Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00208 ATGGCGGCTCTTTCTTCCTCTTCTACTTTGCATGAATATTCTTCCTCCAGGAACCAGTCGTATAGCAGAAAACAGAAATCGCTTGGTCTTCTTTGTTCCAATTTCCTGAGCTTGTATAATCGCGACGGTGTCCACTTAATCGGTCTGGATGATGCTGCATCGAGATTAGGTGTTGAAAGAAGGCGGATCTATGATATTGTAAACGTATTGGAAAGTATAGGGGTTTTAGCGAGGAAGGCAAAGAATCAGTACAGCTGGAAGGGATTTGAAGCTATTCCCGTGGCCTTGCAGCAGCTCAAGGAAGAGGGTTTGAAGGAGAATTTCTGCGCATTTGATGGTAACGACAATGCAAAAATATCATGCGATGAAGATGAAGATGAAACATTGTCTAATCCTGCAACCGGAAGTCAGAACTCAAATTCTTCTCTCCCCAAATTTTCTTCTTCTAAATCAGACAACAGAAGGGAGAAGTCTTTGGCACTTCTTACACAAAATTTTGTCAAGCTATTTATCTGTTCAAAAGTGGATCTCATCTCTCTCGATGAAGCTGCAAAGTTGTTGCTTGGGGATGGTTATAATTCATCAGTAATGAGAACAAAAGTAAGACGGCTCTATGATATTGCAAACGTGCTATCCTCGATGAATCTAATTGAGAAGACCCATGCGTCAGTCACCAGAAAACCGGCATTTAGATGGTTGGGATGGAGGAATGAAGCTAGGAATGAAGTCACTTGTAGCAAGCCGCCTCCAGAATCTAGGAAAAGAGCATTCGGAATAGATGTCTCAAACATCAATATGAAGAAGAACAAAATTGCAACTTCAGCTGCAGAAATTTTGAAGGAGAATTTCAATATTACAAAGTCAGCAAATCAAAATGATTTGATATGTGAGGTTGATAGACATGGTTCCGATAAGGAATATACACAAGGGTCGAAGAGCTACCACTTTGGACCCTTTGCACCTGTAACGGTTGCTAAAGTTGGTCCCAATAACTGCAAAGTGAAGGAAACCCATGATTGGGATAGCCTCGCCTCTGCTTATCGACCTCAGTATCAGAACCAAGCGCTAAAAGCACTCTTCTCCCACTATATGGAAGCATGGAGATCATGGTACTCTGAAGCTGTGAAGAAACCGATAAAGATTTCTTGA 1149 41.6 MAALSSSSTLHEYSSSRNQSYSRKQKSLGLLCSNFLSLYNRDGVHLIGLDDAASRLGVERRRIYDIVNVLESIGVLARKAKNQYSWKGFEAIPVALQQLKEEGLKENFCAFDGNDNAKISCDEDEDETLSNPATGSQNSNSSLPKFSSSKSDNRREKSLALLTQNFVKLFICSKVDLISLDEAAKLLLGDGYNSSVMRTKVRRLYDIANVLSSMNLIEKTHASVTRKPAFRWLGWRNEARNEVTCSKPPPESRKRAFGIDVSNINMKKNKIATSAAEILKENFNITKSANQNDLICEVDRHGSDKEYTQGSKSYHFGPFAPVTVAKVGPNNCKVKETHDWDSLASAYRPQYQNQALKALFSHYMEAWRSWYSEAVKKPIKIS 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4669150 4671574 + BLOR07456 Blo16g00208 71399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00208 382 MobiDBLite consensus disorder prediction 121 151 - -
Blo16g00208 382 PANTHER TRANSCRIPTION FACTOR E2F 5 374 IPR015633 GO:0000978|GO:0006357
Blo16g00208 382 SUPERFAMILY Winged helix DNA-binding domain 22 86 IPR036390 -
Blo16g00208 382 Pfam E2F/DP family winged-helix DNA-binding domain 156 234 IPR003316 GO:0005667|GO:0006355
Blo16g00208 382 Pfam E2F/DP family winged-helix DNA-binding domain 24 88 IPR003316 GO:0005667|GO:0006355
Blo16g00208 382 Gene3D - 148 235 IPR036388 -
Blo16g00208 382 Gene3D - 18 90 IPR036388 -
Blo16g00208 382 MobiDBLite consensus disorder prediction 130 148 - -
Blo16g00208 382 SUPERFAMILY Winged helix DNA-binding domain 156 235 IPR036390 -
Blo16g00208 382 PANTHER E2F TRANSCRIPTION FACTOR-LIKE E2FF 5 374 - -
Blo16g00208 382 SMART E2F_TDP_2 23 88 IPR003316 GO:0005667|GO:0006355
Blo16g00208 382 SMART E2F_TDP_2 154 234 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00243 Blo-Chr14:2153627 Blo16g00208 Blo-Chr16:4669150 4.13E-12 dispersed
Blo16g00208 Blo-Chr16:4669150 Blo12g00527 Blo-Chr12:23213746 6.75E-10 dispersed
Blo16g00208 Blo-Chr16:4669150 Blo04g00746 Blo-Chr4:7053527 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13379 PF02319 E2F_TDP 1.60E-20 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00208 K09391 - csv:101219210 506.138