Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00241 ATGGATTCTTCGTCTCCATCCGGAGATATGTTGATGTGTTCAAGACCAATGATAGAGAGAAGGCTACGACCGCACCATGACCAACCTCTCAAATGTCCTCGATGCGACTCAACGCACACTAAATTCTGCTACTACAACAACTACAGCCTCTCTCAGCCTAGGTACTTCTGCAAAACCTGTCGGAGATATTGGACAAAAGGAGGAACTCTCCGGAACATTCCAGTTGGCGGTGGCTGTAGAAAAAACAAGAAAGTTTCTTCCAAGAAACCCGATGGAAATGAGCCTATTGTTAGTCAAAATCACCTTGGTTCTTCCTCTCATAACCCCGCTGATATTCACCTTTCTTTTCCTGATCATCAGTTTCAGTTTTCTAACCTCAATAATCTGCTTGCAAACCCTAGTTTCGTGGAGACGAAGCTGATCAATGGTAATAATTCTTACAGAAACTATGATTTCATGGGAAGTGCTGAAATGGGTATGGTGGGTGGGGTTGGACTTGGAGATATGAGTGTTCAAAATCAAAATTTGCGTCAAAATTTTCATGGGTTTTGCTCGCCGTATGGAATCTCCATTGATGGAAATGGAAGCAATGGGGGAACTCATTTCGTGGACGCGTGTCAAAGGCTACTGCCACCTTATCATGATCATGAAGTAATTGATGATCAAAATGGCGGAATTGATGTGAAACCAAATGCTAAGATCTTAGCCCTTGATTGGCAAGAACAAGGCTGTTCAGACTCTGGAAAAGAGACATTCAGTTACATTAACGGCTTTGGATCATCATGGAACCCCATCGTTAATGGCTATGGACCTTCTGGAACCAACCCATTAGTTTAA 837 42.89 MDSSSPSGDMLMCSRPMIERRLRPHHDQPLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKPDGNEPIVSQNHLGSSSHNPADIHLSFPDHQFQFSNLNNLLANPSFVETKLINGNNSYRNYDFMGSAEMGMVGGVGLGDMSVQNQNLRQNFHGFCSPYGISIDGNGSNGGTHFVDACQRLLPPYHDHEVIDDQNGGIDVKPNAKILALDWQEQGCSDSGKETFSYINGFGSSWNPIVNGYGPSGTNPLV 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5559856 5560692 + BLOR07489 Blo16g00241 71432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00241 278 Pfam Dof domain, zinc finger 27 84 IPR003851 GO:0003677|GO:0006355
Blo16g00241 278 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Blo16g00241 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 135 268 IPR045174 GO:0003700|GO:0006355
Blo16g00241 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 141 IPR045174 GO:0003700|GO:0006355
Blo16g00241 278 PANTHER - 135 268 - -
Blo16g00241 278 PANTHER - 1 141 - -
Blo16g00241 278 MobiDBLite consensus disorder prediction 77 105 - -
Blo16g00241 278 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00035 Blo16g00241 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00326 Blo-Chr7:4195737 Blo16g00241 Blo-Chr16:5559856 1.88E-37 dispersed
Blo09g00015 Blo-Chr9:156727 Blo16g00241 Blo-Chr16:5559856 1.88E-37 dispersed
Blo15g00343 Blo-Chr15:4189821 Blo16g00241 Blo-Chr16:5559856 2.69E-33 dispersed
Blo16g00241 Blo-Chr16:5559856 Blo16g00316 Blo-Chr16:8052467 6.59E-32 dispersed
Blo16g00241 Blo-Chr16:5559856 Blo13g01101 Blo-Chr13:33176376 9.67E-40 transposed
Blo16g00241 Blo-Chr16:5559856 Blo03g01106 Blo-Chr3:37521695 1.55E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13383 PF02701 zf-Dof 1.80E-33 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00241 - - rcu:8289002 350.903