Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00193 ATGGAGGTCGCGTTTAGCTATGGAGGTTTAGACATGGGGGAGAAGACGCTTGCTGAAAGCAGCCGCCATGATTTTGTTTTGAAGGTTCCATTTTTCACTGAAAGAGAGAAGATCTCCATGGAGCCTTACGTAGTTGAATCTTCTGCATGTCAAAAAGATCAGGAACGTGATAATCTTCAGTTTATCAGAGCTGAAATGGATGAGGTCAGAGAAGAAAATCAAAGGCTAAAGACGTGCATTGATAGAATCATGAGAGACAGCGAGATTCTTCAAACGACAATCTTCAGCAAATTGCAAGACGGGATGAAAAATGCCGAAACGAACAAGATGGATCGAGAAATTGACGGATCCGAGCTCGTTTCACTGAGTCTCGGATCCTATCCAATGAACCCTAAAAAACCGAAATCAAAGATCGGAGAAATGGAAGGAGGGTTAAGTCTCGGACTCAAATCAAACTTATTCGAAGCTTCTTTAAAACCGAGCGAAAGTGATGGAAAGTGTTTGGAAGAGGGTAAGGAAGTCGAAGCTGCCGAGACATGGCCACCTAGTAAAGTTTTGAAGACGATGAGATCGAGCGAAGAAGAAAGTGAAATTTCCCAAAGAAATCCTCCAAAAAGAGCTAGGGTTTCTGTGAGAGCTAGATGTGAGACTCCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGGCAGAAACTTGCAAAAGGGAATCCATGCCCTAGAGCTTATTTCCGCTGCACTGGATCACCAACTTGTCCCGTTAGAAAACAGGTGCAAAGATGTGCAGAAGACATGAGAATTTTAACAACCACCTACGAAGGAAATCACAACCATCATCTTCCTCCTGCAGCCACTGCCATGGCGTCCACCACTTCTGCTGCTGCTTCAATGCTCCTATCTGGATCAACCTCATCTTCCATTCCCGATCCTTACGGATTAAACTTTCATCTCTCCGATGTCACAAACCACAGACCCTTTCTCTCATCTGCCTCTTCTTCTCACCCAACAATCACCTTAGACCTCACTTCTTCAAACCCTTCTTCTTCTTCTTCTTCGAGCTTTTCTCAGAGATACTCTTCCAGTAGCCTTAACTTTGGATCATGGAGGAATGGGGACAATAGCAATAACTACCAAACAGGAACCATTGATTACGGAGGGAAGCCTCTGCAAGATAATATCTATCAGACCCTTTTACTGAAGAACAATTCCGCCATTAATGCAGCTCCTTCTTCTCAACAAGCTTCACCAGACACAATTTCTGCAGCAACAAAGGCACTAACTGCAGACCCAAGCTTTCAATCTGCACTAAAAGCTGCACTCTCCTTGATTATGGACAGTGATAACAGTAAAGGCGTTGCCCAGAGATTTAAGTGGCAAGAGCAGCCATTATTTTCAGTAACCAAGCCAAAAGAAGCATTTGCAAAAAGGGCATTGACACAATTGGATTCTAAGATCGTATTTAGATGCTGTTCGTTATTGTTTTTTATTCTTGCGTACAAAAATTTCGGGAATGTTACATGTATTTACACTGTAATTTTTTTACCGCTTTGCAGACAGAGCTATTTGTTTGTAGTGAAAAAGTTTGACCTTAAATATACAAATGAGAAACAAGTATTGGTTTCTGCCAAGGACTCAGAAATTGTTCCAGCTGTGGATGCTCCTGTGCTTTCTCGTACATCCGTGGATAAAAATGAAAGGAAGTTGGAGGTAAAGAACAATGAAGCTGCAAGTTTATCACACGGGAAATCTACCGGAAATCAAGATACTGAAATCCAAGGGTCGACATGCGAAGATTCACTTGTTGATCCTGAAAAAATCCTCCGCGAGAAAGCAGCAATAAAGGCGCAGGCTGCTTTTAGGGGTTATTTGGCTCGTCGGGCACTTCGCACCCTCAAAGGTATTATAAGGTTGCAGGCACTTATACGAGGGCACTTGGTTAGAAGACAAGCTGTTGCTACGCTAAGCTGTATGCTGAGAATTGTTAAATTTCAAGCCGTTATTAGGGGGAGGATCGTGAGACATTCTGATGAAGTGAAAAGAAAGTGCATAGTTGTTAAGCCTATGGAACAACCATTAGTTGATCCTGCTGAAGTTAACCTTTCCGCTCGTATGGCAAAGTTTACTGCAAACATTTTTATTTTCAAGTTGGTTGCTTCATCTCCTTCCGCAAAGCCTCTTCAGCTCCATTACGATACCGAGGATCAAAATTCAGTCTCTAGCTGGTTGGAACGCTGGTCTAAGATCCAATTCTGGAAACCACTTCCACGACCAAAAAAGGTAGCTGAACCCAAATCCCAGAAAAAGCAGGGTAATGGTCAAATTTCGGAAGCACAATCTATCAGATCAAAGCGCACAAGGAGACTTCCTGGGGCTAACAATGACACTACCCCTGTGCAAACGTCCTCTGAAATCGAGAAACCCAAACGAAATCTCAGGAAAGTTTCAGCCCATCCAGTAGATCAGGTGCAGGAACATCCTCAAAGTGAGCTCGAAAAAGTGAAGCGGAGCTTAAGGAAGGTTCATAATTCTATACCGGATAACTCAGTACAAATGGAAGCTGAAACATTAAAGCAAAAGGAGATTTTAGAGAAGAGTCCAGGTGCTTCTGGCAGTGAGCTTTTCGAAAGTGGCGCAAATAACTTTAATGAAAAAATGAAGAAAGCGACACCAGTAATATCCAATGTGTCTAATGAAGAAATAAAGCCTGAGCCATTAGCGATGGAAGAGATTCTTGAAGATCAAGTTGTAGCAGATTTAAAGCTTTTAGAAGAGAACAACGATAAAGATCAAATCACTCACGAAGGAGATGCTCTCGAGACAAAGGTTTTGACAGAGAACCACAGTAAAGATGCGAATATTTCAGTCATGAATGGGGAATTGATCCAGAAGGAAGATTTGCTGAATAGTGAGAATCAGAAATCTAGCAAGAAAGTCTTGACTCCGGCAAAGCTAGCAGAAAACGGGTTGCAAAATAGTCCCACTTTACCAAGTTACATGGCAGCTACTGAATCTGCCAAGGCAAAGCTAAGAGCACAAGGATCACCCAGCAAAGGTAATACAAGCAGACTGGAGAAGATAAAGTTTGAAAAAGAAGGATTTGCAGGAGCAATTAAGCTGGGTTTTCCCAAGGGGCTGCCTGGTTCTGAGTACTTTATGGAGTGTCCTTCATGTGGGTGTGGAAGTGGGAGTGGGAGTGGGAGTGGGAGTGGGAGTGAATGCATGTACATCATAGGTTTTTATGATTGTTTTCTATAA 3255 42.61 MEVAFSYGGLDMGEKTLAESSRHDFVLKVPFFTEREKISMEPYVVESSACQKDQERDNLQFIRAEMDEVREENQRLKTCIDRIMRDSEILQTTIFSKLQDGMKNAETNKMDREIDGSELVSLSLGSYPMNPKKPKSKIGEMEGGLSLGLKSNLFEASLKPSESDGKCLEEGKEVEAAETWPPSKVLKTMRSSEEESEISQRNPPKRARVSVRARCETPTMNDGCQWRKYGQKLAKGNPCPRAYFRCTGSPTCPVRKQVQRCAEDMRILTTTYEGNHNHHLPPAATAMASTTSAAASMLLSGSTSSSIPDPYGLNFHLSDVTNHRPFLSSASSSHPTITLDLTSSNPSSSSSSSFSQRYSSSSLNFGSWRNGDNSNNYQTGTIDYGGKPLQDNIYQTLLLKNNSAINAAPSSQQASPDTISAATKALTADPSFQSALKAALSLIMDSDNSKGVAQRFKWQEQPLFSVTKPKEAFAKRALTQLDSKIVFRCCSLLFFILAYKNFGNVTCIYTVIFLPLCRQSYLFVVKKFDLKYTNEKQVLVSAKDSEIVPAVDAPVLSRTSVDKNERKLEVKNNEAASLSHGKSTGNQDTEIQGSTCEDSLVDPEKILREKAAIKAQAAFRGYLARRALRTLKGIIRLQALIRGHLVRRQAVATLSCMLRIVKFQAVIRGRIVRHSDEVKRKCIVVKPMEQPLVDPAEVNLSARMAKFTANIFIFKLVASSPSAKPLQLHYDTEDQNSVSSWLERWSKIQFWKPLPRPKKVAEPKSQKKQGNGQISEAQSIRSKRTRRLPGANNDTTPVQTSSEIEKPKRNLRKVSAHPVDQVQEHPQSELEKVKRSLRKVHNSIPDNSVQMEAETLKQKEILEKSPGASGSELFESGANNFNEKMKKATPVISNVSNEEIKPEPLAMEEILEDQVVADLKLLEENNDKDQITHEGDALETKVLTENHSKDANISVMNGELIQKEDLLNSENQKSSKKVLTPAKLAENGLQNSPTLPSYMAATESAKAKLRAQGSPSKGNTSRLEKIKFEKEGFAGAIKLGFPKGLPGSEYFMECPSCGCGSGSGSGSGSGSECMYIIGFYDCFL 1084
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4327158 4335699 - BLOR07441 Blo16g00193 71384

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00193 1084 SUPERFAMILY WRKY DNA-binding domain 213 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo16g00193 1084 Gene3D - 607 657 - -
Blo16g00193 1084 ProSiteProfiles IQ motif profile. 632 659 IPR000048 GO:0005515
Blo16g00193 1084 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 454 IPR044810 GO:0003700
Blo16g00193 1084 SMART iq_5 630 651 IPR000048 GO:0005515
Blo16g00193 1084 SMART iq_5 607 629 IPR000048 GO:0005515
Blo16g00193 1084 Pfam IQ calmodulin-binding motif 632 649 IPR000048 GO:0005515
