Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00243 ATGGGAGTTAAGGTCGCACTCTCTCTCTCTCTCCTCTTCTTCTCTCTCTTTACTTCCGTCGTCTTCTCCTCCCCAGTGAAGGACCCAGAGCTCGTCGTACAGCAAGTACAGAGAAGCATCAATGGCTCCAGGCGGAACTTAGCCTCTCTCTCCTGCGGGACCGGAAACCCCATCGACGACTGCTGGCGGTGCGACCCTAATTGGGAAAAGAATCGACAACGGCTAGCCGACTGCGCGATGGGGTTCGGAAAAAATGCCGTCGGAGGCCGCGACGGTCGGATCTACGTGGTCACCGACGACAGTGACGACGACGCAGTTACTCCAAAACCCGGTACACTCCGATACGCGGTGATTCAAGACGAACCGCTCTGGATAACATTCGCTAGAGACATGGTAATTAAGCTGAAAGAAGAACTGATAATGAATTCTTTCAAAACCATCGACGGGAGAGGGGCCAGCGTCCATATTTCCGGCGGACCTTGCATTACCATACAGTATGTGACTAACATCATAATCCATGGTCTAAATATACACGATTGTAAGCAAGGAGGAAATGCTGACGTGCGGGACTCCCCACAGCACTACGGGTGGAGAACGTTATCGGACGGTGATGGGGTTTCGATCTTCGGTGGAAGTCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGTCAAGACGGTCTGATCGATGCGATTCACGGATCGACTGCTATAACGATATCAAATAACTATTTCACACATCATGATAAGGTAATGTTGTTAGGCCACAGCGATTCATACACTCAGGATAAGAACATGCAAGTCACCATAGCCTTTAATCACTTTGGAGAAGGGCTAGTTCAAAGAATGCCCAGGTGTAGGCATGGGTATTTCCATGTGCTCAACAATGACTATACCCATTGGGAAATGTACGCCATTGGAGGGAGTGCTGACCCTACTATCAACAGCCAAGGCAACCGATTTCTAGCGCCGGACGAACGATTCAGCAAAGAGGTGACGAAGCATGAGGATGCACCAGAGAGTGAGTGGAAGAATTGGAATTGGAGGTCAGATGGAGATTTGATGTTAAACGGTGCGTTTTTTACTCCGTCAGGGATTGGAGCTTCTTCAAGCTACGCCAAAGCTTCCAGCTTGAGTGCTAGGCCATCAAACCTAGTTGGTTCCATTACAGTAGCTGCCGGTGCACTCACCTGCAAAAAGGGCTCGCGTTGCTGA 1215 49.55 MGVKVALSLSLLFFSLFTSVVFSSPVKDPELVVQQVQRSINGSRRNLASLSCGTGNPIDDCWRCDPNWEKNRQRLADCAMGFGKNAVGGRDGRIYVVTDDSDDDAVTPKPGTLRYAVIQDEPLWITFARDMVIKLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGLNIHDCKQGGNADVRDSPQHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCQDGLIDAIHGSTAITISNNYFTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVLNNDYTHWEMYAIGGSADPTINSQGNRFLAPDERFSKEVTKHEDAPESEWKNWNWRSDGDLMLNGAFFTPSGIGASSSYAKASSLSARPSNLVGSITVAAGALTCKKGSRC 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5643367 5644896 - BLOR07491 Blo16g00243 71434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00243 404 SMART amb_all 130 327 IPR002022 -
Blo16g00243 404 PRINTS Pollen allergen Amb family signature 138 154 IPR018082 -
Blo16g00243 404 PRINTS Pollen allergen Amb family signature 202 223 IPR018082 -
Blo16g00243 404 PRINTS Pollen allergen Amb family signature 346 370 IPR018082 -
Blo16g00243 404 PRINTS Pollen allergen Amb family signature 102 127 IPR018082 -
Blo16g00243 404 PRINTS Pollen allergen Amb family signature 78 95 IPR018082 -
Blo16g00243 404 PRINTS Pollen allergen Amb family signature 282 301 IPR018082 -
Blo16g00243 404 PRINTS Pollen allergen Amb family signature 304 323 IPR018082 -
Blo16g00243 404 PRINTS Pollen allergen Amb family signature 375 398 IPR018082 -
Blo16g00243 404 PANTHER PECTATE LYASE 15 401 - -
Blo16g00243 404 SUPERFAMILY Pectin lyase-like 56 395 IPR011050 -
Blo16g00243 404 Gene3D - 55 397 IPR012334 -
Blo16g00243 404 Pfam Pectate lyase 138 321 IPR002022 -
Blo16g00243 404 PANTHER PECTATE LYASE 18-RELATED 15 401 IPR045032 GO:0030570
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00712 Blo16g00243 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00340 Blo-Chr4:2674877 Blo16g00243 Blo-Chr16:5643367 5.55E-157 dispersed
Blo12g00125 Blo-Chr12:8720829 Blo16g00243 Blo-Chr16:5643367 0 dispersed
Blo14g00306 Blo-Chr14:3136127 Blo16g00243 Blo-Chr16:5643367 0 dispersed
Blo14g00307 Blo-Chr14:3143618 Blo16g00243 Blo-Chr16:5643367 3.57E-157 dispersed
Blo17g00352 Blo-Chr17:3723371 Blo16g00243 Blo-Chr16:5643367 2.52E-164 dispersed
Blo10g00424 Blo-Chr10:7553723 Blo16g00243 Blo-Chr16:5643367 0 transposed
Blo13g00089 Blo-Chr13:1548769 Blo16g00243 Blo-Chr16:5643367 4.86E-102 transposed
Blo11g00727 Blo-Chr11:9288708 Blo16g00243 Blo-Chr16:5643367 7.78E-152 wgd
Blo16g00243 Blo-Chr16:5643367 Blo04g00712 Blo-Chr4:6558464 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00243 K01728 - nnu:104593013 726.087