Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo16g00357 | ATGAGTTGCAACGGGTGCAGAGTTCTCAGAAAAGGGTGCAGCGAGTCTTGTTTTCTGCGGCCATGTTTGCAGTGGATTGAAAGTCCTGAAGCTCAAGCCCACGCCACCATTTTTGTTGCTAAGTTCTTTGGCCGAGCTGGTCTCATGTCCTTCATCTCTGCCGTACCTGAATCTCAGAGACCCTCGTTGTTTCAGTCACTGCTATTCGAAGCGTGTGGGCGGACGGTGAATCCTGTCAACGGCGCCGTCGGGCTTCTCTGGACGGGAAACTGGCATATGTGCCAGGCGGCGGTGGAGACTGTGCTTCGGGGAGGGACTTTGAGGCCTTTTCCGGAGGTTTTCGCCGGAGGATCGCTTGGTTCCCCTTCGGATGAGGCGTCCAATATGGATTGTACGGACATATGGAAGCTCCGAGATCCGAAATTTAGTTCACGGCTCTCGAATTCCAGAAACAGAATCTCCCCTAACTGCAGGCGATTGGAGGGATTAACGAAGCCGCAGCGGCCTCTCACCGATCTCGATCCCCGCCAGACGCCCATTGTTCAGGCCAAATTGTTGGAGAAACGAAGGCCAGGAAGTCCGTCGATGAACTCGGAGGAATCTGTGACGACAACATGCTTCCAAAGCAGTGTGGTGCGCGACCAGTACACAAATGGAGGAACGAGAAAGCTTCTCAACTTATTCATATAA | 690 | 53.19 | MSCNGCRVLRKGCSESCFLRPCLQWIESPEAQAHATIFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQAAVETVLRGGTLRPFPEVFAGGSLGSPSDEASNMDCTDIWKLRDPKFSSRLSNSRNRISPNCRRLEGLTKPQRPLTDLDPRQTPIVQAKLLEKRRPGSPSMNSEESVTTTCFQSSVVRDQYTNGGTRKLLNLFI | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 10667141 | 10667940 | + | BLOR07605 | Blo16g00357 | 71548 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo16g00357 | 229 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 101 | IPR004883 | - | |
Blo16g00357 | 229 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Blo16g00357 | 229 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN | 1 | 229 | - | - | |
Blo16g00357 | 229 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 229 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo16g00357 | Blo-Chr16:10667141 | Blo03g01204 | Blo-Chr3:38313917 | 8.49E-09 | dispersed | |
Blo16g01064 | Blo-Chr16:39175828 | Blo16g00357 | Blo-Chr16:10667141 | 2.20E-41 | transposed | |
Blo18g00717 | Blo-Chr18:17618546 | Blo16g00357 | Blo-Chr16:10667141 | 8.30E-55 | transposed | |
Blo16g00357 | Blo-Chr16:10667141 | Blo06g00008 | Blo-Chr6:221401 | 1.42E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13399 | PF03195 | LOB | 9.50E-26 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo16g00357 | - | - | rcu:8283348 | 323.168 |