Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00357 ATGAGTTGCAACGGGTGCAGAGTTCTCAGAAAAGGGTGCAGCGAGTCTTGTTTTCTGCGGCCATGTTTGCAGTGGATTGAAAGTCCTGAAGCTCAAGCCCACGCCACCATTTTTGTTGCTAAGTTCTTTGGCCGAGCTGGTCTCATGTCCTTCATCTCTGCCGTACCTGAATCTCAGAGACCCTCGTTGTTTCAGTCACTGCTATTCGAAGCGTGTGGGCGGACGGTGAATCCTGTCAACGGCGCCGTCGGGCTTCTCTGGACGGGAAACTGGCATATGTGCCAGGCGGCGGTGGAGACTGTGCTTCGGGGAGGGACTTTGAGGCCTTTTCCGGAGGTTTTCGCCGGAGGATCGCTTGGTTCCCCTTCGGATGAGGCGTCCAATATGGATTGTACGGACATATGGAAGCTCCGAGATCCGAAATTTAGTTCACGGCTCTCGAATTCCAGAAACAGAATCTCCCCTAACTGCAGGCGATTGGAGGGATTAACGAAGCCGCAGCGGCCTCTCACCGATCTCGATCCCCGCCAGACGCCCATTGTTCAGGCCAAATTGTTGGAGAAACGAAGGCCAGGAAGTCCGTCGATGAACTCGGAGGAATCTGTGACGACAACATGCTTCCAAAGCAGTGTGGTGCGCGACCAGTACACAAATGGAGGAACGAGAAAGCTTCTCAACTTATTCATATAA 690 53.19 MSCNGCRVLRKGCSESCFLRPCLQWIESPEAQAHATIFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQAAVETVLRGGTLRPFPEVFAGGSLGSPSDEASNMDCTDIWKLRDPKFSSRLSNSRNRISPNCRRLEGLTKPQRPLTDLDPRQTPIVQAKLLEKRRPGSPSMNSEESVTTTCFQSSVVRDQYTNGGTRKLLNLFI 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 10667141 10667940 + BLOR07605 Blo16g00357 71548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00357 229 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Blo16g00357 229 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Blo16g00357 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 229 - -
Blo16g00357 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00357 Blo-Chr16:10667141 Blo03g01204 Blo-Chr3:38313917 8.49E-09 dispersed
Blo16g01064 Blo-Chr16:39175828 Blo16g00357 Blo-Chr16:10667141 2.20E-41 transposed
Blo18g00717 Blo-Chr18:17618546 Blo16g00357 Blo-Chr16:10667141 8.30E-55 transposed
Blo16g00357 Blo-Chr16:10667141 Blo06g00008 Blo-Chr6:221401 1.42E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13399 PF03195 LOB 9.50E-26 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00357 - - rcu:8283348 323.168