Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00074 ATGCGGGCTCTTTGCGACTCTTGTGAAAGTGCACCTGCAACTGTATTTTGCTCCGCCGACGAGGCTGCCCTCTGCCGCGCCTGTGACGAGAAGGTTCATTTGTGTAATAAGCTAGCCAGCCGACATATAAGAGTAGGACTAGCGAGTCCCAGCGATGTTCCTCAGTGTGATATATGCGAAAATGCTCCTGCTTTCTTCTACTGTGAGGTAGATGGCAGTTCCCTTTGTTTGCAGTGTGATACAGTTGTTCACGTTGGAGGTAAAAGAACTCACAAAAGATACCTTATGTTGAGGCAGAGAGTCGAGTTTCCAGGCGATGAACCCAGAAGTTTTGATGATCCAGTTCCACCAGCCACCGATGGCGGTGAGGCGAAACGGCTACGAAATCAACCGCCCAAAGTTACGGAGGCAGAGAACCGGCAAAATGATCGTCGTTCAGCTGATCCAAATGATATTGAGGAGGGGCATAATGAGACAGACAGTAAAATGATTGATCTGAATATGAAGCCTCTTCGGATTCCTGGGCAAGCTTCGAATGATCAGGTAAGCTTGCACTGCTTCGATTTAGAACATGATCCAAATTCTTCAGAAGCAACACTGCCGAACAATGGTGTGCGACTCTCGCAAGGCCAGTTCGCAAATGGAACCTCTAATGTTCATCCCCTTTCCATTCTGTTCAAGCAGATCGTCTTGTTCATCGACTGTCTGGAATTTCTGCTTCTGATCTTACTTGAGTCGGAGAAGTTGGTAGAAAAGCCACAGACTTTTCCAAGGAGAATATTCGATCATGGTGTTCTTGAATGA 804 47.01 MRALCDSCESAPATVFCSADEAALCRACDEKVHLCNKLASRHIRVGLASPSDVPQCDICENAPAFFYCEVDGSSLCLQCDTVVHVGGKRTHKRYLMLRQRVEFPGDEPRSFDDPVPPATDGGEAKRLRNQPPKVTEAENRQNDRRSADPNDIEEGHNETDSKMIDLNMKPLRIPGQASNDQVSLHCFDLEHDPNSSEATLPNNGVRLSQGQFANGTSNVHPLSILFKQIVLFIDCLEFLLLILLESEKLVEKPQTFPRRIFDHGVLE 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2107024 2108998 - BLOR07322 Blo16g00074 71265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00074 267 CDD Bbox1_BBX-like 4 47 - -
Blo16g00074 267 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 184 - -
Blo16g00074 267 SMART bboxneu5 1 47 IPR000315 GO:0008270
Blo16g00074 267 SMART bboxneu5 51 96 IPR000315 GO:0008270
Blo16g00074 267 Gene3D Classic Zinc Finger 2 95 - -
Blo16g00074 267 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Blo16g00074 267 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 184 - -
Blo16g00074 267 MobiDBLite consensus disorder prediction 105 161 - -
Blo16g00074 267 CDD Bbox1_BBX-like 56 96 - -
Blo16g00074 267 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Blo16g00074 267 MobiDBLite consensus disorder prediction 126 161 - -
Blo16g00074 267 Pfam B-box zinc finger 4 34 IPR000315 GO:0008270
Blo16g00074 267 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00321 Blo16g00074 CCT
Blo06g00321 Blo16g00074 ECH
Blo04g00894 Blo16g00074 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00321 Blo-Chr6:18407264 Blo16g00074 Blo-Chr16:2107024 7.89E-85 transposed
Blo01g01583 Blo-Chr1:55642228 Blo16g00074 Blo-Chr16:2107024 6.15E-18 wgd
Blo16g00074 Blo-Chr16:2107024 Blo18g00789 Blo-Chr18:22814417 2.19E-20 wgd
Blo16g00074 Blo-Chr16:2107024 Blo04g00894 Blo-Chr4:10317171 1.14E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13367 PF00643 zf-B_box 1.40E-07 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00074 - - csv:101208899 273.863