Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00358 ATGCAATTCTCTGAAACCCCACCGCCACCGTTGCACCAAATCAGCCCACCACCAAATTCCGCCATGAGAAAAAACCAAATTCAAAGAGCTCGGCCATGGCCGGGATTTCCCACATCCAAGGCATTGGGAAACTTCGGGGACACCAACTGCATGGAAGAATTGCTAGTCCACTGCGCCAACGCCATTGAAAGCAACGATGCCACTCTCGCCCAACAGATCCTTTGGGTCCTAAACAACATAGCCCCTCCCGACGGCGACTCAAATCAGAGGCTCACTTCCGGCTTCCTCCGAGCTCTCATTTTGCGCGCAGCCAATAGCGGAAGCTGCAAAATGCTTGCAGCTATGGTGAACGCTCGCGACAATCTGGCTATCGACACCCACAAATTCTCTGTCATTGAGCTCGCTAGCTTTGTAGACCTGACACCTTGGTATAGATTCGGCTTCACTGCAGCCAATGCAGCTATTATAGACGCCGTTGAAGGGTTCTCTTGCATCCATATTGTGCATTTAAGCTCAACTCATTGCATGCAAATCCCGACGCTTATCGACGCCATTGCTAGTCGTTACGAGGTTCCGCCATTGATAAAGCTCACAGTTGTTTCAGGTGCGACAGAAGATATACCCCCTGTACTTGACCTTTCTTTCGACGAATTGGGTTCAAAGCTGGTGAATTTCGCAAGGTATAGAAACGTAGCGATGGAATTTAGAGTGGTTCCTTCCAATTACACTGATGGATTTGCTAACTTGATCGAACAACTTCGATTGCAAAATTTAGTTTACTCAGAAAGTGGCGAGGCTTTAGTTATAAATTGTCACATGATGCTCCATCATATTCCAGAACAAACCCTTTCTCCAAATCAAAACATAAATCCAAATGCATTATCTTTTGAATCTTCCTCCTCGCTTCGGACAATGTTTTTGAAAGCCATTCGAAGCCTAGAGCCTACGATTGTAGTCTTAATTGATGAAGATGCCGATTTGACATCAAATAACTTAGTGAGCAGATTAAAAGCAGCCTTCAACTACTTATGGATTCCTTATGATACAGTAGATACGTTTCTTCCAAAAGGAAGCAAGCAAAGGCAGTGGTACGAAGCTGATGTTTGCTGGAAGATTGAGAATGTGATAGCCCAAGAGGGTCTTAAGAGAGTTGAGCGACTAGAACCGAAGAGCCGGTGGGTTCAGCGAATGATAAATGCAAATTTTCGAGGGGTTTCGTTTGGTGAAGATGGTGTTGCAGAGGTGAAGTTGATGCTTGATGGGCATTCAGCTGGGTGGGGATTGAAGAAGGAAGACGATGATCTTGTGCTCACATGGAAAGGGCATAATGTTGTTTTTGCAACTGCTTGGGTGCCTGCTTAA 1362 45.74 MQFSETPPPPLHQISPPPNSAMRKNQIQRARPWPGFPTSKALGNFGDTNCMEELLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTSGFLRALILRAANSGSCKMLAAMVNARDNLAIDTHKFSVIELASFVDLTPWYRFGFTAANAAIIDAVEGFSCIHIVHLSSTHCMQIPTLIDAIASRYEVPPLIKLTVVSGATEDIPPVLDLSFDELGSKLVNFARYRNVAMEFRVVPSNYTDGFANLIEQLRLQNLVYSESGEALVINCHMMLHHIPEQTLSPNQNINPNALSFESSSSLRTMFLKAIRSLEPTIVVLIDEDADLTSNNLVSRLKAAFNYLWIPYDTVDTFLPKGSKQRQWYEADVCWKIENVIAQEGLKRVERLEPKSRWVQRMINANFRGVSFGEDGVAEVKLMLDGHSAGWGLKKEDDDLVLTWKGHNVVFATAWVPA 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 10863690 10865051 + BLOR07606 Blo16g00358 71549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00358 453 ProSiteProfiles GRAS family profile. 42 451 IPR005202 -
Blo16g00358 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 451 IPR005202 -
Blo16g00358 453 MobiDBLite consensus disorder prediction 1 33 - -
Blo16g00358 453 Pfam GRAS domain family 52 450 IPR005202 -
Blo16g00358 453 PANTHER SCARECROW-LIKE PROTEIN 32 21 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00392 Blo-Chr13:23028490 Blo16g00358 Blo-Chr16:10863690 8.04E-134 dispersed
Blo16g00358 Blo-Chr16:10863690 Blo05g00836 Blo-Chr5:30235207 2.30E-45 dispersed
Blo16g00358 Blo-Chr16:10863690 Blo06g00014 Blo-Chr6:333103 1.26E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13400 PF03514 GRAS 2.30E-87 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00358 - - tcc:18611261 750.355