Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00131 ATGACGGTGAGAGCACCTTCAACCCCAGCTTCAAAGATTGAGAAGACACCAGCATCAACCCCAGGAGGACCAAGGGCTAAGGAAGAGAAGATTGTGGTTGCAGTAAGGTTAAGGCCTCTAAGCAAAAAAGAGCAATTAGCTAAAGACCAAGTAGCATGGGACTGTGCAGATGATCATACAATTGTGTATAAACCAATTGCTCAAGACCGTTCTTCTCAACCTGCCTCATTTTCATTCGACAAAGTCTACGGCCCAGTTTCTTTGACAGAAACAGTATATGAAGGAATAAAGCATGTTGCATTGTCTGCTTTGATGGGTATCAATGCGACTATATTTGCCTACGGGCAAACCAGCAGTGGAAAAACTTACACAATGAAGGGAATTACTGAAAAAGCTGTTAATGATATCTACGAGCATATAAAGAATACACCCGAAAGAGATTTCACAATTAAAATTTCTGGACTGGAAATTTATAACGAGAATGTTAAGGACCTTTTAAACTCAGAATCTGGTCGCAATCTTAAGCTACTTGATGATCCAGAGAAAGGGACAGTAGTGGAGAAGTTAATAGAGGAAACTGCCAGCAATGATCAGCACTTAAGACAGATGATTAGCATATGCGAGGCTCAAAGGCAAGTTGGTGAAACTGCTTTAAATGACAACAGCTCACGGTCACACCAGATAATAAGGCTGTCGATCCAAAGTGCTCTGCGTGGAAATTCAGATTGTGTGAGATCTTTCGTGGCAAGCTTGAATTTTGTTGATCTAGCTGGAAGTGAAAGAGCCTCCCAGACGCATGCAGATGGCTCTAGGCTAAGAGAAGGCTGCCATATCAACCTTAGCTTGATGACACTTACAACTGTAATCAGAAAGCTCAGCGTTGGAAAAAGAATTGGCCATATACCTTACAGAGACTCAAAGCTTACTCGCATATTGCAGCTCTCTCTTGGTGGAAACGCGCGTACTGCCATCATATGTACTTTAAGTCCAGCTCAAAGCCATTTCGAACAATCTCGAAACACACTCTTCTTTGCTACCCGGGCAAAGGAAGTAACTAACAATGCTCAAGTTAACATGGTTGTCTCAGACAAGCAGCTAGTTAAACATTTGCAGAAGGAAGTGGCGAGACTAGAAGCAGAGCTAAGAACGCCTGATCTATGTAAGGACAAAGATTGGAAAATTCAACAGATGGAGATGGAAATTGAAGAACTGAGACGCCAAAGAGACGAAGCACAATCTGAAGTGGATGAGTTGCGAAAAAACCTTTTGACCGACCAGCAGGTTGTAAATCTAGTTGAATCAACTCATCCTTCTGTGAAGAAGTGTCTCTCCTATACTGATGGACTATCAAAGAAACACGACAGCAAGGACCTTAGTCTTGGTATGGTGATCAGGCAGTCTATGAGGCAATCATCAACTGCTCCTTTCACCCTTATGCATGAAATTCGCAAACTTGAACACCTTCAGGAACAGTTGGGAGAAGAAGCCAATAGAGCCCTGGAAGTTTTACAGAAAGAAGTAGCTTATCATAGGTTGGGGAACCAAGATGCTGCTGTGACAATTGCCAAACTGCAAGAGGAAATGAGAGAAATGCGGGCTGTTCATCCAACGCCTAAAGAAGTTGAATTTGGATGTATGGTTGCTACAAGCGAGAGTGCAAGTGCTAATCTGAAGGAGGAGATAACTAGACTTCATTCAAAGGGAAGCACCATTGCAAATCTTGAAGAGAAACTTGAAAATTTTCAGAAGTCTATTGACAGAATGGTGATGTCTCTTCCGAGTATTTATCCAAATTCAAATGGCAAAGCGACTCCCAAGAAAAAGAATCATTCGAAAAAGAAGAAGCTACTTCCTTTAGCTTCGAGTAATGTCATCAACCAGCAAAATTTAATAAGATTTCCCTGTTCACCTTCATCGATTGCTCGTCAAATTGTTGAATCTGAGATTGAAAATAAAGCTCCAGAAAGAAATGATGTTGTCTCATCTGATACTCTGCCGGAGTCTGAGAAAGAGACTCCAACAAAGAATGGAGAAGGTGGAGATGTATCTTCAAAGGAAGGCACTCCTGGTACTCCTGTTCATCAACGATCAAGTTCTGTAAACATGAAGAAAATGCAGAAGATGTTCCAAAATGCTGCAGAAGAAAATGTAAGAAGCATAAGAGTTTATGTAACGGAACTGAAAGAGCGTGTGGCAAAACTGCAATACCAAAAACAGCTTCTTGTTTGCCAGGTGCTAGAACTGGAAGCAAACGAAGCAGCTGGAAACAATTTTGAGACTGAGGAGAACATGTTCATGACTGTGGAACCGCAGATTCCGTGGCATGTAACATTTCGAGAGCAAAGACAGCGAATCATCGAGCTGTGGGATTTCTGTTATGTCTCCATCATTCACCGGTCTCAATTTTATTTGTTATTCAAAGGCGATCTAGCTGATAAGATTTACTTGGAAGTAGAGCTTAGGCGCTTAACATGGCTGCAACAGCACCTAGAAGAACTTGGCAATGCAAGCCCTGCTCATGTAGGGGATGAGCCAACAATCTCTCTATCATCAAGTATTAGACAATTGAAACGGGAAAGAGAATTTCTCGCTAAACGATTGGCTTCCAGATTAACGGTAGAGGAGAGAGACGCATTGTACATGAAATGGGATGTACCACTTGAAGGAAAGCATAGAAGGATACAATTTGTAAACAAGCTTTGGATGGATCCACATAATCCAAAACATATTCAAGAGAGTGCAGAAATAGTGGCATTGCTTGTAGGTTTCTGTGAAGGTGGAAACATGTCAAAAGAGATGTTTGAGCTCAACTTTGTAGTTCCTTCTGATAAGAGGTCATGGCTAATTGGATGGAATCCAATCTCAAACCTTCTTCACTTG 2880 41.63 MTVRAPSTPASKIEKTPASTPGGPRAKEEKIVVAVRLRPLSKKEQLAKDQVAWDCADDHTIVYKPIAQDRSSQPASFSFDKVYGPVSLTETVYEGIKHVALSALMGINATIFAYGQTSSGKTYTMKGITEKAVNDIYEHIKNTPERDFTIKISGLEIYNENVKDLLNSESGRNLKLLDDPEKGTVVEKLIEETASNDQHLRQMISICEAQRQVGETALNDNSSRSHQIIRLSIQSALRGNSDCVRSFVASLNFVDLAGSERASQTHADGSRLREGCHINLSLMTLTTVIRKLSVGKRIGHIPYRDSKLTRILQLSLGGNARTAIICTLSPAQSHFEQSRNTLFFATRAKEVTNNAQVNMVVSDKQLVKHLQKEVARLEAELRTPDLCKDKDWKIQQMEMEIEELRRQRDEAQSEVDELRKNLLTDQQVVNLVESTHPSVKKCLSYTDGLSKKHDSKDLSLGMVIRQSMRQSSTAPFTLMHEIRKLEHLQEQLGEEANRALEVLQKEVAYHRLGNQDAAVTIAKLQEEMREMRAVHPTPKEVEFGCMVATSESASANLKEEITRLHSKGSTIANLEEKLENFQKSIDRMVMSLPSIYPNSNGKATPKKKNHSKKKKLLPLASSNVINQQNLIRFPCSPSSIARQIVESEIENKAPERNDVVSSDTLPESEKETPTKNGEGGDVSSKEGTPGTPVHQRSSSVNMKKMQKMFQNAAEENVRSIRVYVTELKERVAKLQYQKQLLVCQVLELEANEAAGNNFETEENMFMTVEPQIPWHVTFREQRQRIIELWDFCYVSIIHRSQFYLLFKGDLADKIYLEVELRRLTWLQQHLEELGNASPAHVGDEPTISLSSSIRQLKREREFLAKRLASRLTVEERDALYMKWDVPLEGKHRRIQFVNKLWMDPHNPKHIQESAEIVALLVGFCEGGNMSKEMFELNFVVPSDKRSWLIGWNPISNLLHL 960
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2970456 2981678 - BLOR07379 Blo16g00131 71322

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00131 960 SMART kinesin_4 28 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo16g00131 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 385 IPR027417 -
Blo16g00131 960 MobiDBLite consensus disorder prediction 1 15 - -
Blo16g00131 960 Gene3D Kinesin motor domain 23 381 IPR036961 -
Blo16g00131 960 MobiDBLite consensus disorder prediction 648 676 - -
Blo16g00131 960 ProSiteProfiles Kinesin motor domain profile. 30 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo16g00131 960 MobiDBLite consensus disorder prediction 595 620 - -
