Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00107 ATGATGAAGTGGGAAAACCCTGAAGAATTTCATTCCCGTCCTCATAGGTCACTGCGAGAAGATGTTTCACAGATGGAGGAACCTCAACATGGCAATGGGAATCGAGGGGTTTTGTACTTGAAGGTGATGACTGACGAGCAATTAGAGACTCTTCGCAAGCAAATCGCTGTTTACGCCTCCATTTGCGACCAGCTCGTGGAGATGCATAAAACCCTCACTTCCCAGCAGGATCCTTCAGGAATCAGGCTTGGTAGCTTATATTGTGAGCCATTAATGGCTTCTTCTGGCCACAAAATCACTTCAAGACAGCGATGGACTCCAACCCCTGTTCAGCTTCAGATTCTTGAGCGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGCAGAAAATAAAAGAGATAACATCCGAACTGATCCAGAACGGCCAAATTTCTGAAACAAATGTCTACAATTGGTTCCAGAACAGGCGAGCTCGATCAAAGAGGAAACAACAAAATTCAGCCCCAGTTAATGCCGAATCAGAAGCCGAGACTGATAATGAGTCGCCAAATGAAAACGAGATGAAACGAATGGATTTTCAATCCAAACAGAACAACCCTACGTCCATGGCTGATGATCTGCGATTCCAGATCACTGAGAGCGGCGCTGATTTTCCTTTTTTAGATGGAAGAATCAACAAAGCTGAGATTTTGATTCCCTCGAATGGAACTGTAAAAAATGGGAGAAATTTGGGTCAAATGTCGTTTTACGAGGATGATGAACATCTGATAGGAAAACTGGAAATGATGGAGAACTACAATTTGTATCAGCAATCAGAAGAATACAGCTTGACTGGGTGA 840 43.33 MMKWENPEEFHSRPHRSLREDVSQMEEPQHGNGNRGVLYLKVMTDEQLETLRKQIAVYASICDQLVEMHKTLTSQQDPSGIRLGSLYCEPLMASSGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELIQNGQISETNVYNWFQNRRARSKRKQQNSAPVNAESEAETDNESPNENEMKRMDFQSKQNNPTSMADDLRFQITESGADFPFLDGRINKAEILIPSNGTVKNGRNLGQMSFYEDDEHLIGKLEMMENYNLYQQSEEYSLTG 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2484489 2486263 - BLOR07355 Blo16g00107 71298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00107 279 SMART HOX_1 100 167 IPR001356 GO:0003677
Blo16g00107 279 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 278 IPR044559 GO:0003700
Blo16g00107 279 ProSiteProfiles 'Homeobox' domain profile. 98 163 IPR001356 GO:0003677
Blo16g00107 279 PANTHER - 2 278 - -
Blo16g00107 279 CDD homeodomain 102 164 IPR001356 GO:0003677
Blo16g00107 279 MobiDBLite consensus disorder prediction 1 26 - -
Blo16g00107 279 Gene3D - 104 168 - -
Blo16g00107 279 MobiDBLite consensus disorder prediction 1 33 - -
Blo16g00107 279 Pfam Homeodomain 102 162 IPR001356 GO:0003677
Blo16g00107 279 MobiDBLite consensus disorder prediction 158 187 - -
Blo16g00107 279 SUPERFAMILY Homeodomain-like 100 165 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00107 Blo-Chr16:2484489 Blo01g00756 Blo-Chr1:10156514 4.88E-13 dispersed
Blo16g00107 Blo-Chr16:2484489 Blo16g00114 Blo-Chr16:2683378 4.74E-13 proximal
Blo01g01638 Blo-Chr1:56208171 Blo16g00107 Blo-Chr16:2484489 4.43E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13370 PF00046 Homeodomain 2.20E-18 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00107 - - qsu:112005537 351.288