Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00106 ATGTCGTCGTTGCATTCGCATTACGAGGACGACGACGACGGCTCTTTATCGGAACCCACGGTGTCTGAACAACAGCCGGTTCCTCTCCTGGCGGAGCCCTCGACTGAACCATCGCCCTCATCGACCGAATCTGAGCTTGAAGAGAAGCCTTGTACTTCATCTCCATTGTCGAAACCTGCTCCTCCGACTCCTTCGGAGATCCCTCTCTCGTGGCCATCAGATGGTAAACTTAGCATCCAATGGATTCTCAATCTAACCGCCTCTTTCGAATGGTCTTCCAGAAATTTGCCTCCCTCCGATTTTCCCTCTGTTCTTCCGGTTTCTGTGTTTGATAGTCTGGTTCTCGCTGCCTCTAAGATTCTCCATAAGGAACCCAATTGCCTGACAATTCTTGACGATTTTGTCGAAAGCAGCAGCGACGCGGTTGTGGTGGTCGTTGGGGATATTCATGGCCAGTTGCATGATCTCCTCTTTCTCTTTCAAGACGCAGGCTTTCCTTCTGAGAACCGCTTCTTTGTCTTCAATGGCGATTACGTTGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTGATTTTATTGGCTTGGAAGGTTTTTATGCCACATCGAGTATTTCTTCTTCGAGGAAACCATGAATCGAAGTATTGCACATCTGTTTATGGATTTGAAAAGGAAGTGCTGGAAAAATATGGAGACAAAGGTAAGCATGTTTATCGAAAGTGTTTGGGATGCTTTGAAGGGCTGCCTTTGGCCTCCATCATTGCCGGAAATGTTTATACGGCTCATGGGGGGCTTTTCCGCAGTGTAACAGTGCCCACATCAAAGAGATCAAAAGGAAAGAAGAATCGTAAAATAATCGTGAATTCTGAAGCTAACTCTATATCTCTTGGTTCTTTGGAAGAACTGCAGAAGGCTAGGCGATCGGTTCTTGATCCTCCCTGGGAAGGTTTAAATTTGATTCCCGGCGATGTTCTTTGGTCTGATCCATCAATGGATCCTGGTCTTTCTCCAAATAAAGAGAGAGGCATAGGCTTGTTGTGGGGCCCTGATTGCACTGAAGAGTTCTTGAAGAAATTTCAACTCAAGTTGATTATCAGATCTCATGAAGGTCCTGACGCCCGAGAAAAGAGGCCTGGTCTTTCAGGGATGCAGGAAGGCTACACCATAGATCATGTTGTTGGGTCAGGGAAGCTAATTACCTTGTTCAGTGCTCCAGACTACCCTCAGTTTCAGGCTTCCGAGGAAAGGTACAAAAACAAAGGCGCGTATATTGTTTTGGAGGCCCCGAACTTTGATGTTCCGGAATTTCATAGTTTTGAAGCAGTCACTCCTAGGCCGAAGGCGAATCCCTATTATGACTATGTAGATGTAATCGATTCGGACGAAGAGTTGGACTTAACATCGATGGTAACTGATCCA 1416 46.33 MSSLHSHYEDDDDGSLSEPTVSEQQPVPLLAEPSTEPSPSSTESELEEKPCTSSPLSKPAPPTPSEIPLSWPSDGKLSIQWILNLTASFEWSSRNLPPSDFPSVLPVSVFDSLVLAASKILHKEPNCLTILDDFVESSSDAVVVVVGDIHGQLHDLLFLFQDAGFPSENRFFVFNGDYVDRGAWGLETFLILLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLEKYGDKGKHVYRKCLGCFEGLPLASIIAGNVYTAHGGLFRSVTVPTSKRSKGKKNRKIIVNSEANSISLGSLEELQKARRSVLDPPWEGLNLIPGDVLWSDPSMDPGLSPNKERGIGLLWGPDCTEEFLKKFQLKLIIRSHEGPDAREKRPGLSGMQEGYTIDHVVGSGKLITLFSAPDYPQFQASEERYKNKGAYIVLEAPNFDVPEFHSFEAVTPRPKANPYYDYVDVIDSDEELDLTSMVTDP 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2475957 2479738 - BLOR07354 Blo16g00106 71297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00106 472 Pfam Calcineurin-like phosphoesterase 143 370 IPR004843 GO:0016787
Blo16g00106 472 CDD MPP_PP7 71 452 IPR041754 -
Blo16g00106 472 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 48 468 - -
Blo16g00106 472 SUPERFAMILY Metallo-dependent phosphatases 103 450 IPR029052 -
Blo16g00106 472 MobiDBLite consensus disorder prediction 18 51 - -
Blo16g00106 472 ProSitePatterns Serine/threonine specific protein phosphatases signature. 206 211 IPR006186 GO:0016787
Blo16g00106 472 MobiDBLite consensus disorder prediction 1 69 - -
Blo16g00106 472 SMART pp2a_7 105 442 IPR006186 GO:0016787
Blo16g00106 472 Gene3D - 102 466 IPR029052 -
Blo16g00106 472 PRINTS Serine/threonine phosphatase family signature 396 412 IPR006186 GO:0016787
Blo16g00106 472 PRINTS Serine/threonine phosphatase family signature 172 199 IPR006186 GO:0016787
Blo16g00106 472 PRINTS Serine/threonine phosphatase family signature 242 268 IPR006186 GO:0016787
Blo16g00106 472 PRINTS Serine/threonine phosphatase family signature 302 329 IPR006186 GO:0016787
Blo16g00106 472 PRINTS Serine/threonine phosphatase family signature 142 169 IPR006186 GO:0016787
Blo16g00106 472 PRINTS Serine/threonine phosphatase family signature 205 229 IPR006186 GO:0016787
Blo16g00106 472 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 48 468 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00106 Blo-Chr16:2475957 Blo15g00595 Blo-Chr15:13586194 2.06E-42 dispersed
Blo16g00106 Blo-Chr16:2475957 Blo04g00862 Blo-Chr4:9490541 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00106 K04460 - csv:116402529 745.732