Blo16g00193 1084 Pfam IQ calmodulin-binding motif 609 629 IPR000048 GO:0005515
Blo16g00193 1084 ProSiteProfiles WRKY domain profile. 215 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo16g00193 1084 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 48 454 - -
Blo16g00193 1084 SMART WRKY_cls 220 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo16g00193 1084 MobiDBLite consensus disorder prediction 805 832 - -
Blo16g00193 1084 Pfam Protein of unknown function (DUF4005) 980 1020 IPR025064 -
Blo16g00193 1084 MobiDBLite consensus disorder prediction 184 208 - -
Blo16g00193 1084 MobiDBLite consensus disorder prediction 766 804 - -
Blo16g00193 1084 Gene3D WRKY domain 205 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo16g00193 1084 MobiDBLite consensus disorder prediction 188 202 - -
Blo16g00193 1084 Pfam WRKY DNA -binding domain 221 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo16g00193 1084 MobiDBLite consensus disorder prediction 756 832 - -
Blo16g00193 1084 Coils Coil 52 86 - -
Blo16g00193 1084 ProSiteProfiles IQ motif profile. 608 636 IPR000048 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00193 - - - csv:101214198 499.975
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00761 Blo16g00193 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00300 Blo-Chr15:3385666 Blo16g00193 Blo-Chr16:4327158 7.50E-105 dispersed
Blo15g00772 Blo-Chr15:26458224 Blo16g00193 Blo-Chr16:4327158 5.19E-42 dispersed
Blo16g00193 Blo-Chr16:4327158 Blo13g00406 Blo-Chr13:23662684 1.40E-44 dispersed
Blo13g00018 Blo-Chr13:273344 Blo16g00193 Blo-Chr16:4327158 4.58E-98 wgd
Blo16g00193 Blo-Chr16:4327158 Blo04g00761 Blo-Chr4:7241226 0 wgd
Blo16g00193 Blo-Chr16:4327158 Blo06g00896 Blo-Chr6:32172699 4.86E-48 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g521 Blo04g00761 Blo16g00193 . . . . . . Cmo13g00963 Cmo18g00095 . . . . . Cpe20g00197 . . . . . . . . . . . . . . . Cone2ag0858 Cone16ag0154 . . . Csa01g00786 . Cme12g01757 . . Bda11g01691 . . . . . Sed08g2583 . . Cma13g00933 Cma18g00123 Car13g00773 Car18g00113 Cpe09g01069 . Bhi08g01405 Tan05g2090 Cmetu12g0772 . . . . Cla01g01430 Cam01g1498 Cec01g1538 Cco01g1583 Clacu01g1521 Cmu01g1413 Cre01g1331 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008895 1 3 2 1 1 1 2 0 1 0 0 0 2 1 1 2 0 2 1 0 1 1 1 1 1 0 1 4 0 3 34
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13376 PF13178 DUF4005 6.00E-11 No_clan Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00193 Blo_Chr16 FPKM 13.259706 15.221355 10.484737 10.714588 10.934639 10.730749 11.097413 16.710205 15.970822 16.223648