Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00273 ATGGAGAGCAACCAGCAAGCTCAATCCTCTCCTTACCCACCTGCACAGCCTCCTCCGCTGCCTCCTCAGCCGTCTCAATTTCATCACCTTCTCCAGCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCCTACCAGCGCCAAGAAATCGAACAGGTTAACGAGTTTAAAAATCATCAGTTACCCTTGGCTCGAATCAAGAAGATCATGAAAGCAGATGAGGACGTCCGTATGATCTCCTCAGAAGCCCCGATTCTGTTTGCCAAGGCCTGCGAGCTCTTCATCCTCGAACTCACGATTAGGTCGTGGCTTCACGCGGAGGAAAACAAGAGGAGGACTCTGCAGAAGAATGATATATCGGCAGCGATTACGAGGACTGATATCTTCGATTTTTTGGTGGATATTGTACCGAGAGATGAGATCAAGGATGAGGCTGGGTTGGAGAGTGTGGTTGGGGCTACTGCTAGTGGCGTACCCTACTATTACCCTCCTTTAGGACAGCCGGCGGGGACTCCGGCTGGGATGATGATCGGAAGGCCGGCAATGGATCCCACCGGAATGTACATGCAGCCTCCGTCTCAAGCGTGGCAGTCAGTATGGCAGGCGCCGCCGGAGGATGGGACGTATGGGAGTGGCGGAAACACTGGGCTTGGCAATCTTAATGGACAAAGTTCCTTAGATTTTGGCTTTCCCCCTCAGCCGTACTTGGTAGTGTTTCTAGTTGGGGTGAAATTGAGCACTTCTAGAATAGAGGCTGCAGAATAG 762 52.23 MESNQQAQSSPYPPAQPPPLPPQPSQFHHLLQQQQQQLQMFWSYQRQEIEQVNEFKNHQLPLARIKKIMKADEDVRMISSEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDISAAITRTDIFDFLVDIVPRDEIKDEAGLESVVGATASGVPYYYPPLGQPAGTPAGMMIGRPAMDPTGMYMQPPSQAWQSVWQAPPEDGTYGSGGNTGLGNLNGQSSLDFGFPPQPYLVVFLVGVKLSTSRIEAAE 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6419976 6421080 - BLOR07521 Blo16g00273 71464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00273 253 Gene3D Histone, subunit A 25 137 IPR009072 GO:0046982
Blo16g00273 253 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 3 223 - -
Blo16g00273 253 MobiDBLite consensus disorder prediction 11 25 - -
Blo16g00273 253 MobiDBLite consensus disorder prediction 1 26 - -
Blo16g00273 253 SUPERFAMILY Histone-fold 21 131 IPR009072 GO:0046982
Blo16g00273 253 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 3 223 - -
Blo16g00273 253 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 59 122 IPR003958 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00597 Blo-Chr13:28401234 Blo16g00273 Blo-Chr16:6419976 2.13E-61 dispersed
Blo13g00963 Blo-Chr13:31998618 Blo16g00273 Blo-Chr16:6419976 4.55E-11 dispersed
Blo01g00358 Blo-Chr1:4246554 Blo16g00273 Blo-Chr16:6419976 4.62E-08 transposed
Blo16g00273 Blo-Chr16:6419976 Blo04g01166 Blo-Chr4:20154829 8.35E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13386 PF00808 CBFD_NFYB_HMF 7.50E-18 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00273 - - csv:101213576 333.954