Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo16g00147 | ATGGAGCCTGTTGACATAGTAGGGAAGTCGAAAGAAGACGCTTCGCTTCCGAAAGCAACAATGACCAAAATTATCAAGGAGATGCTCCCACCTGATGTGCGCGTTGCGAGGGATGCTCAGGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAGCCTTCTATCATCAGAGTCTAATGAAGTTTGTAACAAAGAAGAGAGAAAAACAATTGCTCCTGAGCATGTGCTCAAGGCTTTGGAGGTGCTTGGGTTTGGCGATTACATTGAGGAAGTTTTTGCAGCTTATGAACAACACAAGCTTGAAACTATGGTAACTTTTATTCGTTGTGAATCCTTGAAAAGTGGGAAGTGTAGCAGCAATGTAGCGAAAATGTCGGAGGAAGAAGCTCTAGCTGAGCAGCAGAGAATGTTTGCAGAGGCACGGGCAAGAATGAACGGCGGGGTGGCTCCTCTTAAGCAGCCGGATTCAAACCAAAGTTTAGAGAAC | 486 | 44.86 | MEPVDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFISLLSSESNEVCNKEERKTIAPEHVLKALEVLGFGDYIEEVFAAYEQHKLETMVTFIRCESLKSGKCSSNVAKMSEEEALAEQQRMFAEARARMNGGVAPLKQPDSNQSLEN | 162 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 3246930 | 3249127 | - | BLOR07395 | Blo16g00147 | 71338 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo16g00147 | 162 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 14 | 79 | IPR003958 | - | |
Blo16g00147 | 162 | PANTHER | PROTEIN DR1 HOMOLOG | 1 | 159 | - | - | |
Blo16g00147 | 162 | SUPERFAMILY | Histone-fold | 12 | 147 | IPR009072 | GO:0046982 | |
Blo16g00147 | 162 | Gene3D | Histone, subunit A | 5 | 147 | IPR009072 | GO:0046982 | |
Blo16g00147 | 162 | Coils | Coil | 123 | 143 | - | - | |
Blo16g00147 | 162 | PANTHER | PROTEIN DR1 HOMOLOG | 1 | 159 | IPR044255 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo16g00147 | Blo-Chr16:3246930 | Blo11g00227 | Blo-Chr11:1847022 | 1.57E-18 | dispersed | |
Blo16g00147 | Blo-Chr16:3246930 | Blo04g00812 | Blo-Chr4:8423345 | 4.01E-78 | wgd | |
Blo16g00147 | Blo-Chr16:3246930 | Blo06g01194 | Blo-Chr6:35462669 | 4.41E-80 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13372 | PF00808 | CBFD_NFYB_HMF | 2.20E-23 | CL0012 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo16g00147 | K21751 | - | jre:109017784 | 256.529 |