Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00314 ATGGCTTTGGTTCAGGTACAAGAGACGCCTAGATGGAAGAAGCTCTTGAGTTACGTAGGCCCTGGTTTGCTTGTCTCTGTTGCTTATCTCGATCCTGGAAACTTGGAGACTGATTTGCAGGCAGGAGCAGATCACAAATACGAGCTGCTGTGGATCGTACTTCTGGGGCTTATCTTCGCTCTCATAATCCAATCTCGTTCAGTAAATCTAGGCGTTGCTACAGGGAAGCATCTGGCGGAGCACTGCAAACTCGAATATCCAGCACCAGTGAAATACTGTTTATGGGTGCTCGCAGAATTTGCTGTCATAGCAGCTGACATTCCTGAAGTAATCGGAACAGCTTTCGCTCTAAACATTCTCCTCCATATACCAATATGGGGTGGGGTTCTACTGGCTGGATTAAACACCCTCCTTCTGCTTGGTCTTCAACGATATGGAATTAGGAAGCTGGAGGTTGTAATTGGGAGTCTAATAGTGGTAGTCGGAAGCTGCTTCTTTAGCGTGGTGGTAAGTACTAGACCAAGGCTGGAGGACATGATGAGCGGAATGTTCATCCCGAAGTTGAACGGAAGCAATGCCGCCAAAGATGCGGTCGCTCTTCTAGGCGCTCTCATCATGCCCCACAATCTTTTCCTTCACTCAGGGTTGGTCATCTCCAGGAAATTCCCCCATTCTTCTCAAGCCATCAGGAGTGCGAGCAAATACTTCTTGATCGAAAGTGGTGTTTCACTGCTTCTCGCATTCGCTATCAACATGGCCGTGATTTCAGTAACTGCCAGCGTCTGCTCTGACCCGACGATCTCCTCCGATACCAATAATCATTGCAAAGATGTTACTCTCGAATCTGCATCCTACCTCCTTAAGAATGCTCTCGGAAACTGGAGTTCAAAATTATATGCCATATCGTTGCTCGCATCTGGCCAGAGTTCGGTCGTAACCGGAACATACGCGGGTCAATTCATCATGCAGGGTTTTCTAGATTTGAAGATGAAACTCTGGTTGAGAAACTTGCTTACCAGAGTAGCTGCAGTGGCTCCAAGCCTGATCCTAAGCATCATCGCTGGACCGCAAGGCGCTGCACAGCTAATTATTATCGCTTCTATGGTTCTATCATTTGAGCTGCCATTTGCCCTGGTTCCTCTCCTCAAGTTCACAAACAGTGAAGCAAAGATGGGTCAACACAAGAACTCTCTAATGGTGACAATTATCTCGTGGGTCTTGGGATTTTTGACGACAGCAATCAACTTGTACTTCTTAAGCACCACTGTGATTGGTCTGATGCTGAGGAATCGGCTACCGAAAGCTCTGCTGATTCTCACAGAAGTAGTGGTTTTTCCTCTAATGATACTTTATATTGCCTTGCTCCTATACTTGACCATCAAGAAAGTGTCACCAATAGCTGATTCCACAGAATTGGAAAATTATGCGAGCAGTTCAGACCAAACAATGCCCCCAGCCGAGAGGGTCGCAGCCGAGTCTAACGCCCGGCAACCCAATGAAATTGAGATGGGAGAAAGTGACATTGTCCTGGCCTAA 1536 47.07 MALVQVQETPRWKKLLSYVGPGLLVSVAYLDPGNLETDLQAGADHKYELLWIVLLGLIFALIIQSRSVNLGVATGKHLAEHCKLEYPAPVKYCLWVLAEFAVIAADIPEVIGTAFALNILLHIPIWGGVLLAGLNTLLLLGLQRYGIRKLEVVIGSLIVVVGSCFFSVVVSTRPRLEDMMSGMFIPKLNGSNAAKDAVALLGALIMPHNLFLHSGLVISRKFPHSSQAIRSASKYFLIESGVSLLLAFAINMAVISVTASVCSDPTISSDTNNHCKDVTLESASYLLKNALGNWSSKLYAISLLASGQSSVVTGTYAGQFIMQGFLDLKMKLWLRNLLTRVAAVAPSLILSIIAGPQGAAQLIIIASMVLSFELPFALVPLLKFTNSEAKMGQHKNSLMVTIISWVLGFLTTAINLYFLSTTVIGLMLRNRLPKALLILTEVVVFPLMILYIALLLYLTIKKVSPIADSTELENYASSSDQTMPPAERVAAESNARQPNEIEMGESDIVLA 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7964685 7967669 + BLOR07562 Blo16g00314 71505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00314 511 MobiDBLite consensus disorder prediction 475 511 - -
Blo16g00314 511 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 13 389 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 Hamap Divalent metal cation transporter MntH [mntH]. 1 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 Pfam Natural resistance-associated macrophage protein 36 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 PRINTS Natural resistance-associated macrophage protein signature 94 120 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 PRINTS Natural resistance-associated macrophage protein signature 147 168 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 PRINTS Natural resistance-associated macrophage protein signature 197 220 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 PRINTS Natural resistance-associated macrophage protein signature 122 141 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 PRINTS Natural resistance-associated macrophage protein signature 335 352 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo16g00314 511 PANTHER METAL TRANSPORTER NRAMP5-LIKE 4 509 - -
Blo16g00314 511 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 4 509 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00159 Blo-Chr5:1436798 Blo16g00314 Blo-Chr16:7964685 2.44E-175 dispersed
Blo12g00978 Blo-Chr12:27826943 Blo16g00314 Blo-Chr16:7964685 2.56E-97 dispersed
Blo16g00314 Blo-Chr16:7964685 Blo16g00367 Blo-Chr16:12116155 1.14E-41 dispersed
Blo16g00314 Blo-Chr16:7964685 Blo06g00647 Blo-Chr6:29455010 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00314 K21398 - vvi:100262929 676.396