Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00334 ATGCTCCTGGACGGAGCATCACCGTCACCTGCCAACGACAGCTCCGGGTCAGCTCACCCCTGTCGTCGGCTGAAGGAATGCTCGGAATGCCTGTGTCCCCATCCAAGTCCCAACTCGCGAAGTATTAACTTCGAGGATGGTTCCATTTGGGATGTTGTCCCAAAGGATAGGGAGCAGCCCATGCATGTCTTGACTTGGGACACACCTTCGTTTCCAAATGCACAAAGCTTATGTGTCAAAACTGTCAACATCGACTCTACTTTCAATCCCCAGTTAACTGATTTCAAATTGCTCCTCAATGTCATTTGTTTTGGAAAGTTTGGGGAGAGTATAAATATCCCTGCTCTCACTCTCTCGCTTACTCTCTCTCTCCGCAATCACCTCTTGATTCCTACAGATTCTGTGTTTTTTCGTTTCTCTTTGCGCCGCCTTCCATGGACTGGGTTCGTGGTCGCGAACTGGGTTCCGGTGCTTTTGCGACGGTCTCTTTGGCAGCCAAGAGGGATGATTCCGATCTCTTTCCCCCCTTTGATGGCCGTTAAATCTTCTCAATTCTCCTTCTCTCAATCGCTCAGGCACGAGAGAGAAGTTCTGCGCCAACTCGATTCTTGCTCGGAGATCATTGGCTGTTTCGGCGACGATATCACCGTCGAAAAGGGCGAGAAGCTGTACAACCTCGTTTTGGAGTACGCATCCGGAGGCAGTCTGGTGGATCAACTGGACAAGTACGGTGGTCGTTTGCCAGAATCATTAGTTCGGCGATACACCAGATCAATATTGAAAGGGCTTAATATTTTGGTGGTCGACAATGGCGATGTTAAGATTGCCGATTTTGGGCTGGCGAAGATGGCCGGGGAAGAAATATCAACGGAGGAAGGAAACTTTGAGTTGAGGGGAACGCCTCTGTCTATTGCGCCAGAATCCGTCACCGACAATGAGTACGAGGCGCCGTGCGACATTTGGGCTCTCGCCTGTGCCGTCGTGGAAATGTTCACCTTAAAACCAGCCCGGAATTTCAGCAAGAAGAACATCTGTGCGGTAATCATGCGAATAGGCGTCGGAAAGGAGTTGCCAGTTATTCCGACAGATTTATCCGACGAGGGGATAGATTTTCTGGAGAAATCTTTTGTAAAGGATCCTACTAAAAGATGGAGCGCTCAAATGCTACTGAATCATCCATTTGTGGCGGATGATCCTGTTCCATCGAAGCAACCTGTGGAGTCATCGCCGTCCCCAAGATCTCCCTTGTAA 1251 49.56 MLLDGASPSPANDSSGSAHPCRRLKECSECLCPHPSPNSRSINFEDGSIWDVVPKDREQPMHVLTWDTPSFPNAQSLCVKTVNIDSTFNPQLTDFKLLLNVICFGKFGESINIPALTLSLTLSLRNHLLIPTDSVFFRFSLRRLPWTGFVVANWVPVLLRRSLWQPRGMIPISFPPLMAVKSSQFSFSQSLRHEREVLRQLDSCSEIIGCFGDDITVEKGEKLYNLVLEYASGGSLVDQLDKYGGRLPESLVRRYTRSILKGLNILVVDNGDVKIADFGLAKMAGEEISTEEGNFELRGTPLSIAPESVTDNEYEAPCDIWALACAVVEMFTLKPARNFSKKNICAVIMRIGVGKELPVIPTDLSDEGIDFLEKSFVKDPTKRWSAQMLLNHPFVADDPVPSKQPVESSPSPRSPL 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9390626 9396228 - BLOR07582 Blo16g00334 71525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00334 416 Pfam Protein kinase domain 187 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00334 416 ProSiteProfiles Protein kinase domain profile. 96 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00334 416 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 173 413 - -
Blo16g00334 416 SUPERFAMILY Protein kinase-like (PK-like) 177 412 IPR011009 -
Blo16g00334 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 173 413 - -
Blo16g00334 416 MobiDBLite consensus disorder prediction 396 416 - -
Blo16g00334 416 Gene3D Transferase(Phosphotransferase) domain 1 177 413 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00334 Blo-Chr16:9390626 Blo17g00427 Blo-Chr17:5089468 9.80E-151 dispersed
Blo16g00334 Blo-Chr16:9390626 Blo04g00660 Blo-Chr4:5797884 1.54E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84740 PF00069 Pkinase 1.80E-27 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00334 - - zju:107424505 281.567