Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00050 ATGGCTGAGCTGACGTTCCTAGTCGCCGCCTTAAGTCCAGAAGCTTCGCTGAGAATTCACGCCCAGATAGAGATAGTGTCCGGCGCTTATTTTGACAATGTCGGAGGGAAGACCGGGCACCTCGAGCAAATTTTTAGTGGCAGGTATTCGGGTATGGCATTTGCGAGTGGGAACAAAGAAACTGCTACTTTAGGAGTGCGAGTGACTGAAGGTGAAGGAAATTTACCAAAGGTCGTACTCACTTCCTCCAGCGATAGTGAGGCTGATATATACTTATATGGAGGATGCATTACATCTTGGAAAGTTGGAAATGGCAAGGATTTGCTCTTTGTCCGCCCTGATGCTGTCTTCAACAAGCAAAAACCAATCAGTGGAGGCATTCCGCATTGTTTTCCGCAGTTCGGACCTGGCCCTATGCAGCAGCATGGATTTGCAAGAAACGTTGATTGGTCCGTCCTAGACTCTGAAAACGTAGAAGGTAACCCGGTTGTAACTCTACAACTCAAGGATAGCTCTTACAGTCGTTCCATGTGGGATTTCAGCTTCCAAGTTCTATATAAGATTATTCTGAGTGAGAAGACCCTTTCCACCAAACTAATCGTCACAAACACTGACGAGAAGCCGTTCTCTTTTACGACTGCCTTGCACACATATTTCCGAGCTTCTGTTGGAGGGGCAGTTGTTAAAGGCCTGAAAGGCTGTAAGACGCTAAACAAAGACCCAGATCCCAAAAATCCACTGGAGAGTATGGAAGAAAGATATGTTGTCGATTTTCCCGGATTCGTGGATTGTGTATATCTTGATGCCCCTAATGAGTTGAAGTTAAATAATGGCTTGGGCGATACGATATCCATTAGGAACACAAATTGGTCGGATGCTGTTCTGTGGAATCCACATCTACTCATGGAAGCTTGCTACAAGGATTTTGTTTGTGTCGAGAACGCTAAGATTGGAAAGGTGGAGTTGCTGCCTCAACAATCTTGGACAGCTACACAAGATCTTAGCCTTGCCTGA 1014 45.66 MAELTFLVAALSPEASLRIHAQIEIVSGAYFDNVGGKTGHLEQIFSGRYSGMAFASGNKETATLGVRVTEGEGNLPKVVLTSSSDSEADIYLYGGCITSWKVGNGKDLLFVRPDAVFNKQKPISGGIPHCFPQFGPGPMQQHGFARNVDWSVLDSENVEGNPVVTLQLKDSSYSRSMWDFSFQVLYKIILSEKTLSTKLIVTNTDEKPFSFTTALHTYFRASVGGAVVKGLKGCKTLNKDPDPKNPLESMEERYVVDFPGFVDCVYLDAPNELKLNNGLGDTISIRNTNWSDAVLWNPHLLMEACYKDFVCVENAKIGKVELLPQQSWTATQDLSLA 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1899421 1902807 + BLOR07298 Blo16g00050 71241

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00050 337 Pfam Aldose 1-epimerase 77 334 IPR008183 GO:0005975|GO:0016853
Blo16g00050 337 SUPERFAMILY Galactose mutarotase-like 76 334 IPR011013 GO:0003824|GO:0005975|GO:0030246
Blo16g00050 337 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 45 336 - -
Blo16g00050 337 CDD D-hex-6-P-epi_like 86 335 IPR025532 -
Blo16g00050 337 Gene3D - 73 336 IPR014718 GO:0030246
Blo16g00050 337 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 45 336 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00050 K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] - zju:107424654 496.508
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00649 Blo-Chr11:6771315 Blo16g00050 Blo-Chr16:1899421 2.55E-13 dispersed
Blo16g00050 Blo-Chr16:1899421 Blo10g00439 Blo-Chr10:8126678 1.17E-31 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g989 . Blo16g00050 . . . Bpe13g00440 . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0817 . . . . . Chy07g01232 . . . Bda11g01861 . . . . Bma06g00118 . . . . . . . . Cpe14g00477 . . . . . . . . . . . . . . . Csa04g00577 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010275 1 3 1 0 1 1 1 1 1 1 0 1 0 1 1 1 1 2 1 1 1 0 1 1 1 0 1 2 3 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00050 Blo_Chr16 FPKM 38.401981 41.247219 33.452019 31.401865 84.881302 81.354698 75.394226 15.957098 16.125418 13.90167