Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo16g00208 | ATGGCGGCTCTTTCTTCCTCTTCTACTTTGCATGAATATTCTTCCTCCAGGAACCAGTCGTATAGCAGAAAACAGAAATCGCTTGGTCTTCTTTGTTCCAATTTCCTGAGCTTGTATAATCGCGACGGTGTCCACTTAATCGGTCTGGATGATGCTGCATCGAGATTAGGTGTTGAAAGAAGGCGGATCTATGATATTGTAAACGTATTGGAAAGTATAGGGGTTTTAGCGAGGAAGGCAAAGAATCAGTACAGCTGGAAGGGATTTGAAGCTATTCCCGTGGCCTTGCAGCAGCTCAAGGAAGAGGGTTTGAAGGAGAATTTCTGCGCATTTGATGGTAACGACAATGCAAAAATATCATGCGATGAAGATGAAGATGAAACATTGTCTAATCCTGCAACCGGAAGTCAGAACTCAAATTCTTCTCTCCCCAAATTTTCTTCTTCTAAATCAGACAACAGAAGGGAGAAGTCTTTGGCACTTCTTACACAAAATTTTGTCAAGCTATTTATCTGTTCAAAAGTGGATCTCATCTCTCTCGATGAAGCTGCAAAGTTGTTGCTTGGGGATGGTTATAATTCATCAGTAATGAGAACAAAAGTAAGACGGCTCTATGATATTGCAAACGTGCTATCCTCGATGAATCTAATTGAGAAGACCCATGCGTCAGTCACCAGAAAACCGGCATTTAGATGGTTGGGATGGAGGAATGAAGCTAGGAATGAAGTCACTTGTAGCAAGCCGCCTCCAGAATCTAGGAAAAGAGCATTCGGAATAGATGTCTCAAACATCAATATGAAGAAGAACAAAATTGCAACTTCAGCTGCAGAAATTTTGAAGGAGAATTTCAATATTACAAAGTCAGCAAATCAAAATGATTTGATATGTGAGGTTGATAGACATGGTTCCGATAAGGAATATACACAAGGGTCGAAGAGCTACCACTTTGGACCCTTTGCACCTGTAACGGTTGCTAAAGTTGGTCCCAATAACTGCAAAGTGAAGGAAACCCATGATTGGGATAGCCTCGCCTCTGCTTATCGACCTCAGTATCAGAACCAAGCGCTAAAAGCACTCTTCTCCCACTATATGGAAGCATGGAGATCATGGTACTCTGAAGCTGTGAAGAAACCGATAAAGATTTCTTGA | 1149 | 41.6 | MAALSSSSTLHEYSSSRNQSYSRKQKSLGLLCSNFLSLYNRDGVHLIGLDDAASRLGVERRRIYDIVNVLESIGVLARKAKNQYSWKGFEAIPVALQQLKEEGLKENFCAFDGNDNAKISCDEDEDETLSNPATGSQNSNSSLPKFSSSKSDNRREKSLALLTQNFVKLFICSKVDLISLDEAAKLLLGDGYNSSVMRTKVRRLYDIANVLSSMNLIEKTHASVTRKPAFRWLGWRNEARNEVTCSKPPPESRKRAFGIDVSNINMKKNKIATSAAEILKENFNITKSANQNDLICEVDRHGSDKEYTQGSKSYHFGPFAPVTVAKVGPNNCKVKETHDWDSLASAYRPQYQNQALKALFSHYMEAWRSWYSEAVKKPIKIS | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 4669150 | 4671574 | + | BLOR07456 | Blo16g00208 | 71399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo16g00208 | 382 | MobiDBLite | consensus disorder prediction | 121 | 151 | - | - | |
Blo16g00208 | 382 | PANTHER | TRANSCRIPTION FACTOR E2F | 5 | 374 | IPR015633 | GO:0000978|GO:0006357 | |
Blo16g00208 | 382 | SUPERFAMILY | Winged helix DNA-binding domain | 22 | 86 | IPR036390 | - | |
Blo16g00208 | 382 | Pfam | E2F/DP family winged-helix DNA-binding domain | 156 | 234 | IPR003316 | GO:0005667|GO:0006355 | |
Blo16g00208 | 382 | Pfam | E2F/DP family winged-helix DNA-binding domain | 24 | 88 | IPR003316 | GO:0005667|GO:0006355 | |
Blo16g00208 | 382 | Gene3D | - | 148 | 235 | IPR036388 | - | |
Blo16g00208 | 382 | Gene3D | - | 18 | 90 | IPR036388 | - | |
Blo16g00208 | 382 | MobiDBLite | consensus disorder prediction | 130 | 148 | - | - | |
Blo16g00208 | 382 | SUPERFAMILY | Winged helix DNA-binding domain | 156 | 235 | IPR036390 | - | |
Blo16g00208 | 382 | PANTHER | E2F TRANSCRIPTION FACTOR-LIKE E2FF | 5 | 374 | - | - | |
Blo16g00208 | 382 | SMART | E2F_TDP_2 | 23 | 88 | IPR003316 | GO:0005667|GO:0006355 | |
Blo16g00208 | 382 | SMART | E2F_TDP_2 | 154 | 234 | IPR003316 | GO:0005667|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo14g00243 | Blo-Chr14:2153627 | Blo16g00208 | Blo-Chr16:4669150 | 4.13E-12 | dispersed | |
Blo16g00208 | Blo-Chr16:4669150 | Blo12g00527 | Blo-Chr12:23213746 | 6.75E-10 | dispersed | |
Blo16g00208 | Blo-Chr16:4669150 | Blo04g00746 | Blo-Chr4:7053527 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13379 | PF02319 | E2F_TDP | 1.60E-20 | CL0123 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo16g00208 | K09391 | - | csv:101219210 | 506.138 |