Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00037 ATGGATGATCAAACTGAGTATCAGATGGCAGCTATTGCACAGTTCTACAGCCCGAGATCTACCCAGTTGCCATCTCAACAAGGAGTAGCAGAGGCAGTCAAGCCAAAGCGACGACGTAGGAAGGTGAGAGGCGGGGGAGGAGAAGAAGGATCGGGAAAGAAGAGGACGCTGAGCGCGGAGCAAGTGAATTTTCTGGAAATGAACTTCGGGAACGAACACAAGCTGGAGTCGGAAAGGAAAGATGAGTTAGCTATGAAACTGGGTCTTGATCCTCGACAAGTGGCTGTGTGGTTTCAGAATCGGAGGGCGCGGTGGAAGAACAAGAAGCTCGAGGAAGAATACTCCCTTTTGAAGAATGCTCATGAATATGCTCTCCTTGATAAATGCCGTCTTGAATCGGAGATAATGAAGCTGAGAGAGCAAGTGGCAGAAGCGGAGAAGGAGATGCAAAGGCTGTGTAATGCTGTGAGCGGCGACAATGGAGGTTCAAGCAACAGTCCAAGCTCGTCGCTGTCGGTGGAAGAAGCCGTAGCGTTGGGGGAATTCGGGGTGGAAGGCTTCGAAGACGTCTTCTACATGCCTGTACAGAAGAACAGCTACAATCAGGGAGTGGAATGGTTGCCTCACCATCTCTGCATCTGA 642 50.62 MDDQTEYQMAAIAQFYSPRSTQLPSQQGVAEAVKPKRRRRKVRGGGGEEGSGKKRTLSAEQVNFLEMNFGNEHKLESERKDELAMKLGLDPRQVAVWFQNRRARWKNKKLEEEYSLLKNAHEYALLDKCRLESEIMKLREQVAEAEKEMQRLCNAVSGDNGGSSNSPSSSLSVEEAVALGEFGVEGFEDVFYMPVQKNSYNQGVEWLPHHLCI 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1764352 1765164 + BLOR07285 Blo16g00037 71228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00037 213 Pfam Homeodomain 53 107 IPR001356 GO:0003677
Blo16g00037 213 Gene3D - 44 115 - -
Blo16g00037 213 ProSitePatterns 'Homeobox' domain signature. 83 106 IPR017970 GO:0000981|GO:0006355
Blo16g00037 213 SMART HOX_1 51 112 IPR001356 GO:0003677
Blo16g00037 213 SUPERFAMILY Homeodomain-like 53 117 IPR009057 -
Blo16g00037 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 6 207 - -
Blo16g00037 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 6 207 IPR045224 GO:0003700
Blo16g00037 213 CDD homeodomain 53 109 IPR001356 GO:0003677
Blo16g00037 213 Coils Coil 100 120 - -
Blo16g00037 213 PRINTS Lambda-repressor HTH signature 88 104 IPR000047 GO:0003677
Blo16g00037 213 PRINTS Lambda-repressor HTH signature 79 88 IPR000047 GO:0003677
Blo16g00037 213 MobiDBLite consensus disorder prediction 18 57 - -
Blo16g00037 213 Coils Coil 128 155 - -
Blo16g00037 213 ProSiteProfiles 'Homeobox' domain profile. 48 108 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00125 Blo16g00037 CCT
Blo04g00927 Blo16g00037 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00037 Blo-Chr16:1764352 Blo11g00670 Blo-Chr11:7393266 2.01E-23 dispersed
Blo06g00125 Blo-Chr6:5047383 Blo16g00037 Blo-Chr16:1764352 1.95E-45 transposed
Blo16g00037 Blo-Chr16:1764352 Blo04g00927 Blo-Chr4:10974191 5.30E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13358 PF00046 Homeodomain 3.60E-18 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00037 K09338 - csin:114281220 209.149