Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00327 ATGCGTCTCCTGCCCTTCTTCTTCTTCTGCCTCGTCCTCCTCATTCTTGTTAACCTCTCTGTCTCTAACCAAGTCTCTGAACTGCGGGCTCTTCTCTCTTTCAAAACCTCCATCGTTTCCGATCCCAAGCTTTTCCTCTCACAGTGGAACGCTTCTGTTCCTCATTGTTCCTGGCCTGGTGTCACCTGCGATTCTCGGCGGCGGGTTGTCGGAATCGACCTCTCCGGCCTCGACCTCTATGGAACACTTTCGCCTGAAGTTTCTCACCTCCGTTTCCTCACCAACCTCTCCGTCGCCGCCAATCAATTTTACGGTTCTATTCCGCCGGAGATCTCTGTAATCGCTCCTCTCCGATACCTCAACCTCTCTAATAATGTTTTCAACGGTACATTTCCGTCGGAGCTTTCGCAACTTAAGAATCTGCTAGATTTGGACTTATACAATAACAATATGACCGGAGAGTTGCCACTTGTGGTTGTCGAAATGCCGGGGCTCCGCCATTTGCATCTGGGTGGGAATTTCTTCACCGGTTGGATTCCGCCGGAGTATGGCCGCTGGGAGTTTTTGGAGTACTTAGCTGTTTCCGGCAATGAGCTTGAAGGTCCTATACCATCACAACTAGGTAACTTGACAAAACTCCGCGAGCTCTACATTGGCTACTATAATAACTTCGACAGTGGTATACCCGCCGAAATCGGGAACCTGTCGGAGCTACTCCGGTTTGATGCTGCAAATTGCGGATTAACCGGTGAGATTCCGCCAGAGCTTGGTAAGCTCCAGAAGCTAGATACTCTGTTTCTACAGGTAAATGCGTTGGGTGGGTCTTTGCCATCTGAGATTGGGAGATTAAAGAGCTTGAAATCTTTGGATTTATCGAACAACTTGCTCGCCGGTGAGATTCCAGATTCTTTTGCTGAGCTCAAGAACTTGACCCTCTTGAATCTTTTCCGAAACAAGCTTCTCGGAGCTATTCCGGAGTTCATCGCCGATTTGCCCAAGCTAGAGGTCTTGCAGTTATGGGAAAACAACTTCACTGGTTCTATTCCTCAAAGCCTGGGGAAGAACGAGAAGCTACTGCTTCTTGACCTTTCTTCCAACAAGTTAACCGGAACTCTCCCTCCGGGTTTGTGCGCCGGCTATCGGCTGCAGACTTTAATTACTTTAGAGAACTTTTTGTTGGGTCCTATTCCGGAATCGCTAGGTGAATGTGAATCTCTCAATCGTATTCGTATGGGGGGGAATTTTTTAAATGGCTCCATTCCAAAGGGGCTCTTCAGCTTGCCGGAACTTACTCAGGTCGAGCTGCAGGACAATCTCCTTTCCGGTGAGTTCCCGGCAACTGATTCTTCCTCTATAAGTCTTGGTCAAATTAGTCTCTCAAACAATCAGCTTTCTGGGTCACTGCCCCAGACGATCGGCAACTTCTCCGGCGTTCAGAAACTTCTTCTCGATGGCAACAAGTTCTCAGGCAAAATTCCACCGGAAATTGGGAAGTTACAGCAGCTTTCTAAGATAGACTTTAGTGGTAACGATCTCTCTGGTCGGATCACAGCAGAAATCAGCCTATGCAAGCTCTTGACCTTCGTTGATCTCAGTAGAAACCAGCTTTCTGGTGAGATCCCAAATGAAATTACCAGTATGAGAATATTAAATTACCTCAATCTTTCAAGAAATCATTTAGTGGGTAGCATTCCTTCTTCAATCGCTAGTATGTTAAGCTTGACATCAGTAGATTTTTCATATAACAATCTTTCTGGTTTTGTTCCGGGTACTGGCCAATTCAGCTACTTCAATTACACTTCTTTTCTGGGTAACTCTGGCCTTTGCGGCCCGTACTTAGGACCATGCAAAGACGGGATTTCCAGTCCGAACCACCAAGGCCACTCGAAGAGCTCATTCTCTGCTTCACTGAAGCTCATTCTGGTTATTGGATTGCTTGTTTGCTCCATTGCATTTGCCATTGCAGCCATCCTCAAAGCTCGTTCTTTGAAGAGAGAGAGCGATTCCCGAGCCTGGAAATTGACTGCATTTCAACGATTAGATTTTGCAGTAGATGAAGTTTTGGATTGCTTGAAAGAAGACAACATTATCGGAAAAGGGGGAGCTGGAATTGTCTATAAAGGGATTATGCCTAACAGCGATATAGTGGCCGTGAAGAGACTTCCAGCTATGAGCCGAGGGGCCCCACACGACCACGGATTCAACGCTGAAATTCAAACTCTCGGACGGATTAAGCATCGTCACATTGTTCGATTGCTGGGTTTTTGTGCAAATCGCGAAACGAATCTTCTCATTTATGAGTACATGCCTAATGGGAGCTTAGGTGAAGTTCTTCATGGCAAGAAAGGTGAGCATTTGCTGTGGGAGATAAGGTATAAGATTGCTATAGAGGCAGCCAAAGGTCTTTGCTATTTGCATCACGATTGTTCGCCATTGATCGTTCATCGAGACGTGAAATCAAACAACATTTTGTTGGACTTCAACTTTGAAGCACATGTTGCTGATTTCGGACTCGCCAAGTTCTTGCAGGATTCAGGGACGTCCGAATGTATGTCTGCCATTGCCGGCTCTTACGGATACATAGCCCCAGAATATGCATACACGCTAAAGGTGGACGAAAAGAGTGACGTATACAGCTATGGAGTAGTCCTTCTTGAACTCGTTTGCGGGAGAAAACCGGTTGGAGAATTCGGAGACGGAGTCGACATCGTCCAGTGGGTTCGTAGAATGACAGGCTCAAACAAGGAAGGAGTCCTTAAAGTTCTAGATCCAAGACTCTCTTCAGTGCCTCTCAACGAGGCAATGCATGTATTCTACGTAGCAATGCTTTGCGTTGAAGAACAGGCGGTAGGGCGCCCCACAATGCGAGAAGTGGTTCAAATTCTCTCAGATCTTCCAAAGCCGGCAGACCCAAAACTGCAGGGCGACTCTACAATTCCAGGGTCATCGCCCCAACCGGCCATTGAGGCTCATCCAAAGACAACTACTGATCTTCTTAGCATTTGA 3006 46.91 MRLLPFFFFCLVLLILVNLSVSNQVSELRALLSFKTSIVSDPKLFLSQWNASVPHCSWPGVTCDSRRRVVGIDLSGLDLYGTLSPEVSHLRFLTNLSVAANQFYGSIPPEISVIAPLRYLNLSNNVFNGTFPSELSQLKNLLDLDLYNNNMTGELPLVVVEMPGLRHLHLGGNFFTGWIPPEYGRWEFLEYLAVSGNELEGPIPSQLGNLTKLRELYIGYYNNFDSGIPAEIGNLSELLRFDAANCGLTGEIPPELGKLQKLDTLFLQVNALGGSLPSEIGRLKSLKSLDLSNNLLAGEIPDSFAELKNLTLLNLFRNKLLGAIPEFIADLPKLEVLQLWENNFTGSIPQSLGKNEKLLLLDLSSNKLTGTLPPGLCAGYRLQTLITLENFLLGPIPESLGECESLNRIRMGGNFLNGSIPKGLFSLPELTQVELQDNLLSGEFPATDSSSISLGQISLSNNQLSGSLPQTIGNFSGVQKLLLDGNKFSGKIPPEIGKLQQLSKIDFSGNDLSGRITAEISLCKLLTFVDLSRNQLSGEIPNEITSMRILNYLNLSRNHLVGSIPSSIASMLSLTSVDFSYNNLSGFVPGTGQFSYFNYTSFLGNSGLCGPYLGPCKDGISSPNHQGHSKSSFSASLKLILVIGLLVCSIAFAIAAILKARSLKRESDSRAWKLTAFQRLDFAVDEVLDCLKEDNIIGKGGAGIVYKGIMPNSDIVAVKRLPAMSRGAPHDHGFNAEIQTLGRIKHRHIVRLLGFCANRETNLLIYEYMPNGSLGEVLHGKKGEHLLWEIRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDFNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSYGVVLLELVCGRKPVGEFGDGVDIVQWVRRMTGSNKEGVLKVLDPRLSSVPLNEAMHVFYVAMLCVEEQAVGRPTMREVVQILSDLPKPADPKLQGDSTIPGSSPQPAIEAHPKTTTDLLSI 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8475280 8478460 + BLOR07575 Blo16g00327 71518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00327 1001 MobiDBLite consensus disorder prediction 976 1001 - -
Blo16g00327 1001 PANTHER UNNAMED PRODUCT 2 982 - -
Blo16g00327 1001 MobiDBLite consensus disorder prediction 966 1001 - -
Blo16g00327 1001 SUPERFAMILY L domain-like 357 616 - -
