Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00087 ATGTTTTGTGATATTTTGGAGAGTAATGGCGGAAAAGTAGTCGATTGTCAGATTGAAATCTCTGAATGCTCTTCCCCTCTGACCAATCCAATGGCTACTCCTGTGAGGAGGGTGTTTGACAGAATATCGGGTCTCGCAAGAACTCTACGGAGGAGCGAAGCTGCTCGAGGAAGATCACTCTTTCACAGAGATGTTGAGCAGCAAGAATTTCAGTATGCCAGCACTCATTGTCTCTCCTCCTACTACAGTGTCTTTGCAGCTCGCCTTGCTATAATGGTCATGTTGGCGATTTTGATTGGACTGTTAACGCTATTGCATTGGCATTTCACGAAGATCTACACCGCAGAGTCTCTGGATAGCTTAGCATATGGCGTTCGGCATGAGCTTCTCCAGCGCCCCATTCTACGAATGTGGAGCATCTTGAACTCGACTTCTGAAATAACAACAGCCCAAGTTAAACTCTCAGAATACGTGATTCGGAAGTATGACAAGCCTGCAACTCAAGCACAAGAAATCGAGTTGTATGAAGCGATGAAGGATCTAACTTGGGCGCTATTTGCGAGTCAAAAAGCTCTGAATGCCATTACGATCAATTACCGAAATGGATTTGTCCAGGCATTTCATAGAGATCATAGGAGCAATAATACATTCTATATTTACTCTGATCTTGCCAACTATTCCATCAGTGCTACTGAATCTTATAACATTAACAGACTGCCATCAGATCAAGGCTGGTCCGTCCATCCGATTCATGGCAATGTTTCTGCAATCTGGTATCGTGAGCCACTTGATCCTGTCAGTGGCGAAAAGATTGGAAAAGCCAGGCCAATCCCACCTGAGGATTTGATTAATATTGCCGGAATTTTGCAAGTGGCCGATGGTGTAGCCTCTTGGCATGTGACTGTCAGCAAGTATATGGATTCCCCTTTGCTTTCGGCTGCTTTGCCGGTCTCGGACCCTTCAAACAAAACGATTGTAGCTGTTGTGGGTGTCACCACTGCACTTTCGAGTGTTGGCCAGCTGATGAAAGAACTTGTCGAATTTCATAGTGGCCATATTTATCTGACATCTCAAGAGGGTTATTTGCTAGCCACTTCAGCCAATGCTCCGCTTTTGACGAAGACGATCAATGGGCCGAAGCTTATGATGGCTGTTGATTCCGAGGATGACATGATTCGATTGGGCGCCGAGTGGCTGCAGAAAAATTACGGCAACAAGTTTCCTCCGAATCACGAGGTTCATGCTGAGAATATCAAACTAAATCGCCATAAATATTATGTCGACTCGTTTTTCCTCAAGTTAAAACGACTTCCAATTGTTGGAGTCGTTATCGTTCCGAGAAAACACATAATGGGGAAGGTGGACGAGAGAGCTTTGAAAACATTGGTGATTCTCATATCGGCATCGTTGTGTATCTTAGTCGTCGGATGTGTCTGCATTTTCATTTTGACTAATGGAGTATCCAAGGAAATGGATCTAAGAGCACAATTGATAAGCCATCTGAATGCAAGAAGAAGGGCTGAGGCATCTAACAACTACAAAAGTCAATTTCTAGCAAACATGAGTCACGAGTTACGGACGCCAATGGCTGCAGTAATTGGACTGTTGGACATTCTTATTTGTGATGATTGCATTACAAATGAACAATATGCTACAGTTTCCCAGATAAGGAAATGCTCCACAGCTCTACTCCGTCTGCTAAACAACATATTGGACTTGAGCAAGGTTGAATCTGGAAAATTAGTGCTGGAAGAAGCCGAGTTTGACCTGAGACGGGAACTTGAAGGGCTTGTCGACATGTTTTCTGTGCAGTGCATTAACCACAACGTAGAGACTGTCTTAGATCTATCTGATGATATGCCAAAATTAGTTCGGGGAGATTCCGGTCGAGTTGTTCAAATATTTGCAAATTTAATCAGCAATTCTATCAAGTTTACAGCTTCTGGTCATATTGTTATTCGCGGGTGGTGTGAGAGCTCGAGCTTGAGCTCTTCGAATGAAAGCGGCAAGTTTTCGTTTGAGCAGAAGAGCAAATGGGAGTCTGTCTTTGAAAGCTTTGAGCAAGCCGACCCCTCGACAACCCGCACGCATGGAGGCACGGGTCTCGGACTATGCATCGTACGAACCCTGGTTGACAAGATGGGTGGAGAAATCAAGGTTGTGAAGAAGAATGGTCCAGGAACTTTAATGCAACTGTACTTAGTTCTGAGTACTCCTGCAGAATCCTCGGAGCAACTCCAGCAACTAGATTATTCGAAGCATAACTTGGGGTTATTGATTGCGTTAAGAGGTAAAATGAGTCGATTAATCATGTCCCAATGGCTTCGAAAAGTTGGACTTCTCACAGTGGAAGCGTCTGAGTGGAACGATCTAACTCTAATTCTTCAGGAGCTGTTTCGAGCCAGGAATTCGAATCAGAGTAATGGTTTTGAGACAAATGGGTCGCTTAATGGATCTTTCAGGGCTGGATTGTTTAATGTTCAGAACGCTAGAAATGGGATCTTCATCACTTTTGTCGATATCGGCCTACTGGACCTGGGTACAGATATCTGGAAGGAACAGCTCAACTTCCTCGACAGATATTCGGGGAAAACTAAGTTTGCGTGGATGCTGAATCATGATACCTCGAATGCGATAAAGATGGAGCTTCGAAGAAAAGGACACTTGTTGATGATCAACAAGCCTCTGTACAAGGCGAAAATGGTTCAGATTCTGGAAGCTGTGATTAAGGAGAAAAGTGCTGAAGTGTCGAAGAGAAGCTTGAATGATCTGCAAACTTCGTCCAAGGAAGGTGATTTTTACGAATGCCTTGAGATCGATTCTCATTTCGAAATCTGCAGCTCGGACGATTCCGATGTATCGGAAATGGGTCCTTCCAACTCGGAATCTGCAGTTCGAGTCGGAGAAAAACAGAGGGATGTGATTGAAACGCCATTTCAGGGAGACAACAATTGCCTCGTAGAATTAACTCATGTGTCCTCCAAGGAAAGTGATTCCACTTCGACAAATCAGGTGCCCCTTTCATCGGAAAACCATGATTGCCAAGAACAAAGTTTGGCGAAAGAACGCGGCGAATCGTATTCGAAACCGGAACATTGTCAAAAATCTCTCCTAGGAGTACAGATTCTGCTCGCAGAAGATAATCCAGTACTCCAGAGAGTGACGACTATAATGCTCGAAAAAATGGGAGCTGCAGTTGTTGCCGTGGGAGACGGATTACAGGCGGTAGACGCTCTGACGTCAACGCTAGACGGAGAAGAAAATTGGAGGGATTGCCCGGCCAAACCCGGCAGCGCCGCCCCATATGACTTGATCTTAATGGACTGTCAAATGCCGAAGATGGATGGATACGAAGCAACGAAAGCAATCAGGAAATCGGAAGCCGGAAGTGGGTTTCACATTCCGATAGTCGCTCTGACGGCGCATGCAATGTCGTCGGACGAAGCAAAGTGCTTGGAAGTAGGCATGGACGCTTATTTAACGAAGCCGATCAATTACAAGTTGATGGTGTCCACCATTCTTTCTCTCACTAAAAGAACACCTTCTCTGTCTTCCTGA 3558 44.88 MFCDILESNGGKVVDCQIEISECSSPLTNPMATPVRRVFDRISGLARTLRRSEAARGRSLFHRDVEQQEFQYASTHCLSSYYSVFAARLAIMVMLAILIGLLTLLHWHFTKIYTAESLDSLAYGVRHELLQRPILRMWSILNSTSEITTAQVKLSEYVIRKYDKPATQAQEIELYEAMKDLTWALFASQKALNAITINYRNGFVQAFHRDHRSNNTFYIYSDLANYSISATESYNINRLPSDQGWSVHPIHGNVSAIWYREPLDPVSGEKIGKARPIPPEDLINIAGILQVADGVASWHVTVSKYMDSPLLSAALPVSDPSNKTIVAVVGVTTALSSVGQLMKELVEFHSGHIYLTSQEGYLLATSANAPLLTKTINGPKLMMAVDSEDDMIRLGAEWLQKNYGNKFPPNHEVHAENIKLNRHKYYVDSFFLKLKRLPIVGVVIVPRKHIMGKVDERALKTLVILISASLCILVVGCVCIFILTNGVSKEMDLRAQLISHLNARRRAEASNNYKSQFLANMSHELRTPMAAVIGLLDILICDDCITNEQYATVSQIRKCSTALLRLLNNILDLSKVESGKLVLEEAEFDLRRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQIFANLISNSIKFTASGHIVIRGWCESSSLSSSNESGKFSFEQKSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVDKMGGEIKVVKKNGPGTLMQLYLVLSTPAESSEQLQQLDYSKHNLGLLIALRGKMSRLIMSQWLRKVGLLTVEASEWNDLTLILQELFRARNSNQSNGFETNGSLNGSFRAGLFNVQNARNGIFITFVDIGLLDLGTDIWKEQLNFLDRYSGKTKFAWMLNHDTSNAIKMELRRKGHLLMINKPLYKAKMVQILEAVIKEKSAEVSKRSLNDLQTSSKEGDFYECLEIDSHFEICSSDDSDVSEMGPSNSESAVRVGEKQRDVIETPFQGDNNCLVELTHVSSKESDSTSTNQVPLSSENHDCQEQSLAKERGESYSKPEHCQKSLLGVQILLAEDNPVLQRVTTIMLEKMGAAVVAVGDGLQAVDALTSTLDGEENWRDCPAKPGSAAPYDLILMDCQMPKMDGYEATKAIRKSEAGSGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINYKLMVSTILSLTKRTPSLSS 1185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2245073 2250107 + BLOR07335 Blo16g00087 71278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00087 1185 CDD REC_hyHK_CKI1_RcsC-like 1042 1173 - -
