Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00171 ATGGAGGTTAGTTGGTTTGACGATGCAGAGAACACAAGTGGTACAATCGGTGCAAGGCTTTCGGCAAATGCAGCTATGGTGCGGGCCCTAGTTGGGGATGCACTTGGTCAAATGGTCGAGAATATTGCGGCCATGACAACCGGTTTGATCATCGCTTTTGTTACAAGTTGGCAGCTAGCTCTGATAGTTCTTGTCATGTTTCCTCTTATCGGACTCAACGGATACGTTCAGATGGAGTTTCTCAAAGGATTTAGCGTCGATGCTAAGATGATGTATGAAGAAGCTAGTCAGGTAGCTAATGATGCAGTGGGGAGTATAAGAACAGTGGCTTCATTTTGTGCAGAAGAGAAGGTGATGCAGCTCTACAAAAAGAAATGCGAAGGCCCTCTTAAATCAGGAATAAGACAAGGCTTGATCAGCGAGATCGGATTCGGCTTGAGAACTAGAGACCGCGAAGTCTCAGCCAAAGACCGCAAAAATTGCGTTACCATGTTATCCACACGTTGTGATGTTGCCCGTTCTGAAAGCTCAGGTGGTGAATCAGAGCTTGCCCGGAGGATAATTTATAAATGGGACAAAGCTTCCATTGATGTACGACATGCATACAGACAATTCATTGGATCTGTGGTCGAGTTGATAGATCGGGAGGTGCCATCTGAAGAGTTTAGAGAGGTGGCAATGACTATTTATCGCCTTTTTGGAGGGTCAAAAGATGAGACCAATCTCGATAGTCATTTTCATAACAAGAAGTCGGAATTGGAAAAATTACTCGGCAGTTCAGTGTCAGATTTAATCTTGCAGAAAGTTGTCTCTCATGCTCATAAACTTTTTGAGTTGCAGCCTAGTGACCCGGAAGCTGAAAACAATCTTGAGAGTCATGTGAATCATAATAGTGAAGATGTTGAGTTTGGGGCTGATCTTGTTTTTAAAGCACCATCACGGTTTCTGGTTGATGATGGAGAACTAATGAGTGAGACTATCACTACACCTTCATTTTTTGAAGGATGTTATGGTCAAAATAATTCCATAATCTATAAGGGGTCAAATGGAAGTGGAAACTTCAATTTGAGTTGGTTAAGAGATGCATGTGATGGAATAGTTAGGAAATGTGGTTCACAACTTTCCAGTGATGAATTGGCAATGGCCATTTGTCGGGTCCTTAATGCAGACAAAACTGGCGAGGAGATAGCTGCTGATCTATTGGATCTTGTTGGGGATAGCGAATTTGAAACTGTGCAAGACCTTATATCGCACCAAAAAGAACTCATTGATGCTTTTAATCATGGTCTACTAATGATGAGATCAGAGAAAGTGGATTCAACTTCTCAATCAAGAATGCCTAGTTATGGCACCCAGGTTACTGTTCAAACAGAGACAGAACGACAAATTGACAAACTTCGGCGCAAGGAGGAAAAGCGACATAGACGGGGAGGAGAATATGGAAATGAAAGTGATTTATCAGCCATAAATTTCTCTTCTCTAATTCATGCCAGTCAGAAGAAAAGTCCACTTGATGATCTGATTGGATCTGGTGATCGGTCCAATTCATTAGCAGTAACTGCACTTCCTCAAGGCACTCTCAGAAAGCACCATAAGGGTTATGAGGAAGTTATTATCCCTCCAACGGCAACAGCACAAATGAAGCCCGGAGAAAAGCTGATTGAGATAAAAGAGTTGGATGACTTTGCCCAAGCTGCCTTTCGTGGATACAAGTCCCTCAATCGCATTCAAAGCCGGATATTTCATACTGTTTATCATACCAATGAAAACATACTGGTTTGTGCACCGACAGGAGCTGGAAAAACTAACATAGCTATGATTTCCATTCTTCATGAGATTGCACAGCACTTCAAGGATGGCTACTTGCATAAAAATGAATTTAAGATTGTTTATGTTGCTCCTATGAAGGCATTAGCTGCAGAGGTCACATCAACGTTTAGCCATCGTTTATCTCCATTAAATGTGACTGTTAGAGAACTTACAGGAGATATGCAACTTTCTAAGAATGAACTTGAGGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGACGTGATTACCCGCAAAAGCAGTGATATGTCTCTGTCTATGTTAGTAAAGCTCCTAATTATTGATGAAGTGCATCTTCTGAATGATGACAGAGGGCCTGTAATAGAGGCATTGGTAGCTCGGACTCTTCGTCAGGTGGAATCGACACAAACAATGATACGCATCGTGGGCCTATCAGCGACATTGCCCAATTACTTAGAGGTTGCTCAATTTTTAAGAGTAAATCCTGAGACAGGACTCTTCTACTTTGATTCAAGCTATCGTCCTGTGCCTCTTGCGCAGCAGTATATTGGTATCAGTGAGCAGAACTTTGCAGCCCGTAATGAACTGTTAAACGAAATATGTTATAAGAAGGTTGTGGAGTCTTTAAGGCATGGTCATCAAGCTATGGTATTTGTACATTCGCGGAAAGACACAGCGAAAACAGCTGCGAAATTAGTTGAACTTGGTCGAAAATATGATGAGCTTGAGATCTTTAGCAATGACGCACATCCACAATTTGCTTTAATTAAGAAGGAAGTTGTCAAGTCCAGAAACAAAGATCTAGTAGAACTTTTTGAATTTGGAGTTGGTGTTCATCATGCTGGGATGTTACGAGCTGACAGAGGTCTAACTGAGCGCCTTTTTTCGGATGGACTTTTGAAGGTACTTGTTTGTACAGCAACTTTGGCATGGGGTGTAAATCTTCCTGCTCACACTGTCGTCATAAAGGGAACACAATTGTATGATCCCAAGGCTGGTGGTTGGCGAGATCTGGGAATGCTTGATGTTATGCAGATATTTGGACGCGCTGGGAGACCGCAGTTTGACAAAAGTGGAGAAGGCATCATAATTACTTCTCATGATAAACTAGCATATTATTTGCGACTGCTGACTAGTCAGCTCCCTATAGAGAGTCAGTTTATCAGCTCCTTAAAAGATAATTTAAACGCAGAGGTGGCATTGGGTACTGTGACCAATGTGAAGGAAGCTTGCGCATGGCTTGGCTATACATACCTCTTTATAAGAATGAGGTTGAATCCATTGGCATATGGTATTGGATGGGATGAGGTTGTTGCCGATCCCTCATTGAGTTCAAAGCAAAGAGTTCTTATTACAGATGCTGCTCGAGCACTTGACAAGGCAAAAATGATGCGGTTTGATGAGAAAAGTGGCAACTTTTATTGTACAGAGCTTGGCCGCATTGCCAGCCACTTCTATATTCAATACACCAGTGTGGAAACGTACAATGAAATGTTGAGACACCACATGAATGAAAGTGAGGTAATTAACATGGTTGCTCATTCTTCTGAATTTGAAAATATTGTTGTTCGGGAGGAGGAACAAAATGAGCTAGAAACATTAGCACGCACCTCATGTCCTTTAGAAGTAAAAGGTGGCCCGTCTAATAAACATGGAAAAATTTCAATTCTTATCCAGTTGTACATATCTCGAGGTTCTATTGATTCATTCTCTTTAGTTTCTGATGCTGCATATATAAGTGCTAGCTTAGCCCGTATTATGCGAGCTTTATTTGAAATCTGTCTCCGGAGAGGCTGGTGTGTGATGACTTTGTTAATGTTGGAATATTGCAAAGCTGTTGATCGTCAAATTTGGCCCTACCGTCATCCTCTTAGACAATTTGACAAGGATCTGTCAGGAGAAATACTACGGAAGCTTGAAGAACGTGAAGCTGACTTAGATCGTCTCCTGGAGATGCAGGAAAAAGACATAGGCGCACTAATTCGCTATGCGCCTGGAGGAAGAGTGGTTAAGCAATATTTAGGACATTTTCCTTTCATCCAAATATCTGCAACTGTTAGTCCAATCACGAGAACAGTTCTGAAGGTGGATGTTCACATAACACCTGACTTCATATGGAAAGACCGTTTTCATGGTGCAGCACAACGATGGTGGATTCTTGTTGAGGATTCTGAGAATGATCACATCTATCACTCGGAGCTTTTCACTTTGACAAAAAGAATGGCTAGAGGAGAACCTCAAAAGCTTACCTTCACAGTGCCAATATTTGAGCCTCATCCACCACAATATTACATTCATGCTGTTTCTGATTCCTGGCTGCACGCTGAGGCATTCTACACCATATCTTTCCAGAATCTAGCATTGCCGGAGGCAGGATCATCCCACACTGAACTTTTAGATTTAAAACCTCTTCCTCTGACTGCCCTAGGCAACAAAGAATACATGTCTTTGTACAGGTTTTCACATTTTAATCCTATACAAACACAGATTTTTCATATATTGTTTCACATGGACAATAATGTCCTTCTAGGCGCTCCAACAGGTAGTGGGAAAACTATATCTGCAGAGCTTGCTATGCTTCGCCTCTTTAATACGCAACCTGATATGAAGGTCATTTATATAGCACCTCTAAAAGCCATTGTACGGGAAAGAATGAATGACTGGAGGGATCATCTTGTCCCCCAGCTGGGGAAAAAAATGGTTGAAATGACTGGAGATTATACTCCAGATTTGACGGCTCTTTTGTCAGCTGATATCATAATATCTACTCCAGAAAAGTGGGATGGTATCAGTCGAAATTGGCATAGTCGAAGTTATGTTAAAAAAGTTGGACTAATGATTTTGGACGAGATCCATTTACTTGGAGCAGATAGAGGACCCATACTTGAGGTTATTGTTTCAAGGATGAGATACATATCATCTCAAACTGAGCGATCAGTGCGGTTTGTAGGACTTTCTACAGCTTTGGCAAACGCAGGAGATTTGGCTGATTGGCTGGGTGTTGAGGAAATTGGGCTCTTCAATTTTAAACCAAGTAACTCAAATTTCACAAACTTCCTTTTTACAACAGGTTATCCTGGAAAGTTCTACTGTCCGAGGATGAATAGTATGAATAAACCAGCCTATGCTGCAATTTGCACCCACTCGCCCACAAAACCAGTCCTCATATTTGTGTCATCTCGCCGGCAGACAAGGCTTACTGCATTAGATCTCATTCAGTTTGCAGCATCAGATGAACATCCAAGGCAGTTTCTCAATTTTTCTGAAGAAGAACTTCATATGGTACTTTGCCAAGTCACTGATCAAAACCTCAGGCACACCTTGCAATTTGGTATTGGAATTCACCATGCAGGTTTGAATGACAAAGATAGATCAATGGTGGAAGAACTATTTTCAAACAACAAGATCCAGGTGTTAGTTTGTACTAGCACATTAGCATGGGGCGTGAATCTTCCAGCTCATCTAGTTATTATCAAGGGAACAGAGTACTATGATGGAAAGTTAAAGAGGTATGTTGATTTTCCAATTACGGATATTTTACAAATGATGGGTCGTGCAGGACGTCCTCAGTATGATCAACATGGAAAAGCCGTCATTCTTGTTCATGAACCAAAAAAGAGCTTTTATAAAAAGTTCCTGTATGAACCGTTCCCAGTTGAGAGCAGCCTAAAAGAGCAATTGCATAATCACATCAATGCAGAGATAGTTTGTGGAACAATTTGCCACAAGGAGGATGCAATGCGTTATCTAACTTGGACTTACTTTTTTCGCAGATTGATGCAAAATCCTGCTTACTATGGATTGGATTGTGCTGAACCTGCAATTCTTAATTCTTACTTGTCTAGGCTAGTACAGAACACTTTGGAAGATCTGGAGGATAGTGAGTGCATCAAGATGAATGAAGACAGCGTGGAGCCAATGATGCTTGGTTCAATAGCATCTCAATATTACCTTAGCTATGTTACTGTGTCAATGTTTGGCTCGAATATAGATTCAAATACATCACTTGAAGTATTTTTGCATATCCTGTCCGCTGCATCTGAATTCGATGAACTTCCTGTCCGTCATAATGAGGAAAATTACAATGCAGCTTTGTCTGCGAAAGTTCGATATAAGGTGGATAAGGATCGACTGGATGATCCTCATGTCAAAGCAAATTTGCTATTTCAGGCACATTTTTCTCAGTTGGAATTACCAATCAGTGACTACATCACAGACTTGAAGTCTGTGTTGGATCAAAGTATACGTATCATCCAGGCCATGATAGACATTTGTGCTAATAGTGGATGGCTTGCAAGCGCAATTACTTGTATGCATCTTCTGCAAATGATCATGCAGGGTGTATGGTCTGATATAGATTCTTCCTTGTGGATGTTGCCATGCATGAATGAAGATCTTGCAAGTCTTCTGGGCAAAAAGGAAATTTATTCCGTACAGCAACTATTGGATCTTCCAAAGACAACTTTACAAAATCTAGTTGCAAATGTTCCTGCTTCGAAATTACTAAAGGATTTACAGAATTTTCCTTGTATTAAAATGATGGTAAAACTTCAAAGCAAGGATGCTGGTAACGACAAATCTCTGAGTATCAGACTGGAGAAGACTAATTCAAGGCGAAATAAGTCGAGGGCATTCACGCCTCGATTTCCCAAGTTGACCCTTGGTCAGGAGTCCCTCATGGAGAGTCCTTTTTGGGAGCTACCCATCCACCTTCACAAGCCCTTGGTTTGCCCATCAAAAGAATTCATTGATCCTTCCAGAGCCATCAATCAACCCTACAATAGGCTAGCGTATGCAAACGGAAAACAAGCCTTAGATGGTCGTCCTTCTTACGCTGAGATCTGTCGAAGGCGGGAGGAAGATCACTTTAGCGGAGTCTTAAAGAATAGGCTGTTAATCAACCATGGGATGGAAGAGACCAATTGCTATGAGGACCGTGCGCAGATAAATTTCAATTATATGGAGTCTTGGAAGGACACATTAGAAAATGCAGCTGTTTGCACTAAAGAGGAGGAAGAAGTCTTACCTGAGACTTACAAGGAAGAATGTAAAGGAAGGTGGATTGCTATTCATGGTATCCCTTTCAATCTTTGGTGCAGTGAAACATGGAAACAATTGGGCGAATATTGTGGAGGGCTCTTGGAGGTGGATAAACACAAGATATCTTTCAGAAGGATTTCAGATGCAAGAATTAAGGTGAAAGATGAAGCATGGTGGTTGATTCTTGGTAACACCTCTAGTTCTGAACTATATGCTTTAAAAAGAGTATCATTCTCTGACCGGTTGGTTACACACATGGAGTTACCTCCTCATTGTTCGGATCTTCAGGTCTAG 7128 41.33 