Blo16g00327 1001 Pfam Leucine rich repeat 261 320 IPR001611 GO:0005515
Blo16g00327 1001 SUPERFAMILY RNI-like 72 417 - -
Blo16g00327 1001 SMART serkin_6 691 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00327 1001 Gene3D Ribonuclease Inhibitor 189 326 IPR032675 -
Blo16g00327 1001 ProSiteProfiles Protein kinase domain profile. 691 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00327 1001 PANTHER - 2 982 - -
Blo16g00327 1001 Pfam Protein kinase domain 693 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00327 1001 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Blo16g00327 1001 Gene3D Phosphorylase Kinase; domain 1 659 768 - -
Blo16g00327 1001 Gene3D Transferase(Phosphotransferase) domain 1 769 975 - -
Blo16g00327 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Blo16g00327 1001 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Blo16g00327 1001 Gene3D Ribonuclease Inhibitor 327 622 IPR032675 -
Blo16g00327 1001 SMART LRR_typ_2 356 379 IPR003591 -
Blo16g00327 1001 SMART LRR_typ_2 283 306 IPR003591 -
Blo16g00327 1001 SMART LRR_typ_2 571 594 IPR003591 -
Blo16g00327 1001 SMART LRR_typ_2 331 355 IPR003591 -
Blo16g00327 1001 SUPERFAMILY Protein kinase-like (PK-like) 685 962 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01779 Blo-Chr1:57505901 Blo16g00327 Blo-Chr16:8475280 1.69E-144 dispersed
Blo06g00039 Blo-Chr6:930208 Blo16g00327 Blo-Chr16:8475280 0 dispersed
Blo07g01131 Blo-Chr7:31179054 Blo16g00327 Blo-Chr16:8475280 1.61E-14 dispersed
Blo09g00159 Blo-Chr9:4964916 Blo16g00327 Blo-Chr16:8475280 0 dispersed
Blo10g00283 Blo-Chr10:4085756 Blo16g00327 Blo-Chr16:8475280 0 dispersed
Blo11g01018 Blo-Chr11:26493819 Blo16g00327 Blo-Chr16:8475280 0 dispersed
Blo12g00880 Blo-Chr12:27009320 Blo16g00327 Blo-Chr16:8475280 0 dispersed
Blo18g00170 Blo-Chr18:1634765 Blo16g00327 Blo-Chr16:8475280 0 dispersed
Blo07g01093 Blo-Chr7:30781900 Blo16g00327 Blo-Chr16:8475280 3.98E-12 transposed
Blo09g00230 Blo-Chr9:10442710 Blo16g00327 Blo-Chr16:8475280 3.84E-37 transposed
Blo16g00327 Blo-Chr16:8475280 Blo05g00722 Blo-Chr5:25244562 0 wgd
Blo16g00327 Blo-Chr16:8475280 Blo06g00036 Blo-Chr6:728171 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84739 PF00069 Pkinase 4.90E-44 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00327 - - mnt:21399160 1529.23