Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00393 ATGGACTGGGTTCGTGGTCGCGAACTGGGTTCCGGTGCTTTTGCGACGGTCTCTTTGGCAGCCAAGACGGATGATTCCGATCTCTTTCCCCTTTTGATGGCCGTTAAAAATTCTCAATTCTCCTTCTCTCAATCGCTCAGGCACGAGAGAGAAGTTCTGCGCCAACTCGATTCTTGCCCGGAGATCATTCGCTGTTTTGGCGACGATTGCACCTTAGAAAAAGGCTATAAGTTGTACAATCTGATTTTGGAGTTCGCCTCTGGAGGAAGTCTGGTGGATCAAGTGGACAAGTACGGCGGTCGTTTGCCCGAATCGTTAGTTCGACGATACACCAGAGCAATATTGAAAGTGATTGATTTCATTCACTCCAAAGGGTTCGTCCACTGCGACATAAAACTGGGGAATATTTTGGTGGTCGACAATGGGGATGTTAAGATGGCCGATTTTGGGCTAGCGAAGAGGGCCAGGGAAGAAATATCGACGGAAGAAGGAAACTTTGAGTTGAGGGGAACGCCTATGTCTATTGCGCCGGAATCCGGAACCGACAATGAGTACGAGGAGATAGAAAGTAGATGTTGA 579 48.36 MDWVRGRELGSGAFATVSLAAKTDDSDLFPLLMAVKNSQFSFSQSLRHEREVLRQLDSCPEIIRCFGDDCTLEKGYKLYNLILEFASGGSLVDQVDKYGGRLPESLVRRYTRAILKVIDFIHSKGFVHCDIKLGNILVVDNGDVKMADFGLAKRAREEISTEEGNFELRGTPMSIAPESGTDNEYEEIESRC 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 14088457 14089035 - BLOR07641 Blo16g00393 71584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00393 192 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Blo16g00393 192 Gene3D Transferase(Phosphotransferase) domain 1 2 190 - -
Blo16g00393 192 SMART serkin_6 3 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00393 192 MobiDBLite consensus disorder prediction 170 192 - -
Blo16g00393 192 Pfam Protein kinase domain 5 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00393 192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Blo16g00393 192 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 187 - -
Blo16g00393 192 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 187 - -
Blo16g00393 192 SUPERFAMILY Protein kinase-like (PK-like) 2 185 IPR011009 -
Blo16g00393 192 ProSiteProfiles Protein kinase domain profile. 3 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00393 Blo-Chr16:14088457 Blo17g00427 Blo-Chr17:5089468 3.50E-111 dispersed
Blo16g00393 Blo-Chr16:14088457 Blo16g00394 Blo-Chr16:14103581 5.82E-108 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84743 PF00069 Pkinase 2.60E-30 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00393 - - zju:107424505 219.164