MEVSWFDDAENTSGTIGARLSANAAMVRALVGDALGQMVENIAAMTTGLIIAFVTSWQLALIVLVMFPLIGLNGYVQMEFLKGFSVDAKMMYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEGPLKSGIRQGLISEIGFGLRTRDREVSAKDRKNCVTMLSTRCDVARSESSGGESELARRIIYKWDKASIDVRHAYRQFIGSVVELIDREVPSEEFREVAMTIYRLFGGSKDETNLDSHFHNKKSELEKLLGSSVSDLILQKVVSHAHKLFELQPSDPEAENNLESHVNHNSEDVEFGADLVFKAPSRFLVDDGELMSETITTPSFFEGCYGQNNSIIYKGSNGSGNFNLSWLRDACDGIVRKCGSQLSSDELAMAICRVLNADKTGEEIAADLLDLVGDSEFETVQDLISHQKELIDAFNHGLLMMRSEKVDSTSQSRMPSYGTQVTVQTETERQIDKLRRKEEKRHRRGGEYGNESDLSAINFSSLIHASQKKSPLDDLIGSGDRSNSLAVTALPQGTLRKHHKGYEEVIIPPTATAQMKPGEKLIEIKELDDFAQAAFRGYKSLNRIQSRIFHTVYHTNENILVCAPTGAGKTNIAMISILHEIAQHFKDGYLHKNEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPETGLFYFDSSYRPVPLAQQYIGISEQNFAARNELLNEICYKKVVESLRHGHQAMVFVHSRKDTAKTAAKLVELGRKYDELEIFSNDAHPQFALIKKEVVKSRNKDLVELFEFGVGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDEVVADPSLSSKQRVLITDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYTSVETYNEMLRHHMNESEVINMVAHSSEFENIVVREEEQNELETLARTSCPLEVKGGPSNKHGKISILIQLYISRGSIDSFSLVSDAAYISASLARIMRALFEICLRRGWCVMTLLMLEYCKAVDRQIWPYRHPLRQFDKDLSGEILRKLEEREADLDRLLEMQEKDIGALIRYAPGGRVVKQYLGHFPFIQISATVSPITRTVLKVDVHITPDFIWKDRFHGAAQRWWILVEDSENDHIYHSELFTLTKRMARGEPQKLTFTVPIFEPHPPQYYIHAVSDSWLHAEAFYTISFQNLALPEAGSSHTELLDLKPLPLTALGNKEYMSLYRFSHFNPIQTQIFHILFHMDNNVLLGAPTGSGKTISAELAMLRLFNTQPDMKVIYIAPLKAIVRERMNDWRDHLVPQLGKKMVEMTGDYTPDLTALLSADIIISTPEKWDGISRNWHSRSYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVEEIGLFNFKPSNSNFTNFLFTTGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNFSEEELHMVLCQVTDQNLRHTLQFGIGIHHAGLNDKDRSMVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKLKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEQLHNHINAEIVCGTICHKEDAMRYLTWTYFFRRLMQNPAYYGLDCAEPAILNSYLSRLVQNTLEDLEDSECIKMNEDSVEPMMLGSIASQYYLSYVTVSMFGSNIDSNTSLEVFLHILSAASEFDELPVRHNEENYNAALSAKVRYKVDKDRLDDPHVKANLLFQAHFSQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLASAITCMHLLQMIMQGVWSDIDSSLWMLPCMNEDLASLLGKKEIYSVQQLLDLPKTTLQNLVANVPASKLLKDLQNFPCIKMMVKLQSKDAGNDKSLSIRLEKTNSRRNKSRAFTPRFPKLTLGQESLMESPFWELPIHLHKPLVCPSKEFIDPSRAINQPYNRLAYANGKQALDGRPSYAEICRRREEDHFSGVLKNRLLINHGMEETNCYEDRAQINFNYMESWKDTLENAAVCTKEEEEVLPETYKEECKGRWIAIHGIPFNLWCSETWKQLGEYCGGLLEVDKHKISFRRISDARIKVKDEAWWLILGNTSSSELYALKRVSFSDRLVTHMELPPHCSDLQV 2375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3835216 3867947 + BLOR07419 Blo16g00171 71362

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00171 2375 Gene3D C2 domain 2312 2371 IPR035892 -
