Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00180 ATGCAAGGAGCACCTCGTCCCCCACCTCCTCCATTTCGAGTAGGAGTGCCACCTCCGCCACCTCCTCCAATCCCAGGAGCACCTTCTCCACCACCTCCTCCAATGCGAGTAGCACCACCCCCTCCACCACCACCAATGCAAGGAGCACCTCCTCCTCCTCCTCCTCCTTTTCATGGATCAACACCTCCACCTTCAGGTGGCCGTCCCCCTCCCCCTCCTCCACCAGGGGCTCGTGTTCCGGGCCCACCTAATCCTCCTAAACTTCCAGGTGGTGGGCCTCCTCCACCTCCACCTTTAGGTGCCAAAGGAGCTAATGCTTCTCCTGATGCAAGAGGTCTTGCTGTAGGGAGAGGTCGTGGGCTGTCGCGTCCTTCAAGCATGAATGCCGTAGGACCTCGACGATCTTCTTTGAAGCCTCTGCACTGGAGCAAAGTGACAAGAGCCTTGCAAGGGAGCTTGTGGGATGAAATCCAAAGATATGGAGAGCCTCAAATTGCACCAGAGTTTGATGTATCTGAGTTAGAGACCCTTTTCTCTGCAAATGTCCCAAAACCTGCTGATGGTGGAGGCAAATCAGGAGGCCGACGAAAGTCAGTTGGATCCAAGACTGACAAAGTGCATTTGATTGACCTAAGAAGAGCGAATAACACCGAGATTATGCTCACCAAAGTTAAGATGCCTCTTTCTGATATGATGGCTGCAGTGCTGGCAATGGATGAGTCAGTCTTAGATGTTGACCAAGTGGAAAATCTCATTAAGTTTTGTCCAACGAAGGAGGAGATGGAACTTCTCAAGGGATACACGGGTGACAAAGACAGTCTTGGAAAGTGTGAACAGTATTTTATGGAGCAGATGAAAGTACCTCGGGTGGAGTCAAAATTAAGAGTATTTTCTTTCAAAATTCAATTTCGCTCTCAGATTTCAGAATTCAAAAAGAGTTTAAACACCATAAACTCTGCGTGTGAAGAGGTCAGGAATTCTGTTAAACTAAAGGAGATTATGAAGAAAATCCTTTATCTGGGAAATACATTAAACCAAGGAACTGCAAGGGGTTCTGCAATTGGCTTCAAGTTGGACAGTCTTTTGAAGCTCACTGACACCCGTGCTTCTAATAGTAAAATGACACTTATGCATTACCTTTGCAAGGTCCTGGCTTCTCGGTCACCAACACTGCTTGATTTCCATCTAGACGTGGGTAGTCTTGAAGCTGCATCTAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCAATAATTAAGGGATTAGAGAAGGTCAAACAGGAGCTAGTTGCCTCCGAAAGCGATGGTCCAGTCTCGGATGTTTTTCGTAAGACATTGAAAGACTTTGTGGACATCACGGAGACTGAGGTGGCATCTGTGACAAATTTATACTCTGTGGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCTGCCCGTTGCCCATTTGAGCAAGTTGTAGCAACTCTCTTAAATTTTATAAGAATGTTTCGTAAAGCCCACGAAGAGAACTACAAACAGGCCGAATTAGAAAAGAAGAAAGCGGAGAAGGAAGCGGAAATGGAGAAGGCCAAGGGCATTAACCTAACAAAAAAGAGTGGGAAATAG 1623 46.64 MQGAPRPPPPPFRVGVPPPPPPPIPGAPSPPPPPMRVAPPPPPPPMQGAPPPPPPPFHGSTPPPSGGRPPPPPPPGARVPGPPNPPKLPGGGPPPPPPLGAKGANASPDARGLAVGRGRGLSRPSSMNAVGPRRSSLKPLHWSKVTRALQGSLWDEIQRYGEPQIAPEFDVSELETLFSANVPKPADGGGKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDSLGKCEQYFMEQMKVPRVESKLRVFSFKIQFRSQISEFKKSLNTINSACEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAIGFKLDSLLKLTDTRASNSKMTLMHYLCKVLASRSPTLLDFHLDVGSLEAASKIQLKSLAEEMQAIIKGLEKVKQELVASESDGPVSDVFRKTLKDFVDITETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVVATLLNFIRMFRKAHEENYKQAELEKKKAEKEAEMEKAKGINLTKKSGK 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4013756 4020794 + BLOR07428 Blo16g00180 71371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00180 540 MobiDBLite consensus disorder prediction 517 540 - -
Blo16g00180 540 Coils Coil 409 433 - -
Blo16g00180 540 Coils Coil 503 532 - -
Blo16g00180 540 MobiDBLite consensus disorder prediction 1 102 - -
Blo16g00180 540 Pfam Formin Homology 2 Domain 134 502 IPR015425 -
Blo16g00180 540 Gene3D Formin, FH2 domain 127 514 IPR042201 -
Blo16g00180 540 SUPERFAMILY Formin homology 2 domain (FH2 domain) 204 530 - -
Blo16g00180 540 MobiDBLite consensus disorder prediction 180 202 - -
Blo16g00180 540 PANTHER FORMIN-J 18 530 - -
Blo16g00180 540 SMART it6_source 126 538 IPR015425 -
Blo16g00180 540 MobiDBLite consensus disorder prediction 517 534 - -
Blo16g00180 540 MobiDBLite consensus disorder prediction 1 135 - -
Blo16g00180 540 ProSiteProfiles Formin homology-2 (FH2) domain profile. 127 528 IPR015425 -
Blo16g00180 540 PANTHER FORMIN-LIKE PROTEIN 15A-RELATED 18 530 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00779 Blo16g00180 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g01054 Blo-Chr12:28328199 Blo16g00180 Blo-Chr16:4013756 7.40E-168 dispersed
Blo16g00180 Blo-Chr16:4013756 Blo04g00781 Blo-Chr4:7742880 4.34E-180 dispersed
Blo16g00180 Blo-Chr16:4013756 Blo04g00779 Blo-Chr4:7722084 1.40E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00180 - - cpep:111780176 741.495