Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00325 ATGGAAGGAGGGTTTAACACGCATGAAATAGCAGTAGAAGTAGTGGGAGAGAAGTTTGGAGAATCATTATCTTCAACTAGAAACTGTTCTTACCAGACCCTAACCCAGATTAGAACCAAGAGAGGTTCATCCTCGGAAACTTCTCAGACCAGCTTCGAGAAACCAGCTAAAATGGCCAAGACTAATGATTGGAACTCTTGCATCGCTCACCATGTTCCACCAAAACCTTCTTCTTCGTCTTCCTCTCAGTTTCTTTCTTTCGTTGATTCCAATTTGCAGAGAGTTTCCATACCAAAGGAGTGTTCGTTCTCTCAGAGAAACATTCAACTTCCACCATTACTTTCGAAGGAGATGAACCAAAGCAATGCTCCATTAAAAGGGACTAAGAGAAATTCATCGACCAATAGAACATCAAATCCTAATGATCATATAATAGCCGAGAGAAAACGAAGAGAAAAGCTTAGCCAGAGGTTCATAGCTCTTTCCGCCATAGTTCCCGGTCTCAAAAAGATGGACAAAGCTTCTGTTCTTGGAGATGCTATAAAGTACATAAAACAACTTCATGAACGCGTGCAATTACTAGAGGAACAGACGAAGAAGAAGACTGTTGAGTCGGTGGTGTTCATAAAAAAGTCTCAGATTTGCCTGGAAGACGACAGTTCTTCATGCGATGAGAACTTCGATGGCGGCTCTGACGAGGCGCTTCTGCCGGAAATTGAAGCTAGAGTTTCGGAAAAGAGTGTTTTGCTTAGAATCCACTGTGAAAAACACAAAGGTTTTGTGCCGAAAATAATAAGCGAAATAGAAAAACTGCATCTTTCTATCGTCCACAGTAGTGTCTTACCTTTTGGAAGTTCTACCCTGGACATTACTGTTATTGCGGAGATGGAGGATGAATTCAAGATGACAGTGAAAGATCTAGTAAGAAACATAAGAATGGCTCTAGTAAAGTTTGCTTAG 960 41.15 MEGGFNTHEIAVEVVGEKFGESLSSTRNCSYQTLTQIRTKRGSSSETSQTSFEKPAKMAKTNDWNSCIAHHVPPKPSSSSSSQFLSFVDSNLQRVSIPKECSFSQRNIQLPPLLSKEMNQSNAPLKGTKRNSSTNRTSNPNDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYIKQLHERVQLLEEQTKKKTVESVVFIKKSQICLEDDSSSCDENFDGGSDEALLPEIEARVSEKSVLLRIHCEKHKGFVPKIISEIEKLHLSIVHSSVLPFGSSTLDITVIAEMEDEFKMTVKDLVRNIRMALVKFA 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8400805 8401958 + BLOR07573 Blo16g00325 71516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00325 319 MobiDBLite consensus disorder prediction 38 56 - -
Blo16g00325 319 Gene3D - 135 208 IPR036638 GO:0046983
Blo16g00325 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Blo16g00325 319 Pfam Helix-loop-helix DNA-binding domain 143 188 IPR011598 GO:0046983
Blo16g00325 319 PANTHER TRANSCRIPTION FACTOR BHLH18-LIKE 21 318 - -
Blo16g00325 319 SMART finulus 144 193 IPR011598 GO:0046983
Blo16g00325 319 MobiDBLite consensus disorder prediction 112 146 - -
Blo16g00325 319 PANTHER BHLH TRANSCRIPTION FACTOR 21 318 - -
Blo16g00325 319 MobiDBLite consensus disorder prediction 112 141 - -
Blo16g00325 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 201 IPR036638 GO:0046983
Blo16g00325 319 Coils Coil 184 204 - -
Blo16g00325 319 CDD bHLH_AtNAI1_like 138 212 - -
Blo16g00325 319 MobiDBLite consensus disorder prediction 38 57 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00723 Blo16g00325 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00042 Blo-Chr6:1061144 Blo16g00325 Blo-Chr16:8400805 2.03E-79 dispersed
Blo16g00325 Blo-Chr16:8400805 Blo02g00993 Blo-Chr2:38538853 8.76E-20 dispersed
Blo16g00325 Blo-Chr16:8400805 Blo05g00723 Blo-Chr5:25340011 5.77E-78 wgd
Blo16g00325 Blo-Chr16:8400805 Blo06g00041 Blo-Chr6:985921 1.00E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13395 PF00010 HLH 2.20E-10 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00325 - - pmum:103335635 339.732