEESAKTGILVGYDGNLIGVLGVADPLKREAAVVIEGLNKMGVIPVMVTGDNWRTAGAVAKEVGIGDVRAEVMPAGKAEVIRSFQKDGSVVAMVGDGINDSPALAAADIGMAIGAGTDVAIEAANYVLMRNNLEDVITAIDLSRKTLSRIRLNYMFAMAYNVIAIPVAAGVFFPSLGIKLPPWAAGACMALGGGRALNEFYVPSSCILAFLDVLLNTVVDVRRDFLLLFIGNEMIMHEVEEDAFSVEPAVYPNESRLE 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 707425 722395 - BLOR07260 Blo16g00012 71203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00012 1011 PRINTS Copper-transporting ATPase 1 signature 326 351 - -
Blo16g00012 1011 PRINTS Copper-transporting ATPase 1 signature 107 132 - -
Blo16g00012 1011 PRINTS Copper-transporting ATPase 1 signature 133 156 - -
Blo16g00012 1011 PRINTS Copper-transporting ATPase 1 signature 162 182 - -
Blo16g00012 1011 Pfam E1-E2 ATPase 410 608 - -
Blo16g00012 1011 ProSitePatterns Heavy-metal-associated domain. 112 141 IPR017969 GO:0046872
Blo16g00012 1011 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 343 944 IPR027256 GO:0006812|GO:0016021|GO:0019829
Blo16g00012 1011 PRINTS P-type cation-transporting ATPase superfamily signature 629 643 - -
Blo16g00012 1011 PRINTS P-type cation-transporting ATPase superfamily signature 794 804 - -
Blo16g00012 1011 PRINTS P-type cation-transporting ATPase superfamily signature 465 479 - -
Blo16g00012 1011 PRINTS P-type cation-transporting ATPase superfamily signature 870 882 - -
Blo16g00012 1011 PRINTS P-type cation-transporting ATPase superfamily signature 772 783 - -
Blo16g00012 1011 PRINTS P-type cation-transporting ATPase superfamily signature 847 866 - -
Blo16g00012 1011 SUPERFAMILY HMA, heavy metal-associated domain 109 177 IPR036163 GO:0046872
Blo16g00012 1011 SFLD Haloacid Dehalogenase 611 899 - -
Blo16g00012 1011 PANTHER HEAVY METAL P-TYPE ATPASE 65 945 - -
Blo16g00012 1011 ProSitePatterns E1-E2 ATPases phosphorylation site. 631 637 IPR018303 -
Blo16g00012 1011 SUPERFAMILY HAD-like 628 943 IPR036412 -
Blo16g00012 1011 SUPERFAMILY HMA, heavy metal-associated domain 179 239 IPR036163 GO:0046872
Blo16g00012 1011 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 382 681 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo16g00012 1011 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 746 929 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo16g00012 1011 SUPERFAMILY Calcium ATPase, transduction domain A 430 515 IPR008250 -
Blo16g00012 1011 Gene3D - 596 904 IPR023214 -
Blo16g00012 1011 Pfam haloacid dehalogenase-like hydrolase 625 861 - -
Blo16g00012 1011 ProSiteProfiles Heavy-metal-associated domain profile. 181 239 IPR006121 GO:0046872
Blo16g00012 1011 PANTHER ATP7, ISOFORM B 65 945 - -
Blo16g00012 1011 Gene3D - 397 519 - -
Blo16g00012 1011 CDD HMA 109 172 IPR006121 GO:0046872
Blo16g00012 1011 Pfam Heavy-metal-associated domain 110 170 IPR006121 GO:0046872
Blo16g00012 1011 CDD P-type_ATPase_Cu-like 270 944 - -
Blo16g00012 1011 Gene3D - 108 174 - -
Blo16g00012 1011 ProSiteProfiles Heavy-metal-associated domain profile. 107 173 IPR006121 GO:0046872
Blo16g00012 1011 SUPERFAMILY Calcium ATPase, transmembrane domain M 365 929 IPR023298 -
Blo16g00012 1011 Gene3D - 636 726 IPR023299 GO:0000166
Blo16g00012 1011 Gene3D - 727 778 IPR023299 GO:0000166
Blo16g00012 1011 SFLD p-type atpase 611 899 IPR044492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00012 Blo-Chr16:707425 Blo19g00320 Blo-Chr19:20753187 0 dispersed
Blo16g00012 Blo-Chr16:707425 Blo01g01443 Blo-Chr1:53333028 7.48E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00012 K17686 - qsu:111997171 1450.26