Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00290 ATGAATCCCTCTTCCGTCTCGCAGAAATCGGGAAAGAAATCCTTAGCTACGCCGGCATTACGCTCTAGGATCCATAGGAAGAGGAAACAGCAGCTCTGTCTTCGGAACCCGTCACGGTTGCACGACCTCAATGCCATTTCCGCCCCCACCCGCAGCATTGAAGCTCCTAAAAGTTTCTTCAGACTTCAGAGTTCCCTGTTTTCACTTCTCAACTCAGAAGTTAGAACTGAAGCGTTAATCGTTATCTTTGTTGCTGTTCGTTCTGAGGTTTCAAGGTTTCGAGATTTTCCGTCTTCATTCGTCTTTAAACAGTCCAGTGGCGGCTTAGATCTGGGATTCAGGGAGTGGATTACCGGCGCTGGCGGTCTTAGTTTGTCTCCAGGCTCCAACAGTCTAGTCTGGGAATGGATTATCGGCGGCTTAAATTTGGGAGTGGGTTACCAGCGACTTAGATCTGTTTCAGTTTGTAATATGACTATTGTTACTAACGTACGCCAGCATAAAACAGGGGAGGTGCTAAACTACGCATCTCCCAACGTCTCGCATCCATCCAATCCTGCCCGTCAATACCACGACAAAAGCCATTTCCCCATAAAAACAGAACAACTTTCCACGCAGACACACGCCGTTACCTGCTTCTCGAATCATGGGTCGACAACTATTAACGGCGCATCTACTCCGTTTACGGCAGCTGCTCTTGTAGCCGCCTTTATTAATCAGCCGAGACCCTCCCGTCTCTTTTTAGCTCTTCTATTGGCTCCACCGGCTGTGGCCGGTAAAAGAGAGTGCAGAACCGGATCTGAGCTGAGAGTTCTCGGAATGGATTCATCTGATGTATCTGTCAAAGGAAATTGCGAGAACGGAAGGGGAGAGTGCTTCTCCGCTGGTTTTAAGGAACACAGCGACGTGAAGATCGGCAAGGATGGACAGAAAGGCTATTCAGCTTCTCCTAAAGAGCTCTGGCATGCTTGTGCTGGTCCTTTGGTAACTGTGCCTCGTGAAAACGAACGCGTCTTTTACTTTCCTCAAGGTCACATCGAGCAGGTGGAGGCATCTACGAATCAGGTGGCAGATCAGCAGATGCCTGTATATGATCTTCCGCACAAAATCCTCTGCCGAGTGGCTAATGTAGTATTGAAGGCTGAACCAGATACAGATGAGGTCTTTGCCCACGTTACCTTGCTTCCAGAACAGAATCAAGATGAGAATGCTGTGGAAAAGGAGTCTCCTCCACCTCCTTCCTCGCGTTTTCATGTACAGTCATTTTGCAAGACTCTTACGGCCTCAGATACTAGTACTCATGGTGGATTTTCTGTTCTGAGGAGGCATGCAGATGAATGCCTTCCGCCCCTGGACATGTCACGGCAGCCTCCTACTCAGGAACTGGTGACCAAGGATTTGCATGGGAATGAATGGCGCTTTCGGCATATTTTTCGAGGTCAACCAAGAAGGCATCTGCTTCAAAGTGGTTGGAGTGTATTTGTCAGCTCCAAGAGACTTGTCGCAGGAGATGCATTCATTTTTTTAAGGATAAGTCCTTCAGAATTCATTGTTCCATATGAGCAATACATGGAGTCTATGAAGAAGACTTACTCAATAGGTCTTCTAGCAATTGTTTTTTTTAGACTTTCTATTATTGATTCTATTCGAAGAAAAATGCTGAAATTCACTGGTACTGTTGTTGGAATTGAAGATTCCGATCCCAAAAGGTGGACAGATTCCAAGTGGAGATGCCTTAAGGTGAGATGGGATGAGACTTCTACCATTCCTCGTCCGGATAGAGTGTCTCCGTGGAAAATTGAACCTGCTCTTACTCCTCCAGCATTAAATCCCATGCCAGTGCCTAGGCCAAAAAGGCCGCGATCGAACATGGTTCCCACGTCCTCTGAGTCCTCGGTCCTTACAAGGGAAGGTTCATCTAGAGTAGACCCTCCAGCAAGTGGGTTTTCGAGGGTCTTGCAAGGTCAAGATTTTTCGATCTTGAGAGACAACATTATGGAAAGTAATGAATGTGAAACTGCGGAGAAGTCTGTTGTTTGGCCACCTTCACTAGATGATGAGAAGAGTGATATGGCATCTGCTTCAAGGAGATTTAGAGCAGAGAACTGGGTTCCTTCTGGAAGCAGTGAACCAACCTACACGGATTTGTTATCAGGTTTTGGGACTAATGGAGAATATTCCCATGGGGTTTCTACTACATTTGGTGATCCAACAATGGTTCGAACTACCAATTCTGTGAGGAAACATGCACTTGGTCAGGATGGCAAGTCTACCAATCTTGGCAACCCATGGCCCATAAGATCTTCTGGTCTGTCACTTACATTAGCAGACTCTAATCAGAAGGGTTCTGTTTGTGCTGGTGATATCTCTTATCAAGCACGGATGAATGACAGATATGGCAGCCTTCTCAATAATCATTCCATACTTCAGGGCCAGAAATTTGAAAATTCCCCTAGCTGTTGGTTGATGCCTCCACCGTTGCAATCTAATCTCGATAATTCAGTTATTTCAAGAGAGCAAAGGGGAAAAAGCATATTGGCACAGAAGCAGGAGACTCTGAAACCCAAAGATGGGAATTGCAAAATCTTTGGTATTTCCCTCATCAGGAACCCTGTGACACCAGGTCCTGTAGTATCAAACAGAGAAATTATTAATGAGCCGGTTATTCAGATGCACCAGATTCCCCTGGACCATACCTGTGAACAAAAGTCTGAAGAGATGAAATGCGCGGCTTCCGCAGGTAATCAGCTTGCTGCTAATGAACCGGACAAACAACCACAAACAGGTGGAATACATGTAAAGGATGTTCAAAGTAAAGGGCAAAGTGGGTCATCTAGGAGTTGTACTAAGGTCCATAAGCAGGGTATTGCACTTGGAAGGTCAGTAGATCTCAGTAAGTTCAACAACTATGATGAACTTATTACTGATTTGGATCAGTTGTTTGAGTTTGGAGGAGAGTTAGCAGCTCCGATAAAGAATTGGCTTATTGTCTACACCGATGATGAAGGTGACATGATGCTTGTTGGAGATGATCCGTGGCATGAATTTTGTGGCATGGTTCGCAAAATTTTTATATATACTAGAGAGGAGGTTCAAAGGATGAATCCAGGATCCTTGACTATGAAAGCCGAGGAGTCTGAAGTTGAAGTTGAAGTTGACGTTGAAGATTCAAAAGAGGCTAAATGTCAGCCTTTATCTTCATCAGAAATCTCGTAG 3216 45.43 MNPSSVSQKSGKKSLATPALRSRIHRKRKQQLCLRNPSRLHDLNAISAPTRSIEAPKSFFRLQSSLFSLLNSEVRTEALIVIFVAVRSEVSRFRDFPSSFVFKQSSGGLDLGFREWITGAGGLSLSPGSNSLVWEWIIGGLNLGVGYQRLRSVSVCNMTIVTNVRQHKTGEVLNYASPNVSHPSNPARQYHDKSHFPIKTEQLSTQTHAVTCFSNHGSTTINGASTPFTAAALVAAFINQPRPSRLFLALLLAPPAVAGKRECRTGSELRVLGMDSSDVSVKGNCENGRGECFSAGFKEHSDVKIGKDGQKGYSASPKELWHACAGPLVTVPRENERVFYFPQGHIEQVEASTNQVADQQMPVYDLPHKILCRVANVVLKAEPDTDEVFAHVTLLPEQNQDENAVEKESPPPPSSRFHVQSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVTKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRISPSEFIVPYEQYMESMKKTYSIGLLAIVFFRLSIIDSIRRKMLKFTGTVVGIEDSDPKRWTDSKWRCLKVRWDETSTIPRPDRVSPWKIEPALTPPALNPMPVPRPKRPRSNMVPTSSESSVLTREGSSRVDPPASGFSRVLQGQDFSILRDNIMESNECETAEKSVVWPPSLDDEKSDMASASRRFRAENWVPSGSSEPTYTDLLSGFGTNGEYSHGVSTTFGDPTMVRTTNSVRKHALGQDGKSTNLGNPWPIRSSGLSLTLADSNQKGSVCAGDISYQARMNDRYGSLLNNHSILQGQKFENSPSCWLMPPPLQSNLDNSVISREQRGKSILAQKQETLKPKDGNCKIFGISLIRNPVTPGPVVSNREIINEPVIQMHQIPLDHTCEQKSEEMKCAASAGNQLAANEPDKQPQTGGIHVKDVQSKGQSGSSRSCTKVHKQGIALGRSVDLSKFNNYDELITDLDQLFEFGGELAAPIKNWLIVYTDDEGDMMLVGDDPWHEFCGMVRKIFIYTREEVQRMNPGSLTMKAEESEVEVEVDVEDSKEAKCQPLSSSEIS 1071