Blo16g00171 2375 CDD DEXHc_ASCC3_2 1420 1608 - -
Blo16g00171 2375 Gene3D - 1618 1817 IPR027417 -
Blo16g00171 2375 Gene3D C2 domain 1275 1384 IPR035892 -
Blo16g00171 2375 Pfam Sec63 Brl domain 1904 2149 IPR004179 -
Blo16g00171 2375 Gene3D - 982 1072 IPR036388 -
Blo16g00171 2375 PIRSF BRR2 139 2371 - -
Blo16g00171 2375 Pfam ABC transporter transmembrane region 1 145 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo16g00171 2375 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 582 764 IPR014001 -
Blo16g00171 2375 SUPERFAMILY Winged helix DNA-binding domain 1816 1916 IPR036390 -
Blo16g00171 2375 PANTHER SEC63 DOMAIN-CONTAINING 557 602 - -
Blo16g00171 2375 PANTHER SEC63 DOMAIN-CONTAINING 603 2150 - -
Blo16g00171 2375 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3 557 602 - -
Blo16g00171 2375 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3 603 2150 - -
Blo16g00171 2375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 767 980 IPR027417 -
Blo16g00171 2375 Coils Coil 1234 1254 - -
Blo16g00171 2375 Gene3D ABC transporter type 1, transmembrane domain 2 146 IPR036640 GO:0005524|GO:0016021
Blo16g00171 2375 Pfam DEAD/DEAH box helicase 1423 1587 IPR011545 GO:0003676|GO:0005524
Blo16g00171 2375 SUPERFAMILY Winged helix DNA-binding domain 980 1085 IPR036390 -
Blo16g00171 2375 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1636 1845 IPR001650 -
Blo16g00171 2375 SMART Sec63_2 1904 2189 IPR004179 -
Blo16g00171 2375 SMART Sec63_2 1073 1381 IPR004179 -
Blo16g00171 2375 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 799 997 IPR001650 -
Blo16g00171 2375 Gene3D - 1818 1911 IPR036388 -
Blo16g00171 2375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 757 IPR027417 -
Blo16g00171 2375 Pfam Domain of unknown function (DUF4283) 2284 2331 IPR025558 -
Blo16g00171 2375 Gene3D - 1074 1216 - -
Blo16g00171 2375 CDD ABC_6TM_Pgp_ABCB1_D2_like 1 146 - -
Blo16g00171 2375 Gene3D - 1385 1612 IPR027417 -
Blo16g00171 2375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1619 1816 IPR027417 -
Blo16g00171 2375 SMART AAA_5 1435 1606 IPR003593 -
Blo16g00171 2375 SMART AAA_5 587 768 IPR003593 -
Blo16g00171 2375 SUPERFAMILY ABC transporter transmembrane region 2 145 IPR036640 GO:0005524|GO:0016021
Blo16g00171 2375 MobiDBLite consensus disorder prediction 439 484 - -
Blo16g00171 2375 SUPERFAMILY Sec63 N-terminal domain-like 1937 2092 - -
