Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00238 ATGAAAAGATTGAACTGTTTCAAGCCCATTACAGACAATGGGAAGCTGGTGAGGAGGCTGTCGTTAGGAGAGTACAGGCGAGCAGTGTCTTGGTCCAAGTATTTGGTTTCTTCAGGGGGAGAGATAAAAGGGGAAGGAGAGGAGGAATGGAGTGCCGACATGTCGCAGCTGTTCATTGGGTGCAAATTTGCCGCCGGAAGACATAGCAGAATCTACAGAGGAGTTTATAAACAGAAAGATGTCGCGATTAAGCTGATTAGTCAGCCTGAGGAAGACGAAGAGTTGGCTTCTATGCTTGAAAAACAGTTTATTTCAGAAGTCGCTTTGTTGTTTCCTTTGAAGCATCCTAATATCATCACTTTCATAGCAGCTTGTAAGAAACCTCCTGTATTCTGCATTATCACTGAGTACATGGCTGGAGGTTCATTGAGAAAGTTCCTCCACCAACAAGAGCCACATTCTCTTCCCCTCAATTTGGTTCTGAAACTGGCGCTCGATATTTCTCGCGGAATGAAGTATCTTCACACTCGGGGAATTCTTCATCGAGACCTTAAATCTGAGAATCTACTTCTCGACGAAGACATGAACGTAAAGGTCGCCGATTTCGGCATATCGTGTTTGGAATCTCAGTCCGGAAGTGCCAAAGGCTTTACGAGTACTTATCGTTGGATGGCTCCCGAAATGATCGAAGAGAAGCACCATACTAAGAAAGTCGATGTTTATAGCTTCGGCATTGTCTTGTGGGAGCTTTTAACGGCGCTTACTCCGTTCCATGACATGACTCCCGAGCAAGCTGCATTTGCGGTCTGCCAAAAGAATGCAAGGCCGCCTTTGCCGGCAGACTGTCCGGTGGCGTTCGGCCAGCTGATAGAACGGTGCTGGACGAGCAATCCGACTAGACGACCAGATTTTGATGAGATTGTTTTGATATTAGAGAGTTATTCAAGGGGATTAGAACAAGACCCTGATTTATTTTCGTCTTTCGAACCCGGATCCAACGGAGCCCTTTCCATATGCTTTCCGAAATGTAATCGGCTGAAAAGAGGCTCAGCCTCTTTGAAACCCACCAAGGTTCGATCTTCTTCTTCCTCTGCGCTTTTCTCTCTTCATTCATTCTTAGCATCTGTTCAAGGGTGTGATTTCTTCTCTGTTGCTTCTCTTCTCCGTATCGTCGATTTCTCATCTCTTGTTCTACTGCGTATGCCAATTTTTTTTCCATTTTGTTGCCATAATTTGGCGTCTGTTGAAAATTTGTTTGAGTCTTCGAAGTTAATTCCGCCTTTCAAGGAGACGAAGCTAGTGGAATAG 1308 45.11 MKRLNCFKPITDNGKLVRRLSLGEYRRAVSWSKYLVSSGGEIKGEGEEEWSADMSQLFIGCKFAAGRHSRIYRGVYKQKDVAIKLISQPEEDEELASMLEKQFISEVALLFPLKHPNIITFIAACKKPPVFCIITEYMAGGSLRKFLHQQEPHSLPLNLVLKLALDISRGMKYLHTRGILHRDLKSENLLLDEDMNVKVADFGISCLESQSGSAKGFTSTYRWMAPEMIEEKHHTKKVDVYSFGIVLWELLTALTPFHDMTPEQAAFAVCQKNARPPLPADCPVAFGQLIERCWTSNPTRRPDFDEIVLILESYSRGLEQDPDLFSSFEPGSNGALSICFPKCNRLKRGSASLKPTKVRSSSSSALFSLHSFLASVQGCDFFSVASLLRIVDFSSLVLLRMPIFFPFCCHNLASVENLFESSKLIPPFKETKLVE 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5450718 5452807 + BLOR07486 Blo16g00238 71429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00238 435 Pfam Protein tyrosine and serine/threonine kinase 61 309 IPR001245 GO:0004672|GO:0006468
Blo16g00238 435 Gene3D Transferase(Phosphotransferase) domain 1 140 327 - -
Blo16g00238 435 SUPERFAMILY Protein kinase-like (PK-like) 46 309 IPR011009 -
Blo16g00238 435 CDD STKc_MAP3K-like 66 311 - -
Blo16g00238 435 PANTHER SERINE-THREONINE PROTEIN KINASE 1 333 - -
Blo16g00238 435 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00238 435 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Blo16g00238 435 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Blo16g00238 435 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Blo16g00238 435 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Blo16g00238 435 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Blo16g00238 435 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Blo16g00238 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Blo16g00238 435 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00238 435 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00422 Blo-Chr8:8287756 Blo16g00238 Blo-Chr16:5450718 1.57E-95 dispersed
Blo14g00025 Blo-Chr14:173351 Blo16g00238 Blo-Chr16:5450718 4.69E-130 dispersed
Blo14g00757 Blo-Chr14:22119798 Blo16g00238 Blo-Chr16:5450718 6.82E-94 dispersed
Blo16g00238 Blo-Chr16:5450718 Blo04g00738 Blo-Chr4:6896254 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84734 PF07714 PK_Tyr_Ser-Thr 1.50E-64 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00238 - - jre:109004095 569.696