Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00051 ATGAATGATCTGATGACGAAATCGTTCCTCAGTTATGTGGAATTGAAGAAACAGTCGATGAAAGACGATTACGACATTGAAATGGGCCAACTCGATCTTTCTGACGAACAAAATCTCTTAAGGTTCTTCCAAGAAGTTGGCCGAATCAAAACCGAAATAGAAGAGATCTCCAATCTCTTGATCGAACTCAAAACACTCAATGAGGAGGCGAAGTCCATTTTCAGCGCCAAGATTCTTTGCGGGCTGAGAGATCGAATGGATTCAAACATGGTTTTGATCCTCCGCAAAGCAAAGATTGTCAAGTCGGGTCTAGACTCGCTCGATCGATCCAATGTAGAAAATAGAAGAATTTCAGAAGGCTTTAAGGAAGGCAGTCCTGTTGACAGAACCAGGATTTCCATCACAAATGGGATAAGAGTCAAGCTGCGGACGTACTACACAGCAACAGGCGAGCAACTAAGTGAGGAAATGATCGAGAAGATAGCCATGGGAGGCGAGAGAATTGAACTATTTCAGGACAAAAAAGATAACGGAGAGAGAAATGACGCCATTTTAGACATTCCGAGAAGCTTGAACAAACTTCATCAAGTATTTCTCGACATGGCCGTGCTGGTCGAGAATCAAGGAGAAAAAATGGATGACATTGAGGAGAATGTGGTCAATGCAGGAAGTTTCATCAATGGCGGAACAAACAGTCTTCACTACGCTAATCAGACGAAGAAGAAGAAGGAGAAGAGCAAGAAATGGGCTTACTGGGTTGCGGCCGTTGTACTTACCATAACCCTGGCTTGCTTCATTGCAACCTTAGTTTCTTGA 816 43.26 MNDLMTKSFLSYVELKKQSMKDDYDIEMGQLDLSDEQNLLRFFQEVGRIKTEIEEISNLLIELKTLNEEAKSIFSAKILCGLRDRMDSNMVLILRKAKIVKSGLDSLDRSNVENRRISEGFKEGSPVDRTRISITNGIRVKLRTYYTATGEQLSEEMIEKIAMGGERIELFQDKKDNGERNDAILDIPRSLNKLHQVFLDMAVLVENQGEKMDDIEENVVNAGSFINGGTNSLHYANQTKKKKEKSKKWAYWVAAVVLTITLACFIATLVS 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1903083 1903967 - BLOR07299 Blo16g00051 71242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00051 271 Coils Coil 49 69 - -
Blo16g00051 271 Gene3D - 34 161 - -
Blo16g00051 271 PANTHER SYNTAXIN 143 267 IPR045242 -
Blo16g00051 271 PANTHER SYNTAXIN 4 143 IPR045242 -
Blo16g00051 271 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 174 236 IPR000727 -
Blo16g00051 271 SUPERFAMILY t-snare proteins 39 229 IPR010989 GO:0016020|GO:0016192
Blo16g00051 271 CDD SNARE_syntaxin1-like 179 233 - -
Blo16g00051 271 Pfam Syntaxin 41 144 IPR006011 GO:0016020
Blo16g00051 271 SMART tSNARE_6 168 236 IPR000727 -
Blo16g00051 271 SMART SynN_4 34 158 IPR006011 GO:0016020
Blo16g00051 271 Gene3D - 170 271 - -
Blo16g00051 271 PANTHER SYNTAXIN-112 143 267 - -
Blo16g00051 271 PANTHER SYNTAXIN-112 4 143 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00912 Blo16g00051 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00703 Blo-Chr15:22339372 Blo16g00051 Blo-Chr16:1903083 6.66E-95 dispersed
Blo16g00051 Blo-Chr16:1903083 Blo08g00183 Blo-Chr8:2085505 1.12E-45 dispersed
Blo16g00051 Blo-Chr16:1903083 Blo04g00912 Blo-Chr4:10701857 5.74E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00051 K08486 - jre:108997509 339.347