Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00162 ATGGCAAGGCAGTCTGAAAAATTTTCAGCCGACTTTTTCATGGGAGGAGTTGCGGCAATAATATCAAAAAGTGCAGCAGCACCTATTGATAGGGTGAAGCTTCTATTGCAAAATCAAGGAGAAATGATAAAAAGAGGACAAATCAATAGACCGTATACGGGCATTCGAGATGGATTCAAAAGGGTTTTGAGAGAGGAGGGCTTCTTTTCCTTTTGGCGGGGTAATCAGGCCAACGTTATTCGATATTTCCCTACTCAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAACGAGTTTTTGGATGTTCGAAAGAGAAAGATGGGTACTTGAAATGGTTTGCTGGAAATGTGGCTTCTGGAAGTGCTGCGGGAGCAACAACTTCTCTGTTTCTATATCATCTCGACTATGCTCGGACCCGCTTAGCCACAGACACGCGAGGATGCACCATTAATAATCACCGCCAGTTTAAAGGCCTTCTCGATGTCTACACTAAAACATTGTCAAGCGATGGAATTGTCGGTTTGTATCGAGGTTTTAGCGTTTCAATCATGGGAATTACTTTGTACAGAGGCTTGTACTTTGGGATCTATGACACAATGAAACCTCTTGTTTTGGTCGGTCCCTTTGAGGAAAATTTCTTTGCCAGTTTCTTCTTGGGGTGGAGCATCACTACTTTTTCTGGAGTTTGTGCGTATCCTTTTGACACGCTCCGACGGAGAATGATGATGACTTCCGGACAAAGTTTCAAATATCGCAATGGAGTGCATGCATTTCGTGAGATCATTCGCCAAGAGGGTTCTACGGCACTTTTCCGAGGAGTCACTGCAAATATGCTTCTTGGTGTTGCCGGAGCTGGAGTTCTTGCTGGTTATGATCAGTTGAATTGCATCGTGTCAAGG 900 43.67 MARQSEKFSADFFMGGVAAIISKSAAAPIDRVKLLLQNQGEMIKRGQINRPYTGIRDGFKRVLREEGFFSFWRGNQANVIRYFPTQAFNFAFKGYFKRVFGCSKEKDGYLKWFAGNVASGSAAGATTSLFLYHLDYARTRLATDTRGCTINNHRQFKGLLDVYTKTLSSDGIVGLYRGFSVSIMGITLYRGLYFGIYDTMKPLVLVGPFEENFFASFFLGWSITTFSGVCAYPFDTLRRRMMMTSGQSFKYRNGVHAFREIIRQEGSTALFRGVTANMLLGVAGAGVLAGYDQLNCIVSR 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3689663 3691571 - BLOR07410 Blo16g00162 71353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00162 300 Pfam Mitochondrial carrier protein 211 293 IPR018108 -
Blo16g00162 300 Pfam Mitochondrial carrier protein 6 101 IPR018108 -
Blo16g00162 300 Pfam Mitochondrial carrier protein 112 204 IPR018108 -
Blo16g00162 300 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 300 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo16g00162 300 SUPERFAMILY Mitochondrial carrier 6 294 IPR023395 -
Blo16g00162 300 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085
Blo16g00162 300 PRINTS Mitochondrial carrier protein signature 176 194 IPR002067 GO:0055085
Blo16g00162 300 PRINTS Mitochondrial carrier protein signature 11 24 IPR002067 GO:0055085
Blo16g00162 300 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085
Blo16g00162 300 PRINTS Mitochondrial carrier protein signature 24 38 IPR002067 GO:0055085
Blo16g00162 300 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085
Blo16g00162 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 297 IPR018108 -
Blo16g00162 300 PRINTS Adenine nucleotide translocator signature 8 20 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo16g00162 300 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo16g00162 300 PRINTS Adenine nucleotide translocator signature 216 232 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo16g00162 300 PRINTS Adenine nucleotide translocator signature 111 124 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo16g00162 300 PRINTS Adenine nucleotide translocator signature 52 73 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo16g00162 300 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 1 300 - -
Blo16g00162 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 99 IPR018108 -
Blo16g00162 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 203 IPR018108 -
Blo16g00162 300 Gene3D Mitochondrial carrier domain 2 299 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00643 Blo-Chr7:21090604 Blo16g00162 Blo-Chr16:3689663 3.71E-128 dispersed
Blo13g00360 Blo-Chr13:21128221 Blo16g00162 Blo-Chr16:3689663 3.68E-126 dispersed
Blo16g00162 Blo-Chr16:3689663 Blo11g00309 Blo-Chr11:2489516 4.23E-31 dispersed
Blo16g00162 Blo-Chr16:3689663 Blo06g00605 Blo-Chr6:28816334 2.48E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00162 K05863 - zju:107419129 492.271