Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00081 ATGGCGGCTGCTGTTACTGCCGCAGTTTCTCTCCCTTCCTCTAAGTCCGCCTCTCTTCCCTCCAGAACCTCTATTGCCTCACCGGATAGAATTCCTTTCTTCCTCAGAGATGTCTCCGCCAGTGCGAGAGTGGTTTCCGTCAAAGCTCAGGTTACCACTGAGGCTCCGGCTAAGGTTGAGAAGGAATCTAAGAAAATGGAGGAAGGAGTAATCGTTAACAAATTCAAGCCAAAAAATCCATACACAGGAAGATGCCTTCTAAACACTAAGATTACAGGCGAAGACGCTCCCGGAGAAACATGGCACATGGTTTTCAGCACAGAAGGTAGAGAAGTTCCATATAGAGAAGGACAATCGATTGGGGTGATTGCTGATGGTGTAGACAAGAATGGGAAGCCTCACAAATTGAGATTGTACTCCATTGCTAGCAGTGCCCTTGGTGACTTTGGAGACTCCAAAACTGTTTCTCTATGCGTAAAACGCCTTGTTTACACCAATGACCAAGGAGAGATTGTCAAAGGAGTCTGCTCAAACTTCTTATGTGATCTAAAGCCTGGAGATGAAGTGAAGATAACAGGCCCTGTTGGCAAAGAAATGCTTATGCCGAAAGATCCTAATGCCACCGTAATCATGCTTGGAACCGGAACTGGGATTGCTCCATTCCGGTCGTTCTTGTGGAAAATGTTGTTCGAGAAGCACGAAGATTATAAGTTCAATGGTCTTGCTTGGCTTTTCTTGGGTGTTCCGACGAGCAGCTCACTGCTCTACAAGGAGGAGTTTGAGAAGATGAAAGAGAAGGCCCCAGACAACTTCAGGCTCGACTTTGCCGTCAGCAGAGAGCAGGCAAACGCAAAGGGGGAGAAAATGTACATTCAAACGAGAATGGCAGAGTATGCAGAAGAACTATGGGAATTGCTCAAGAAAGACAACACCTTTGTCTACATGTGTGGACTCAAAGGAATGGAGAAAGGAATCGACGATATCATGGTCGACTTGGCTGCCAAAGACGGCTTGGATTGGGTGGAGTACAAGAGGCAACTGAAGAAAGCAGAGCAATGGAACGTGGAAGTCTACTGA 1077 46.7 MAAAVTAAVSLPSSKSASLPSRTSIASPDRIPFFLRDVSASARVVSVKAQVTTEAPAKVEKESKKMEEGVIVNKFKPKNPYTGRCLLNTKITGEDAPGETWHMVFSTEGREVPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGDEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMLFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQANAKGEKMYIQTRMAEYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVDLAAKDGLDWVEYKRQLKKAEQWNVEVY 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2206795 2208739 + BLOR07329 Blo16g00081 71272

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00081 358 CDD CYPOR_like_FNR 73 358 - -
Blo16g00081 358 Gene3D Translation factors 48 195 - -
Blo16g00081 358 MobiDBLite consensus disorder prediction 9 23 - -
Blo16g00081 358 PIRSF FNR-PetH 12 358 IPR035442 GO:0016491
Blo16g00081 358 SUPERFAMILY Riboflavin synthase domain-like 56 202 IPR017938 -
Blo16g00081 358 PANTHER - 1 358 IPR015701 GO:0016491
Blo16g00081 358 Gene3D - 196 358 IPR039261 -
Blo16g00081 358 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 358 - -
Blo16g00081 358 MobiDBLite consensus disorder prediction 1 23 - -
Blo16g00081 358 Pfam Oxidoreductase FAD-binding domain 110 197 IPR008333 -
Blo16g00081 358 PIRSF Frd-NADP+_RD 1 358 IPR015701 GO:0016491
Blo16g00081 358 Pfam Oxidoreductase NAD-binding domain 211 325 IPR001433 GO:0016491
Blo16g00081 358 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 204 358 IPR039261 -
Blo16g00081 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 240 249 IPR001709 GO:0016491
Blo16g00081 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 210 229 IPR001709 GO:0016491
Blo16g00081 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 174 183 IPR001709 GO:0016491
Blo16g00081 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 114 124 IPR001709 GO:0016491
Blo16g00081 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 252 263 IPR001709 GO:0016491
Blo16g00081 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 137 144 IPR001709 GO:0016491
Blo16g00081 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 288 304 IPR001709 GO:0016491
Blo16g00081 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 312 320 IPR001709 GO:0016491
Blo16g00081 358 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 78 201 IPR017927 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00081 K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2] - gmx:100802032 637.106
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00258 Blo-Chr8:3287388 Blo16g00081 Blo-Chr16:2206795 2.45E-82 dispersed
Blo16g00081 Blo-Chr16:2206795 Blo08g00470 Blo-Chr8:10680406 1.32E-12 dispersed
Blo16g00081 Blo-Chr16:2206795 Blo14g00447 Blo-Chr14:5286266 8.29E-95 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1118 . Blo16g00081 . . . Bpe13g00414 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag1685 Cone9ag1607 . . . . . . Bda11g01835 . . . . Bma06g00095 . . . . . . . . . . . . . . . . . . . . . . . Lsi07g01103 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009581 1 0 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 2 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00081 Blo_Chr16 FPKM 14.590164 8.87766 3.930891 3.015548 0.0 3.385612 2.267661 1.619821 0.0 1.296408