Blo16g00171 2375 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 146 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo16g00171 2375 MobiDBLite consensus disorder prediction 439 459 - -
Blo16g00171 2375 MobiDBLite consensus disorder prediction 460 481 - -
Blo16g00171 2375 Pfam DEAD/DEAH box helicase 575 748 IPR011545 GO:0003676|GO:0005524
Blo16g00171 2375 Pfam Helicase conserved C-terminal domain 805 950 IPR001650 -
Blo16g00171 2375 Pfam Helicase conserved C-terminal domain 1693 1786 IPR001650 -
Blo16g00171 2375 CDD SF2_C_Ski2 1622 1800 - -
Blo16g00171 2375 Gene3D - 773 975 IPR027417 -
Blo16g00171 2375 Gene3D - 561 772 IPR027417 -
Blo16g00171 2375 SMART helicmild6 1696 1788 IPR001650 -
Blo16g00171 2375 SMART helicmild6 860 952 IPR001650 -
Blo16g00171 2375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1307 1598 IPR027417 -
Blo16g00171 2375 SUPERFAMILY Sec63 N-terminal domain-like 1101 1276 - -
Blo16g00171 2375 CDD SF2_C_Ski2 772 963 - -
Blo16g00171 2375 Pfam Sec63 Brl domain 1073 1380 IPR004179 -
Blo16g00171 2375 Gene3D - 1219 1272 - -
Blo16g00171 2375 Gene3D - 1912 2048 - -
Blo16g00171 2375 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1430 1605 IPR014001 -
Blo16g00171 2375 CDD DEXHc_ASCC3_1 572 768 - -
Blo16g00171 2375 SMART ultradead3 1417 1617 IPR014001 -
Blo16g00171 2375 SMART ultradead3 569 780 IPR014001 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00171 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4] - jre:108982901 3286.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00826 Blo-Chr10:26096718 Blo16g00171 Blo-Chr16:3835216 4.89E-89 dispersed
Blo16g00171 Blo-Chr16:3835216 Blo11g00413 Blo-Chr11:3578537 1.26E-16 dispersed
Blo16g00171 Blo-Chr16:3835216 Blo07g01025 Blo-Chr7:30056083 1.58E-17 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g647 . Blo16g00171 . . . Bpe13g00309 Bma06g00154 . Cmo13g01125 . . . . . . Cpe20g00069 . . . . . . . . . . . . . . . Cone2ag0807 . . . Lsi02g00115 Csa01g00593 Chy12g01505 Cme12g01949 . . Bda11g01720 . . . . . . . . Cma13g01078 . Car13g00915 . . . Bhi08g01095 . . . . . . Cla04g01159 Cam04g1218 Cec01g1729 Cco01g1775 Clacu04g1245 Cmu04g1224 Cre01g1520 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009577 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00171 Blo_Chr16 FPKM 2.518182 3.113535 18.657761 19.829172 69.43148 63.142963 66.577278 35.676937 39.28965 41.571381