Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00188 ATGGAGGTGTCCGGACAGTGGTTGGAGAAGGCGTTGCTGAATCTCTGTCAAAATATGGAAACGGGGATGGGTTTGGATAAGGATATGATTTCGGGCTTGGTTTCGTATTGCGAGTTGGCTCAGCCTCAGGACGCTAAAGAATACCTTGATAATATCATCGGCCAAGAAGTCGGAAAAAGTGTGATTGATGAATATTTACAGCGGAGAGGTTTCACTTATCCCAGCAGCTCTATCCCAGATTTTCCAAGTTCAAAACTACATGCCTATGTGAAGCCGCCTTCGGACGAAGGTTCCATCAGTGGAAATAAGAAACAATTTAAAACACCAAAAATCTCAACAGCCTCCGTTAATGAGAAACAGGTTTCCACAGATACCAGTAACTCACAAAAAGGAAATCAAGGAAATTCTAGGAAGAAGAAAGGTGGGAAAGTTGTTTCACTTGCTGAGGCTACCAAAGGATCAATTGTATTCCAGCAAGGAAAGCCTTGTTCATGTCAAGCTCGTCGACACAGATTGGTGAGCAACTGCCTATCTTGTGGAAAAATAGTCTGTGAACAAGAGGGAGAAGGGCCTTGCCTTTTTTGCGGTGCTCTTGTGCTAAAGGAAGGAAGTGCCTATGCTGGTCTTGATGAAGGATTGGCCCCATTGTCCGATGCAGAAGTAGTGGCTGAAGCATATGCAAAACGGCTTGTTGAATATGACAGAAATTCTGCTGCAAGAACGTCAGTTATCGATGATCAAAGTGATTATTACGAGATCGAGGGGAATAGCTGGTTGTCTCTAGAGGAAAAGGAACTTTTAAGAAAGAAACGAGAAGAGATTGAAGAGGCTGAGCAAGCAAAACGGAGTAAAGTAGTTATAACATTTGACTTGGTCGGCCGCAAGGTTATTATAAATGAAGATGAAGCTGCAGAATCAGAACCAATGAACAGAATTCTCCGCCCTCGAGATGAAAGGGAATCTAACCGAATCAAAGCCAACCCGGGTCTTCTGATACAACCTGTGTTTATGGACCCGAGTCCAAGGGAGAGATCTGTGAGAAGAAGCAAAGATGCAAACAAGACCCTAAGCAATGGCCTGTGCTTGGAGGTAACTGGAAGGATTCAACAAGAGATCAGTGAATTGAGTTTATCATCAATGGCGACAAAAGGAAACATGGGCGACAATCGAAGTAGGAGTGTGATGCCGATTGTCATCGTTGTTGGTTTATGTGGTTTCTTCTATCTATTTGGTGCTTGGCAACGAAGTGGCTTTGGAAAGGGAGATAGCATTGCCATGGAGGTCACTAAACAATCGGACTGCAGTATCCTCTCCAATCTGAATTACGAGACTCATCATGGTGGTGATATTGGAACAGACGATGATCCCCAAGAAAAGTTAAAGTCGTTCAACCCGTGTAATGACAATTACATCGATTATACGCCTTGCCATGACCAAATGCGGGCAATGACTTTTCCACGAGAAAATATGAACTATCGGGAACGACACTGTCCTCCAGAAGAAGAGAAACTGCAGTGCCTGATCCCCGCTCCCAAGGGCTATGTGACCCCTTTTTCTTGGCCTAAGAGTCGTGATTACGTACCCTATGCAAATGCACCGTATAAGAGCTTGACTGTCGAGAAAGCCGTTCAGAATTGGATACAATACGAAGGCAATGTGTTCCGCTTTCCGGGCGGAGGTACTCAATTTCCTCATGGTGCCGATGCATATATTGAGCAACTTGCGTCGGTGATCCCTCTAGACAACGGAATGGTTCGAACTGCACTGGATACTGGATGCGGGGTTGCAAGTTGGGGTGCATATCTTTTTAAGAAGAATGTCATAGCCATGTCATTTGCTCCTCGAGATTCTCACGAAGCCCAAGTTCAATTTGCTTTAGAAAGAGGCGTACCAGCAGTTATTGGAGTTCTTGGAACGATTAAGCTACCTTATCCTACTGCATCATTCGACATGGCTCATTGCTCCCGTTGTTTGATACCTTGGGGTGCAAATGATGGAATGTATATGATGGAGGTTGATCGAGTTCTTCGACCTGGTGGGTATTGGGTGCTTTCGGGTCCTCCGATCAACTGGAGGAATAATTATCAAGCGTGGCAACGGCCAAAAGAGGAACTTCAGGAGGAACAGAGGAAGATCGAAGAGATTGCCAGGCAACTTTGCTGGGAAAAGAAATCTGAGAAGGGAGAGATAGCAATCTGGAAGAAGAGGAAGAACTACGACAGTTGTCGGGATCTGGAACATAAATCGACAATGTGTGAAATGGAATCTTCTCGTGACATCTGGTACAACAAAATGGAGGCATGTATTACTCCCTATCCTGAAACAGCAGCAGCTGACGAAGCTGCCGGTGGGACATGGAAGCCGTTTCCGGAGAGGCTTGTTTCTGTGCCGTATAGAATATCAAGCAGATCGATTCCTGGAACATCTGTCGAGGATTTTCATGAGGATAATAAGTTATGGAAGAAACATGTAAATGCGTACAGAAGAGTCAACAAGATCATCGACTCAGGTCGATACCGTAATATAATGGATATGAATGCTGGGTTGGGAAGTTTTGCTGCTGCTCTAGAGTCTCCGAAATTATGGGTCATGAATGTCATGCCCACCATAGTCGAGAAAGATACGCTCGGGGCTATTTTTGAACGCGGATTGATCGGCATATATCACGATTGGTACTCTGTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCATCTTTTCGCTTATGTTCTCCCCATTTAATCACAGGTGTGAAGCCTTCTCCACATATCCTAGAACATATGATCTTATCCACGCAAATGGTGTTTTCAGCCTGTATAAGGATAAATGTAAAGCGGAAGACATTTTACTGGAGATGGATCGAATACTCAGGCCAGAAGGAGCAGTGATTTTCCGAGACGAACTTGACGTGTTGATCAAGGTGAAGCGAATAGTCGGCGGAATGAGATGGAACACGAAATTGGTCGATCACGAGGACGGTCCGCTTACTTCCGAGAAGATTTTATTCGCTGTGAAACAATATTGGGTTGCTGGCCTTTCAATCCTGATGTCCAACGATCCTAGATTACAGCACTTTTGCCCATCAATGGAGAAACACCACAAATCCAATCATCTCAGCTCCTCCTTTTCTTATCTGGTGGCATCACCAGAAGAAAATTTCGTTCTTAAACTTTCCAAAAGCGTTCCTCACCCGGCCCCTCCAGCTACAACCCAGAAGCTAGCCTGTTCAAGAAGCTTGTCAAGAACAGCCAAAGAAGATGAAATCAGCGTTTTCGATGCGGAAGGATACTACAACATGAAACTGGAAGATGAAAGACCAGAAGAAATTCTAGGAACAAATGGAAGAAGGGTTTTGAAAAGCGTGGATCAGAAAACCTGGAGCAGACATGGAACTCCGAGTGTTTGTTCTGAATCGAGTAGGCATAGCCAAACAGCTTTGGTCCCGAATTTAATGAGAAACCCTTCTCAGAAAGATCAAAGTAAAGGAAAGGGAAGAAGTTTTTTAGCTTATCTCAGCTGCAGTGGGTCTTGTGGTGATGAAAAATCCATTTGTGTACAGAAAAACTCGGAGCAAAGAGGTCCCGCCATTGTTGATGGAAAAAAGAAGCTTCATACCAGTACAACAATGGCGAAAAGCAGGCAGAACTCTAAAGGGTTGATGCGAGATGAACATTATTTTGCTCCAAAATCACACGAGAGGGATGCGAAAATGGCGGAAGAAAAAGATCAAGACCCGCGAAAATCACTGGACGTGTTTGGCTCTCAGAAAATGAAAGAGGAAGAAGATACAGTCGCAATGAATCTAGAGAGAAAACTCTCAGTTTTTACATGGGACGCCATCCCTAAAGCTCCGACTGGTCAAAAGAAGGTTAAAAATGACAAAGAAGATGAAAATAGAAATAGCGACTGCAGTTCAGATCTGTTTGAGATCGAGAATCTTTCTGGAAGTGGGCAGCCATTATTTACCAGTCAAACCTCAGATGGGTTACCGAGCGAAACTGAAACAAGCATAGAACTCACTACTGCTTCAGAGTTTGAAGAGAAGCAAACGGCCGAGAAAGGAGCTGAACCGCCATTAATGGCGGAAAAAGGAGAAGCAGAAGAGCCATAA 4110 44.33 MEVSGQWLEKALLNLCQNMETGMGLDKDMISGLVSYCELAQPQDAKEYLDNIIGQEVGKSVIDEYLQRRGFTYPSSSIPDFPSSKLHAYVKPPSDEGSISGNKKQFKTPKISTASVNEKQVSTDTSNSQKGNQGNSRKKKGGKVVSLAEATKGSIVFQQGKPCSCQARRHRLVSNCLSCGKIVCEQEGEGPCLFCGALVLKEGSAYAGLDEGLAPLSDAEVVAEAYAKRLVEYDRNSAARTSVIDDQSDYYEIEGNSWLSLEEKELLRKKREEIEEAEQAKRSKVVITFDLVGRKVIINEDEAAESEPMNRILRPRDERESNRIKANPGLLIQPVFMDPSPRERSVRRSKDANKTLSNGLCLEVTGRIQQEISELSLSSMATKGNMGDNRSRSVMPIVIVVGLCGFFYLFGAWQRSGFGKGDSIAMEVTKQSDCSILSNLNYETHHGGDIGTDDDPQEKLKSFNPCNDNYIDYTPCHDQMRAMTFPRENMNYRERHCPPEEEKLQCLIPAPKGYVTPFSWPKSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPHGADAYIEQLASVIPLDNGMVRTALDTGCGVASWGAYLFKKNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPTASFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPINWRNNYQAWQRPKEELQEEQRKIEEIARQLCWEKKSEKGEIAIWKKRKNYDSCRDLEHKSTMCEMESSRDIWYNKMEACITPYPETAAADEAAGGTWKPFPERLVSVPYRISSRSIPGTSVEDFHEDNKLWKKHVNAYRRVNKIIDSGRYRNIMDMNAGLGSFAAALESPKLWVMNVMPTIVEKDTLGAIFERGLIGIYHDWYSVSLSLSFSFSLIFSLMFSPFNHRCEAFSTYPRTYDLIHANGVFSLYKDKCKAEDILLEMDRILRPEGAVIFRDELDVLIKVKRIVGGMRWNTKLVDHEDGPLTSEKILFAVKQYWVAGLSILMSNDPRLQHFCPSMEKHHKSNHLSSSFSYLVASPEENFVLKLSKSVPHPAPPATTQKLACSRSLSRTAKEDEISVFDAEGYYNMKLEDERPEEILGTNGRRVLKSVDQKTWSRHGTPSVCSESSRHSQTALVPNLMRNPSQKDQSKGKGRSFLAYLSCSGSCGDEKSICVQKNSEQRGPAIVDGKKKLHTSTTMAKSRQNSKGLMRDEHYFAPKSHERDAKMAEEKDQDPRKSLDVFGSQKMKEEEDTVAMNLERKLSVFTWDAIPKAPTGQKKVKNDKEDENRNSDCSSDLFEIENLSGSGQPLFTSQTSDGLPSETETSIELTTASEFEEKQTAEKGAEPPLMAEKGEAEEP 1369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4242243 4252571 + BLOR07436 Blo16g00188 71379

