Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00228 ATGGAAGGGTGTGCAATCCCACATCGACTTGGGGAAGTAAAGAGAGCAGAATATAAGTGGGTAGCTCTCCTACCCCAACAGACCAATTTTGGGTGGATAAGCCACACCAAGAACAAATCTGTGCAAGCTGCGGCCCAAAGCGGACAATATCTATTGGGCCAAGATGGAACTTTGACGGCTGTTCAAACTCTAGCATCAACTGCACTTTGTGGCGTTATCCACTCGATTGTTGGTGGACAGCCTCTGCTCATCCTTGGGGTTGCTGAACCAACAGTTCTGATGTATACATTCATGTTCAACTTTGCAAAAGATAGAAAGGATTTGGGTCAAGATCTTTTCTTAGCCTGGAGTGGATGGGTATGCGTATGGACAGCTATATTGCTCTTCTTATTGGCCATTTTGGGAGCCTGTTCCATAATCAATAGGTTTACTCGTCTTGCCGGTGAATTATTTGGTCTCCTCATTGCAATGCTTTTTATGCAGCAGGCCATTCGAGGAGTTGTGGAGGAATTTGGCATACCCCAGAGAGAAAATCCTAATCAAACCGCTCTCCTGCTATCTTGGCGATTTGGCAATGGAATGTTTGCTCTGGTTTTGTCATTTGGTCTTCTTCTCACTGCATTAAGAAGCCGGAAAGCTCGATTCTGGCGATATGGAACAGGCTGGCTAAGAGGCTTTATCGCTGATTATGGGGTTCCGCTCATGATTCTTGTATGGACTGCTATATCTTACATTCCGGTCAATGATGTCCCAAAAGGAATCCCAAGGCGGCTTTTTAGTCCGTACCCTTGGTCTCACGGTGCATACTCGAATTGGACAGTAATGAAGGAGATGTTGAATGTGCCTCCATTGTACATAATTGGAGCATTTATTCCGGCCACCATGATAGCGGTGCTTTATTACTTTGACCACAGTGTTGCATCTCAGCTTGCCCAGCAAAAAGAGTTCAATCTAAAGAAACCAACCTCATATCATTACGATCTTCTTATCTTGGGTTTTCTCGTTATTCTATGCGGGCTGATAGGCATTCCACCTTCGAATGGCGTAATTCCGCAGTCTCCCATGCATACGAAAAGTTTGGCTACCCTTAAGCATCAACTTTTGCGTAATAAAATGCTATCAGTGGCTCGAAAAAGTATCAGAAAAAACATGAACTTGAGTCAATTATATCGGACGATGCAAGAAGCGTACAATGAAATGCAGACTCCATTAGTATATCAAAATCCACCTGCTCTGGGTCTGAAAGAGTTGAAGGAATCGACAATCCAATCAGCCTCGTGTAATGGCTATATGGATGCTCCAGTTGATGAGACTGTTTTTGATGTGGATAAGGATATAGATGATCTGCTTCCAGTTGAAGTTAAAGAACAACGCCTTAGCAATTTTCTTCAGGCTTTAATGGTTGGTGGGTGTGTGGCTGCCATGCCTCTTCTGAAGAAGATTCCGACTTCTGTTCTTTGGGGCTACTTCGCATTCATGGCAATCGAAAGCTTGCCCGGAAATCAGTTTTGGGAAAGAATTTTGTTGCTTTTCACTGCTCCGAGTAGACGATACAAGGTGCTGGAGAAATGCCATGCAAGTTTTGTCGAGACAGTGCCGTTCAAAACGATTGCAGCCTTCACCTTGTTCCAGACAGCCTACTTGCTCGTTTGTTTTGGGGTAACATGGATTCCGATCGCCGGAGTTCTTTTTCCGCTCTTGATTATGCTTCTTGTCCCAGTTCGGCAGTATTTCCTCCCCAAGTTTTTCAAAAGCGCTCATCTTCAAGATTTGGATGCTGCAGAATACGAGGAAGTGCCTGCAATTGCGTTTAATCCGTCGTCCGAAGAAAGAACTCTTAGCATGGATGGTGGTGAACTACTGGATGAGATGATCACGAAAAGCCGAGGAGAGATTCGAGGAACTCGAAGTCCAAAAATAACGAGTTCAACACCTACTTCTCTAGACAGCATAAAGCCTGCATATAGCCCTCGGGTGAAGGAGCTGAGAGGGGAGGGAAGCCCTCGATTGGGTGGAAAAGGATATGCCGGGAGGAAAACTCCGAGTCATGGAACGAGTGTGTTCAGAGAGAGCTTGCATGGTTCTTCTTCTTCGTCTTAG 2100 45.1 MEGCAIPHRLGEVKRAEYKWVALLPQQTNFGWISHTKNKSVQAAAQSGQYLLGQDGTLTAVQTLASTALCGVIHSIVGGQPLLILGVAEPTVLMYTFMFNFAKDRKDLGQDLFLAWSGWVCVWTAILLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGIPQRENPNQTALLLSWRFGNGMFALVLSFGLLLTALRSRKARFWRYGTGWLRGFIADYGVPLMILVWTAISYIPVNDVPKGIPRRLFSPYPWSHGAYSNWTVMKEMLNVPPLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPTSYHYDLLILGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKMLSVARKSIRKNMNLSQLYRTMQEAYNEMQTPLVYQNPPALGLKELKESTIQSASCNGYMDAPVDETVFDVDKDIDDLLPVEVKEQRLSNFLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEKCHASFVETVPFKTIAAFTLFQTAYLLVCFGVTWIPIAGVLFPLLIMLLVPVRQYFLPKFFKSAHLQDLDAAEYEEVPAIAFNPSSEERTLSMDGGELLDEMITKSRGEIRGTRSPKITSSTPTSLDSIKPAYSPRVKELRGEGSPRLGGKGYAGRKTPSHGTSVFRESLHGSSSSS 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5098290 5106172 - BLOR07476 Blo16g00228 71419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00228 699 MobiDBLite consensus disorder prediction 635 651 - -
Blo16g00228 699 Pfam HCO3- transporter family 452 542 IPR011531 GO:0006820|GO:0016021
Blo16g00228 699 Pfam HCO3- transporter family 194 365 IPR011531 GO:0006820|GO:0016021
Blo16g00228 699 Pfam HCO3- transporter family 55 171 IPR011531 GO:0006820|GO:0016021
Blo16g00228 699 MobiDBLite consensus disorder prediction 684 699 - -
Blo16g00228 699 PANTHER BORON TRANSPORTER 2-RELATED 54 682 - -
Blo16g00228 699 MobiDBLite consensus disorder prediction 632 699 - -
Blo16g00228 699 PANTHER ANION EXCHANGE PROTEIN 54 682 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00379 Blo-Chr12:20242750 Blo16g00228 Blo-Chr16:5098290 0 dispersed
Blo16g00228 Blo-Chr16:5098290 Blo17g00026 Blo-Chr17:138784 0 dispersed
Blo16g00228 Blo-Chr16:5098290 Blo04g00732 Blo-Chr4:6791446 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00228 K24194 - vvi:100251908 1097.42