Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00227 ATGCAGAGCACGGCCTTTACGATTTCTCCTTCATTGCCTCTTCTCAAGTCTCGAAGGCAATATAATTCTGCTTTCAGCCATGGATTCAATCCCATGCGTTTTTCTTGCTCTTCTTCCGATCAGAACAGCATAAAAATCTCCGTCAATGAGTCTCTCTCTTCGTCTTGGCCTTCCCGATCGTGGTCATTGTCGTCATCGTCTTTTCCGTCGTCCAAGGTAAGTCCGTGGACCGGTGCGCCGCTGCTCGCTTCTGAGTCAGGAAAGAGTGCGTTCGAGGTACGAGCTACTTCGGTGCCGGAGAGTGCAGGGGAGGATGACGGTGCTGGGGGCTTGAGGAAAACGCTTGAGCTGGGAATGTTGATGGGTCTCTGGTACCTTTTCAACATCTATTTCAATATCTACAACAAGCAGGTTCTTAAGGTGTATCCATTCCCTGTAACCGTCACTACAGTTCAATTTGCTGTTGGCACTCTGATTGTTCTTTTTATGTGGGGTTTTAATCTCTATAAAAAGCCAAAGATCAGTGGTGTACAGCTTGCCGCTATTCTTCCATTGGCAGCTGTTCATACGCTGGGAAACCTTTTTACGAACATGAGTCTTGGGAAAGTTGCCGTATCATTCACTCACACAATCAAAGCTATGGAGCCTTTATTTTCCGTTGTCCTATCTGCAATGTTTCTAGGAGAGACACCTACTCCCTGGGTGGTTATTTCTCTTCTACCAATTATTGGTGGAGTAGCATTAGCATCAGCAACTGAGGCCTCATTTAATTGGTCCGGGTTTTCCAGTGCAATGGCTTCCAATTTGACTAATCAATCACGAAATGTCCTCAGCAAAAAGCTCATGGTGAAAAAAGAGGTGTTTTGCGGCTTGAGAAATTTTTTTTCGATATTGGCAGTTCTGAACTGTCGTCTGACAAGCATATTGTTCTTAAAACAGGAGTCATTGGACAACATCACTCTCTTCTCAATAATTACCATTATGTCTTTTCTCTTGTTAGCACCAGTGGCTTTGTTCATGGAAGGTGTCAAGTTTACCCCGGCATATCTGCAATATGCAGGATTGAATGTCAGACAAGTGTTCATTAGATCTCTTCTTGCTGCTCTCTGTTTTCATGCTTATCAACAGGTTTCTTACATGATATTACAGAGGGTATCGCCAGTTACCCACTCAGTTGGCAACTGTGTGAAGCGGGTGGTGGTCATTGTGAGCTCTGTTATCTTCTTCCAAACACCCGTTTCTCCTATCAATAGTTTTGGCACCGCAGTGGCGCTTGCTGGAGTTTTCTTGTATTCAAGGGTCAAGCGTATAAAGCCAAAGGCCAAAACAGTTTGA 1335 44.57 MQSTAFTISPSLPLLKSRRQYNSAFSHGFNPMRFSCSSSDQNSIKISVNESLSSSWPSRSWSLSSSSFPSSKVSPWTGAPLLASESGKSAFEVRATSVPESAGEDDGAGGLRKTLELGMLMGLWYLFNIYFNIYNKQVLKVYPFPVTVTTVQFAVGTLIVLFMWGFNLYKKPKISGVQLAAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPLFSVVLSAMFLGETPTPWVVISLLPIIGGVALASATEASFNWSGFSSAMASNLTNQSRNVLSKKLMVKKEVFCGLRNFFSILAVLNCRLTSILFLKQESLDNITLFSIITIMSFLLLAPVALFMEGVKFTPAYLQYAGLNVRQVFIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSFGTAVALAGVFLYSRVKRIKPKAKTV 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5094729 5097802 + BLOR07475 Blo16g00227 71418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00227 444 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 115 442 IPR004696 GO:0016021|GO:0022857|GO:0055085
Blo16g00227 444 PANTHER SOLUTE CARRIER FAMILY 35 49 284 - -
Blo16g00227 444 PANTHER SOLUTE CARRIER FAMILY 35 310 419 - -
Blo16g00227 444 Pfam Triose-phosphate Transporter family 116 432 IPR004853 -
Blo16g00227 444 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 310 419 - -
Blo16g00227 444 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 49 284 - -
Blo16g00227 444 SUPERFAMILY Multidrug resistance efflux transporter EmrE 327 436 - -
Blo16g00227 444 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 250 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00659 Blo-Chr11:7046379 Blo16g00227 Blo-Chr16:5094729 2.89E-148 dispersed
Blo14g00408 Blo-Chr14:4505368 Blo16g00227 Blo-Chr16:5094729 1.82E-52 dispersed
Blo15g00265 Blo-Chr15:2848875 Blo16g00227 Blo-Chr16:5094729 4.07E-39 dispersed
Blo16g00227 Blo-Chr16:5094729 Blo18g00185 Blo-Chr18:1771247 8.72E-17 dispersed
Blo16g00227 Blo-Chr16:5094729 Blo13g00127 Blo-Chr13:3700728 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00227 K15283 - csv:101203848 588.186