Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00033 ATGAGTATATCTCTTAACTCTGCTAATGAAATGGAAGGTTGTGCCATGACATTTGAGACGGAGTATGGACAGTGGGTGGAAGAGCGAAGCAGGCAGAAAGGTGAATTTAGGACAGCCCTTCGTTCAGATATAACCGATTTAGAGCTACGAATAATGGTGGAAAATGGGATGAGGCATTATTTGGATCTATTTCGCATGAAAGCAAGAGTAGCAAAGGCTGATGTTTTCTATGTCATGAATGGCATGTGGAAAACTTCAACCGAAAGACTTTTCTTGTGGATTGGAGGTTCTCGTCCTTCCGAGCTTCTCGAGATACTCGCACCTCAGCTCGATGCGTTAACCGAACCGCAAGTTGTCGATGTTCACAACCTTCAAAGGTCTTGTAAGAAGTCTGAAGAAGCTCTTCTGCAAGGCATGGAAACACTTCGTCAGGGTCTCATTGATGTAGTGGCTGGCCAACTAGCTGAAGGGAGTCATCCTCTTTGGTCGGAAACTGCGATGGAGAGGCTAGAAGATCTAGTTAGCTTCGTTAATCAGGCTGACCATCTACGGCACGAATCATTGCAGCAAATGTACAAAATCCTAACGACGAGACAATCTGCTCAGGGGCTGCTCGTTTTGGGAGAGTATTTCCAACGTCTTCGAGCAATAAGTTCATTTTCGTCCAATCGTCCTCACAACTCCACCTAG 690 45.51 MSISLNSANEMEGCAMTFETEYGQWVEERSRQKGEFRTALRSDITDLELRIMVENGMRHYLDLFRMKARVAKADVFYVMNGMWKTSTERLFLWIGGSRPSELLEILAPQLDALTEPQVVDVHNLQRSCKKSEEALLQGMETLRQGLIDVVAGQLAEGSHPLWSETAMERLEDLVSFVNQADHLRHESLQQMYKILTTRQSAQGLLVLGEYFQRLRAISSFSSNRPHNST 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1730888 1731856 + BLOR07281 Blo16g00033 71224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00033 229 Pfam Seed dormancy control 35 107 IPR025422 GO:0006351|GO:0043565
Blo16g00033 229 PANTHER TRANSCRIPTION FACTOR TGA1 9 227 - -
Blo16g00033 229 ProSiteProfiles DOG1 domain profile. 15 224 IPR025422 GO:0006351|GO:0043565
Blo16g00033 229 PANTHER TRANSCRIPTION FACTOR TGA9 9 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00033 Blo-Chr16:1730888 Blo18g00208 Blo-Chr18:2044278 4.41E-66 dispersed
Blo16g00033 Blo-Chr16:1730888 Blo04g00933 Blo-Chr4:11047633 6.33E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00033 K14431 - csv:101208419 289.271