Blo16g00131 960 PANTHER CENTROMERE PROTEIN E 14 959 - -
Blo16g00131 960 Coils Coil 485 505 - -
Blo16g00131 960 CDD KISc_CENP_E 30 351 - -
Blo16g00131 960 PANTHER KINESIN-LIKE PROTEIN KIN-7A 14 959 - -
Blo16g00131 960 Pfam Kinesin motor domain 36 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo16g00131 960 Coils Coil 387 428 - -
Blo16g00131 960 MobiDBLite consensus disorder prediction 647 701 - -
Blo16g00131 960 Coils Coil 514 534 - -
Blo16g00131 960 MobiDBLite consensus disorder prediction 1 27 - -
Blo16g00131 960 ProSitePatterns Kinesin motor domain signature. 249 260 IPR019821 GO:0003777|GO:0005524|GO:0007018
Blo16g00131 960 Coils Coil 571 591 - -
Blo16g00131 960 Pfam Domain of unknown function (DUF3490) 778 940 IPR021881 -
Blo16g00131 960 PRINTS Kinesin heavy chain signature 301 322 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo16g00131 960 PRINTS Kinesin heavy chain signature 106 127 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo16g00131 960 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo16g00131 960 PRINTS Kinesin heavy chain signature 250 268 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo16g00131 960 Coils Coil 360 380 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00131 K11498 CENPE; centromeric protein E - csv:101215425 1518.44
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00833 Blo16g00131 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00131 Blo-Chr16:2970456 Blo16g00862 Blo-Chr16:36156137 0 dispersed
Blo16g00131 Blo-Chr16:2970456 Blo04g00833 Blo-Chr4:8863056 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g285 Blo04g00833 Blo16g00131 . . . Bpe13g00360 Bma06g00050 . Cmo13g01049 Cmo18g00040 . . . . . Cpe20g00132 . . . . . . . . . . . . . . . . . . . Lsi02g00207 Csa01g00689 Chy12g01421 Cme12g01857 . . Bda11g01773 . . Bpe15g00531 Bma03g00900 . . . . Cma13g01010 Cma18g00049 Car13g00845 Car18g00043 Cpe09g01132 . Bhi08g01257 . . . . . . Cla04g01075 Cam04g1119 Cec01g1632 Cco01g1678 Clacu04g1145 Cmu04g1126 Cre01g1427 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001397 1 1 3 3 2 2 3 2 2 1 2 2 3 2 2 3 2 2 3 2 2 2 2 3 4 2 1 10 2 2 73
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00131 Blo_Chr16 FPKM 4.680212 5.117897 3.365185 3.814535 13.626295 14.114905 15.209227 6.408393 7.189719 6.324899