Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo16g00116 | ATGGATAGGCTGTTGGGGTTGCTTAGGGTCAGAGTCAAACGCGGCATTAATCTGGCGGTTCGGGACGTCCGGAGCAGCGATCCATACGTAGTCGTCAGGATGGGCAAACAGATAAAATTGAAGACTCGAGTTATTCACAAAGATGTAAATCCACAATGGAACGAAGATCTAACTCTCTCTGTCACAGACCCTAATCTTCCAGTCAAGCTGATAGTGTATGATCACGACACGTTCAGCATGGATGACAAGATGGGGGAAGCAGAATTCGACATTAAAGCGTATGTAGAAGCATTGAAGATGAACTTGGGAGCGGTTCCGAGTGGGACGGTAATCTCGAAAGTTCGACCGAACCGACAAAATTGTTTGGCGGAAGAGAGCTCTGTGGTGTGGAAGGACGGGAAAGTCGTTCAAGACCTTTGCCTCAGGCTCAAAAATGTTGAATCAGGTGAAGTTGAGATTCTACTGCAATGGATTGACCTTCCCGGTTCGAAGGGCTTATAG | 501 | 47.31 | MDRLLGLLRVRVKRGINLAVRDVRSSDPYVVVRMGKQIKLKTRVIHKDVNPQWNEDLTLSVTDPNLPVKLIVYDHDTFSMDDKMGEAEFDIKAYVEALKMNLGAVPSGTVISKVRPNRQNCLAEESSVVWKDGKVVQDLCLRLKNVESGEVEILLQWIDLPGSKGL | 166 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 2719330 | 2720010 | + | BLOR07364 | Blo16g00116 | 71307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo16g00116 | 166 | Gene3D | C2 domain | 3 | 164 | IPR035892 | - | |
| Blo16g00116 | 166 | CDD | C2_ArfGAP | 5 | 149 | - | - | |
| Blo16g00116 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE | 1 | 165 | - | - | |
| Blo16g00116 | 166 | Pfam | C2 domain | 6 | 93 | IPR000008 | - | |
| Blo16g00116 | 166 | SMART | C2_3c | 7 | 103 | IPR000008 | - | |
| Blo16g00116 | 166 | ProSiteProfiles | C2 domain profile. | 1 | 104 | IPR000008 | - | |
| Blo16g00116 | 166 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 151 | IPR035892 | - | |
| Blo16g00116 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 165 | IPR044562 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo06g01009 | Blo-Chr6:33326549 | Blo16g00116 | Blo-Chr16:2719330 | 1.89E-48 | dispersed | |
| Blo13g00173 | Blo-Chr13:6154958 | Blo16g00116 | Blo-Chr16:2719330 | 9.32E-79 | dispersed | |
| Blo15g00058 | Blo-Chr15:456595 | Blo16g00116 | Blo-Chr16:2719330 | 9.70E-61 | dispersed | |
| Blo16g00116 | Blo-Chr16:2719330 | Blo17g00457 | Blo-Chr17:6050322 | 1.76E-82 | dispersed | |
| Blo01g00755 | Blo-Chr1:10103826 | Blo16g00116 | Blo-Chr16:2719330 | 1.20E-65 | transposed | |
| Blo16g00116 | Blo-Chr16:2719330 | Blo04g00845 | Blo-Chr4:9218314 | 3.49E-101 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo16g00116 | - | - | mnt:21400368 | 283.108 |