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6964416 6972953 - BLOR07538 Blo16g00290 71481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00290 1071 ProSiteProfiles B3 DNA-binding domain profile. 422 524 IPR003340 GO:0003677
Blo16g00290 1071 PANTHER AUXIN RESPONSE FACTOR 2 510 1053 - -
Blo16g00290 1071 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 510 1053 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo16g00290 1071 Pfam B3 DNA binding domain 422 516 IPR003340 GO:0003677
Blo16g00290 1071 SUPERFAMILY CAD & PB1 domains 945 1023 - -
Blo16g00290 1071 Pfam AUX/IAA family 993 1030 IPR033389 -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 397 416 - -
Blo16g00290 1071 SMART B3_2 422 521 IPR003340 GO:0003677
Blo16g00290 1071 Gene3D - 942 1035 - -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 600 649 - -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 1 20 - -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 1 15 - -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 931 948 - -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 1042 1071 - -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 604 620 - -
Blo16g00290 1071 CDD B3_DNA 421 518 IPR003340 GO:0003677
Blo16g00290 1071 ProSiteProfiles PB1 domain profile. 946 1030 IPR000270 GO:0005515
Blo16g00290 1071 SUPERFAMILY DNA-binding pseudobarrel domain 419 516 IPR015300 -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 921 948 - -
Blo16g00290 1071 Gene3D - 541 605 - -
Blo16g00290 1071 Gene3D - 419 522 IPR015300 -
Blo16g00290 1071 MobiDBLite consensus disorder prediction 622 638 - -
Blo16g00290 1071 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 306 510 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo16g00290 1071 PANTHER AUXIN RESPONSE FACTOR 2 306 510 - -
Blo16g00290 1071 Pfam Auxin response factor 510 580 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01322 Blo-Chr4:29048279 Blo16g00290 Blo-Chr16:6964416 4.01E-19 dispersed
Blo06g00975 Blo-Chr6:33043786 Blo16g00290 Blo-Chr16:6964416 3.32E-37 dispersed
Blo16g00290 Blo-Chr16:6964416 Blo08g00438 Blo-Chr8:8805932 2.08E-16 dispersed
Blo16g00290 Blo-Chr16:6964416 Blo16g00853 Blo-Chr16:35921520 8.81E-17 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13389 PF02362 B3 3.40E-19 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00290 - - vvi:100268072 959.133