Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00262 ATGGCAGCGCTCCAGATCGGATTGGGGCAGTTCTCTACTTCCTTACAGAAGAGTTCTCCAACAACGGCACCTTGGAGAGAAGGGAGAATTGAGCAAAAGCTAATGGAGAGCCCTTACTTGGATGTTTTTGCTTGGGAGAACAGGTATCAACTAATTAGAGTTCAAGCAAGAGGGCTTGGTGAAAACTGCAAGTGGCTGGAGATGTTTGAAGACGTCAGTGTTGTTATTTTTTGTGTCTCGCTGGGTGGCTATGATCAATATTCAGTCGATGGGAATGGGGATTTAGTAAACAACATGTTACAGAGCGGGAAAGTTTTTGAAAGCCTGGTCTCGAATCCGACCTTTGATCAGACGGACTTCCTTTTGCTACTAAACAAATATGATCAGCTCGAGGAAAAAATTGATCGCCTACCCTTAAATCAGTGTGAATGGTTTGAAGATTTTGATCCAGTGGTAAGCCGCCACCGCTCCCACAACAGCATAAACAGCAGTCCCTCGATGGCTCAGATTGCATTCCACTACATGGCAGTGAAATTTAAGAGGATTTTTTCGTCTCTGACCGGAAGGAGGCTGTATGTTTCGATGGTTAAAGGATTAAAGCCTGATTGCGTCGATGCATCTCTGAGATACGCAAGAGAGTTTTCGAAATGGAATGAAGCGAGAGTAACTTCTGATTTAGCGTACACATCACAACATATGATAAAGAAAATAGATCACAACTCCCTAGGGATGATATAG 738 43.63 MAALQIGLGQFSTSLQKSSPTTAPWREGRIEQKLMESPYLDVFAWENRYQLIRVQARGLGENCKWLEMFEDVSVVIFCVSLGGYDQYSVDGNGDLVNNMLQSGKVFESLVSNPTFDQTDFLLLLNKYDQLEEKIDRLPLNQCEWFEDFDPVVSRHRSHNSINSSPSMAQIAFHYMAVKFKRIFSSLTGRRLYVSMVKGLKPDCVDASLRYAREFSKWNEARVTSDLAYTSQHMIKKIDHNSLGMI 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6130798 6132804 + BLOR07510 Blo16g00262 71453

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00262 245 Pfam G-protein alpha subunit 46 201 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo16g00262 245 ProSiteProfiles G-alpha domain profile. 1 229 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo16g00262 245 Gene3D - 41 224 IPR027417 -
Blo16g00262 245 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 1 47 228 - -
Blo16g00262 245 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 47 228 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo16g00262 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 211 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00262 - - - mcha:111005525 259.996
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo05g00765 Blo16g00262 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00815 Blo-Chr2:28900722 Blo16g00262 Blo-Chr16:6130798 8.34E-55 dispersed
Blo09g00423 Blo-Chr9:15204899 Blo16g00262 Blo-Chr16:6130798 1.57E-50 dispersed
Blo16g00262 Blo-Chr16:6130798 Blo15g00719 Blo-Chr15:23812085 6.14E-58 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi7g851 . Blo16g00262 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi01g01019 . . . Blo05g00765 . . . . . . . . . . . . . . . . Bhi10g02060 Tan05g1363 . . . . . . . . . . . . . . Chy02g00947 .
Vvi17g922 . Blo16g00262 . . . . . Bma12g01280 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone19ag0314 Lsi02g00010 . . Cme12g02053 . . . . Bpe07g01085 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0033901 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00262 Blo_Chr16 FPKM 134.117966 154.347229 147.118332 147.795914 27.042263 25.511341 27.380617 110.810165 111.019974 109.67778