Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00282 ATGACGGTGTCCCTCGACGAGAAGAGGAAGAATTTCACCTTGACAAAGTCTGAGGAGGCTTTCAATGCTGCTAAGGAGCTTATGCCTGGAGGAGTGAATTCCCCTGTTCGTGCCTTTAAATCTGTTGGCGGACAACCGATAGTAATTGACAGTGTCAAAGGGTCCCATATGTGGGATATAGATGGAAATGAATACATAGACTATGTTGGTTCTTGGGGACCGGCAATAATCGGACACGCAGATGATGAGGTACTTGCAGCCCTCACTGAAACAATGAAGAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAAAATGTTTTGGCAGAGATGGTGATATCGGCAGTACCAAGTATAGAAATGGTTCGGTTTGTTAACTCAGGAACTGAAGCGTGCATGGGAGTACTACGCCTAGCCCGTGCTTTCACCGGAAAACAGAAGATCATCAAATTTGAGGGCTGCTACCACGGTCATGCAGATCCATTTCTTGTCAAGGCCGGTAGTGGAGTTGCTACATTAGGCCTTCCTGACTCTCCGGGGGTTCCGAAGGCAGCTACCTCAGAGACTCTAACCGCTCCATTCAATGATTTTTCTGCAGTGGATGACCTATTCAAAACCCACAATGGAGAAATCGCAGCAATTATACTCGAACCGGTTGTTGGAAACTCCGGATTCATTCCCCCGAGACCCGATTTTCTCAATGCCATACACAAAATCACCACAGAAAATGATGCCCTTCTCATCTTTGATGAGGTTATGACAGGATTCCGCATATCTTACGGTGGAGCTCAGGAGTACTTTAAAATAACTCCAGATTTGACTACTTTGGGGAAGATAATTGGAGGTGGATTACCAGTAGGAGCATATGGAGGGAGGAAAGAGATAATGGAGATGGTGGCTCCAGCAGGACCCATGTACCAAGCTGGGACCTTGAGTGGAAACCCATTAGCAATGACTGCTGGCATACACACCCTGAAGAGGCTGAAGGAAGTTGGAACTTATGAGTATCTAAACAAAATAACTGGAGAACTAGTACAAGGCATTTTAGGGGCGGGCAAGAAGACGGGCCACAAAATTTGTGGGGGTCACATTAACGGGATGTTCGGGTTTTTCTTCACTGCAGGCCCCGTTTATAACTTTGAAGATGCCAAAAAGAGCGATACAGCAAAATTTGCCAAGTTTTATCAGGGAATGTTGAGGGAAGGAGTGTATTTTGCTCCCTCACAGTTTGAAGCCGGATTTACGAGCTTGGCGCATTCTTCCCTCGATATACAACAAACCATAGCCGCAGCTGAGAAGGTTTTAAGGATGTTG 1314 46.19 MTVSLDEKRKNFTLTKSEEAFNAAKELMPGGVNSPVRAFKSVGGQPIVIDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDEVLAALTETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGKQKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATSETLTAPFNDFSAVDDLFKTHNGEIAAIILEPVVGNSGFIPPRPDFLNAIHKITTENDALLIFDEVMTGFRISYGGAQEYFKITPDLTTLGKIIGGGLPVGAYGGRKEIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEVGTYEYLNKITGELVQGILGAGKKTGHKICGGHINGMFGFFFTAGPVYNFEDAKKSDTAKFAKFYQGMLREGVYFAPSQFEAGFTSLAHSSLDIQQTIAAAEKVLRML 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6747924 6750500 + BLOR07530 Blo16g00282 71473

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00282 438 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 1 435 - -
Blo16g00282 438 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 247 283 IPR005814 GO:0008483|GO:0030170
Blo16g00282 438 Gene3D - 82 330 IPR015421 GO:0003824
Blo16g00282 438 CDD OAT_like 21 435 IPR005814 GO:0008483|GO:0030170
Blo16g00282 438 SUPERFAMILY PLP-dependent transferases 14 436 IPR015424 -
Blo16g00282 438 Gene3D Aspartate Aminotransferase, domain 1 19 431 IPR015422 GO:0003824
Blo16g00282 438 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 16 438 IPR004639 GO:0033014|GO:0042286
Blo16g00282 438 PANTHER BNAA09G06670D PROTEIN 1 435 - -
Blo16g00282 438 Pfam Aminotransferase class-III 46 372 IPR005814 GO:0008483|GO:0030170
Blo16g00282 438 TIGRFAM hemL: glutamate-1-semialdehyde-2,1-aminomutase 16 436 IPR004639 GO:0033014|GO:0042286
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00282 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] - tcc:18605158 789.26
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00696 Blo-Chr11:8214191 Blo16g00282 Blo-Chr16:6747924 2.78E-16 dispersed
Blo16g00282 Blo-Chr16:6747924 Blo04g01150 Blo-Chr4:19285225 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g68 . Blo16g00282 . . . Bpe13g00193 Bma06g00273 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01586 Bda14g01345 . Bpe15g00234 Bma03g01235 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006338 3 1 2 2 2 1 1 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00282 Blo_Chr16 FPKM 16.714521 17.758842 9.238864 9.635961 22.37904 22.895815 24.400681 11.352714 11.815513 12.202479