Blo16g00087 1185 Gene3D - 501 580 - -
Blo16g00087 1185 Gene3D - 581 740 IPR036890 -
Blo16g00087 1185 Pfam His Kinase A (phospho-acceptor) domain 514 579 IPR003661 GO:0000155|GO:0007165
Blo16g00087 1185 ProSiteProfiles Histidine kinase domain profile. 520 738 IPR005467 -
Blo16g00087 1185 MobiDBLite consensus disorder prediction 949 969 - -
Blo16g00087 1185 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 736 IPR003594 -
Blo16g00087 1185 MobiDBLite consensus disorder prediction 992 1028 - -
Blo16g00087 1185 CDD HisKA 514 575 IPR003661 GO:0000155|GO:0007165
Blo16g00087 1185 ProSiteProfiles Response regulatory domain profile. 1041 1177 IPR001789 GO:0000160
Blo16g00087 1185 PANTHER TWO-COMPONENT HISTIDINE KINASE 31 675 - -
Blo16g00087 1185 Gene3D PAS domain 309 457 - -
Blo16g00087 1185 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 568 735 IPR036890 -
Blo16g00087 1185 Gene3D - 1018 1179 - -
Blo16g00087 1185 SMART HKATPase_4 626 738 IPR003594 -
Blo16g00087 1185 SMART HisKA_10 513 579 IPR003661 GO:0000155|GO:0007165
Blo16g00087 1185 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 500 580 IPR036097 GO:0000155|GO:0007165
Blo16g00087 1185 MobiDBLite consensus disorder prediction 992 1014 - -
Blo16g00087 1185 SMART REC_2 1040 1173 IPR001789 GO:0000160
Blo16g00087 1185 PRINTS Bacterial sensor protein C-terminal signature 681 691 IPR004358 GO:0016310|GO:0016772
Blo16g00087 1185 PRINTS Bacterial sensor protein C-terminal signature 698 716 IPR004358 GO:0016310|GO:0016772
Blo16g00087 1185 SUPERFAMILY CheY-like 1041 1179 IPR011006 -
Blo16g00087 1185 Pfam Response regulator receiver domain 1042 1171 IPR001789 GO:0000160
Blo16g00087 1185 PANTHER OSMOSENSOR HISTIDINE KINASE 31 675 - -
Blo16g00087 1185 PANTHER OSMOSENSOR HISTIDINE KINASE 676 1178 - -
Blo16g00087 1185 PANTHER TWO-COMPONENT HISTIDINE KINASE 676 1178 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00878 Blo16g00087 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00531 Blo-Chr11:4911356 Blo16g00087 Blo-Chr16:2245073 4.34E-26 dispersed
Blo12g00277 Blo-Chr12:16640388 Blo16g00087 Blo-Chr16:2245073 1.10E-14 dispersed
Blo16g00087 Blo-Chr16:2245073 Blo01g00697 Blo-Chr1:8359868 5.03E-24 dispersed
Blo16g00087 Blo-Chr16:2245073 Blo04g00878 Blo-Chr4:9852386 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13369 PF00072 Response_reg 3.80E-21 CL0304 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00087 - - cmo:103490686 1697.18