Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00147 ATGGAGCCTGTTGACATAGTAGGGAAGTCGAAAGAAGACGCTTCGCTTCCGAAAGCAACAATGACCAAAATTATCAAGGAGATGCTCCCACCTGATGTGCGCGTTGCGAGGGATGCTCAGGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAGCCTTCTATCATCAGAGTCTAATGAAGTTTGTAACAAAGAAGAGAGAAAAACAATTGCTCCTGAGCATGTGCTCAAGGCTTTGGAGGTGCTTGGGTTTGGCGATTACATTGAGGAAGTTTTTGCAGCTTATGAACAACACAAGCTTGAAACTATGGTAACTTTTATTCGTTGTGAATCCTTGAAAAGTGGGAAGTGTAGCAGCAATGTAGCGAAAATGTCGGAGGAAGAAGCTCTAGCTGAGCAGCAGAGAATGTTTGCAGAGGCACGGGCAAGAATGAACGGCGGGGTGGCTCCTCTTAAGCAGCCGGATTCAAACCAAAGTTTAGAGAAC 486 44.86 MEPVDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFISLLSSESNEVCNKEERKTIAPEHVLKALEVLGFGDYIEEVFAAYEQHKLETMVTFIRCESLKSGKCSSNVAKMSEEEALAEQQRMFAEARARMNGGVAPLKQPDSNQSLEN 162
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3246930 3249127 - BLOR07395 Blo16g00147 71338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00147 162 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Blo16g00147 162 PANTHER PROTEIN DR1 HOMOLOG 1 159 - -
Blo16g00147 162 SUPERFAMILY Histone-fold 12 147 IPR009072 GO:0046982
Blo16g00147 162 Gene3D Histone, subunit A 5 147 IPR009072 GO:0046982
Blo16g00147 162 Coils Coil 123 143 - -
Blo16g00147 162 PANTHER PROTEIN DR1 HOMOLOG 1 159 IPR044255 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00147 Blo-Chr16:3246930 Blo11g00227 Blo-Chr11:1847022 1.57E-18 dispersed
Blo16g00147 Blo-Chr16:3246930 Blo04g00812 Blo-Chr4:8423345 4.01E-78 wgd
Blo16g00147 Blo-Chr16:3246930 Blo06g01194 Blo-Chr6:35462669 4.41E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13372 PF00808 CBFD_NFYB_HMF 2.20E-23 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00147 K21751 - jre:109017784 256.529