Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00200 ATGGGTGTTGATTATTACAACATACTGAAAGTGAACAGAAATGCGAGCGAGGACGATTTGAAGAAATCGTACAAGAGATTAGCCAGGATATGGCATCCTGACAAGAATCCGGTAAACAAGCGGGAAGCCGAAGCGAAATTCAAGCAAATTTCTGAAGCTTACGACGTTCTTAGTGATCCTCAGAAGCGTCAGATCTACGATCTTTACGGCGAAGAAGCCCTAAAGTCCGGGCAAGTCCCTCCGCCTTCTCAGCCGCAGCCGTCGATCCAGAACTACCACCGTCAGCCTCCCAACACGACTTCCTTTCGGTTTAATCCTAGGGATGCGGATGATATATACGCGGAGTTTTTTGGGCGGGAGAGCGGCGCCGCTGGTGGTGGTGGTGGCGGTGGGGGGAGAAATAGGGGGGTTTTTAGGACTTCGAATGGGGAGTTCGGGGTTGGTTCTCAAGCGAAGAAGGCTGCTGCGATTGAGAATGTTTTGCTGTGTAGTTTGGAAGAGCTCTTCAAAGGAGCGAAGAAGAAGATGAGGATTTCCAGGAATGTTTATGACGCGTCTGGTAAATTTCGAACTTTGGAAGAGATTTTGATGATCGAGATAAAGCCGGGCTGGAAAAAAGGTACGAAGATCACTTTTCCAGAGAAGGGAAACCAAGAGCCAGGTGTGATTCCAGCAGATCTTGTTTTTGTGATAGATGAGAAACCACATTCTCTCTTTAAGCGGGACGGAAACGATCTGGTGATCGATCAAGAACTAACGCTTCTAGAAGCTCTCACCGGTAAGACTCTAGAACTCACTACGCTTGATGGAAGAAGTCTTATGATTCCTCTAATCGATATAATAAAACCCGGGACTGAGATGGTCGTCCCAAATGAAGGGATGCCAAACTCAAAAGAACCGAGTAGGAAGGGAAATTTGAGGATAAATTTTGATGTTAAATACCCGTCAATGCTTTCTTTGGATCAAAAGTCTGATCTGAAAAGAGAAAGCGATGGGCAGGAAGCTATTTATGGGACTGAGAGGGATTGCCAATTGTGGGGGAGGAATAATTGGGAAATAAGAAACCACATTCGCGGAAGCAAAGGCTTCTACGAAAATGTATACATCCGTGGAAGCGAGAGTTTCCGCAAAAGCAAGCAAAAGGGACATGTTCGTGGAGCAAAGACTTCCAGGAAAAAGTACATGTACGCTAGAGCGAAGGCTTCCGTGGAAACTTATGCATTTGAGGAAGCGAGGGTTTCCGTGGAAGCACTCGCGAGGCACGTGTTTGCTGAAATGGATGATTTTCCCGGAAATGCATGCATCCGCATGAGCGAGAGCTTATCCGAAAATGGACAAGGGGGATACTGTTTGTAG 1356 46.68 MGVDYYNILKVNRNASEDDLKKSYKRLARIWHPDKNPVNKREAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQVPPPSQPQPSIQNYHRQPPNTTSFRFNPRDADDIYAEFFGRESGAAGGGGGGGGRNRGVFRTSNGEFGVGSQAKKAAAIENVLLCSLEELFKGAKKKMRISRNVYDASGKFRTLEEILMIEIKPGWKKGTKITFPEKGNQEPGVIPADLVFVIDEKPHSLFKRDGNDLVIDQELTLLEALTGKTLELTTLDGRSLMIPLIDIIKPGTEMVVPNEGMPNSKEPSRKGNLRINFDVKYPSMLSLDQKSDLKRESDGQEAIYGTERDCQLWGRNNWEIRNHIRGSKGFYENVYIRGSESFRKSKQKGHVRGAKTSRKKYMYARAKASVETYAFEEARVSVEALARHVFAEMDDFPGNACIRMSESLSENGQGGYCL 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4500112 4506043 - BLOR07448 Blo16g00200 71391

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00200 451 Pfam DnaJ C terminal domain 161 315 IPR002939 -
Blo16g00200 451 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Blo16g00200 451 MobiDBLite consensus disorder prediction 75 105 - -
Blo16g00200 451 CDD DnaJ 4 59 IPR001623 -
Blo16g00200 451 SUPERFAMILY HSP40/DnaJ peptide-binding domain 161 236 IPR008971 GO:0006457|GO:0051082
Blo16g00200 451 Gene3D - 236 315 - -
Blo16g00200 451 PANTHER BNAA06G20720D PROTEIN 2 332 - -
Blo16g00200 451 CDD DnaJ_C 157 318 - -
Blo16g00200 451 MobiDBLite consensus disorder prediction 88 105 - -
Blo16g00200 451 Gene3D - 155 234 - -
Blo16g00200 451 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 332 - -
Blo16g00200 451 SUPERFAMILY HSP40/DnaJ peptide-binding domain 239 324 IPR008971 GO:0006457|GO:0051082
Blo16g00200 451 Gene3D DnaJ domain 3 127 IPR036869 -
Blo16g00200 451 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Blo16g00200 451 PRINTS DnaJ domain signature 24 39 IPR001623 -
Blo16g00200 451 PRINTS DnaJ domain signature 42 62 IPR001623 -
Blo16g00200 451 PRINTS DnaJ domain signature 62 81 IPR001623 -
Blo16g00200 451 PRINTS DnaJ domain signature 6 24 IPR001623 -
Blo16g00200 451 Pfam DnaJ domain 4 67 IPR001623 -
Blo16g00200 451 SUPERFAMILY Chaperone J-domain 3 84 IPR036869 -
Blo16g00200 451 SMART dnaj_3 3 62 IPR001623 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00200 K09510 DNAJB4; DnaJ homolog subfamily B member 4 - vvi:100246709 489.189
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00756 Blo16g00200 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00463 Blo-Chr15:7249537 Blo16g00200 Blo-Chr16:4500112 2.41E-115 dispersed
Blo16g00200 Blo-Chr16:4500112 Blo10g00064 Blo-Chr10:612723 1.22E-35 dispersed
Blo16g00200 Blo-Chr16:4500112 Blo04g00756 Blo-Chr4:7153323 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g489 Blo04g00756 Blo16g00200 . . . Bpe13g00271 Bma06g00188 . Cmo13g00951 Cmo18g00102 . . . . . Cpe20g00207 . . . . . . . . . . . . . . . Cone2ag0864 Cone16ag0143 . . . Csa01g00799 Chy12g01317 Cme12g01743 . . Bda11g01684 Bda14g00836 . Bpe15g00616 Bma03g00809 . Sed08g2567 . . . Cma18g00131 Car13g00762 Car18g00123 Cpe09g01061 . Bhi08g01425 Tan05g2072 Cmetu12g0983 Lac10g0382 Hepe07g2276 . . Cla01g01417 Cam01g1483 Cec01g1522 Cco01g1569 Clacu01g1507 Cmu01g1399 Cre01g1319 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006344 2 2 2 2 2 1 2 1 1 1 1 1 0 1 1 2 1 2 2 1 1 1 1 1 1 0 1 3 1 0 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00200 Blo_Chr16 FPKM 7.505825 9.094423 1.150124 1.041013 0.264289 0.0 0.0 0.0 0.0 0.0