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00188 1369 MobiDBLite consensus disorder prediction 1230 1258 - -
Blo16g00188 1369 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 381 906 IPR004159 GO:0008168
Blo16g00188 1369 Coils Coil 260 284 - -
Blo16g00188 1369 MobiDBLite consensus disorder prediction 98 135 - -
Blo16g00188 1369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 494 708 IPR029063 -
Blo16g00188 1369 PANTHER METHYLTRANSFERASE PMT18-RELATED 381 906 - -
Blo16g00188 1369 MobiDBLite consensus disorder prediction 1305 1344 - -
Blo16g00188 1369 MobiDBLite consensus disorder prediction 1345 1369 - -
Blo16g00188 1369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 823 966 IPR029063 -
Blo16g00188 1369 MobiDBLite consensus disorder prediction 1287 1304 - -
Blo16g00188 1369 MobiDBLite consensus disorder prediction 84 143 - -
Blo16g00188 1369 Pfam Putative zinc finger motif, C2HC5-type 161 201 IPR009349 GO:0005634|GO:0006355|GO:0008270
Blo16g00188 1369 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 915 1005 IPR004159 GO:0008168
Blo16g00188 1369 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 472 892 IPR004159 GO:0008168
Blo16g00188 1369 Coils Coil 702 722 - -
Blo16g00188 1369 MobiDBLite consensus disorder prediction 1276 1369 - -
Blo16g00188 1369 Gene3D Vaccinia Virus protein VP39 540 754 IPR029063 -
Blo16g00188 1369 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 913 1014 IPR004159 GO:0008168
Blo16g00188 1369 PANTHER METHYLTRANSFERASE PMT18-RELATED 913 1014 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00188 - - - jre:108995455 1073.54
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00109 Blo-Chr3:3394927 Blo16g00188 Blo-Chr16:4242243 0 dispersed
Blo06g00905 Blo-Chr6:32316121 Blo16g00188 Blo-Chr16:4242243 0 dispersed
Blo11g00770 Blo-Chr11:11043836 Blo16g00188 Blo-Chr16:4242243 0 dispersed
Blo16g00188 Blo-Chr16:4242243 Blo19g00119 Blo-Chr19:3402907 0 dispersed
Blo19g00148 Blo-Chr19:5176248 Blo16g00188 Blo-Chr16:4242243 4.21E-146 dispersed
Blo11g00769 Blo-Chr11:10973526 Blo16g00188 Blo-Chr16:4242243 3.73E-13 wgd
Blo13g00011 Blo-Chr13:126399 Blo16g00188 Blo-Chr16:4242243 4.71E-08 wgd
Blo16g00188 Blo-Chr16:4242243 Blo04g00769 Blo-Chr4:7382206 3.92E-150 wgd
Blo16g00188 Blo-Chr16:4242243 Blo06g00904 Blo-Chr6:32311039 8.94E-15 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g540 . Blo16g00188 . . . Bpe13g00287 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone16ag0161 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008262 1 1 3 0 2 1 2 1 1 1 1 1 1 1 1 2 1 0 2 1 1 1 1 1 1 1 1 2 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00188 Blo_Chr16 FPKM 4.349607 3.84591 1.305888 1.438561 3.646351 3.463617 2.880099 0.0 0.0 0.0