Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00394 ATGGAGTGGATTCGTGGTCGCCAACTTGGTTTCGGTTCTTTTGCGACGGTCTCTTTGGCAGCGAGGAGAGACGATTCTGTTCTCTTTCCCCCTTTGATGGCCGTTAAATCTTTGCAATTCTTCTGCTCCCAATCGCTCAAGCACGAGAGAGAAGTTCTGGATCAACTGGGTTCTTGCCCGGAGATCATTCGATGTTTTGGCGACGATTGCACCGTCGAAAAGGGAGAGAAGTTATACAATCTCATTTTGGAGTACGCTTCCGGAGGCAGTCTGGTGGATCAACTGGGCAAATATGGCGGTCGTTTGCCGGAATCTTTAGTTCGGCGATACACCAGAACTATACTTAAAGGTCTTGATTTCATTCATTCGAAAGGGTTCGTCCACTGCGACATAAAGCTAGGGAATATTTTGATCTTCGACAATGGCGATGCTAAGATTGCGGATTTTGGGTTGGCGAAGAGGGCTAGGGAAGAAATATTAACGGAGAAAGGACAATTTGAGTTGAGGGGAACGCCTCTGTCTATTTCGCCGGAATCCGTCACCGACAACGTGTACGAGCCACCGTGCGACATTTGGGCTCTTGCCTGTGCCATAGTCGAGATGTTCACCGGAAAATCCGCCTGGAATTTCAGCGACAAATTGAACATCTGTGCAGTAATCATGCGAATTGGCGTCGGAGAGGAGTTGCCCGCTATTCCGACTGATTTATCCGAGGAGGGGAAAGATTTTCTGGAAAAGTGCTTTGTAAGGGATCCTACAAAAAGATGGAGTGCTCAAATGCTTCTGAGTCATCCATTTGTAGCGGATGATTCGGTTCCATGTAAGAAATGGACTGTTTCATCGCCGTCACCAAGGTCTCATTTCGAGTGGCCGGAGTGGCCTTCCTCCGAGTTGACAACTACTCTGACTTTGGACTGTTCCCATGCGTTAATGGAAAGCGCAACGAAATCTGATGGAAAATTTGAGGCTGAATTGAAATTGTGCGTGGCTTCTCCGGCGGACAGGCTCCGGCAGCTAGCGACGGCCGACGCACCATCTGATGGGTGGGATTCGGAGGGTTGGATCATCGTCAGGCGATGA 1080 49.17 MEWIRGRQLGFGSFATVSLAARRDDSVLFPPLMAVKSLQFFCSQSLKHEREVLDQLGSCPEIIRCFGDDCTVEKGEKLYNLILEYASGGSLVDQLGKYGGRLPESLVRRYTRTILKGLDFIHSKGFVHCDIKLGNILIFDNGDAKIADFGLAKRAREEILTEKGQFELRGTPLSISPESVTDNVYEPPCDIWALACAIVEMFTGKSAWNFSDKLNICAVIMRIGVGEELPAIPTDLSEEGKDFLEKCFVRDPTKRWSAQMLLSHPFVADDSVPCKKWTVSSPSPRSHFEWPEWPSSELTTTLTLDCSHALMESATKSDGKFEAELKLCVASPADRLRQLATADAPSDGWDSEGWIIVRR 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 14103581 14104660 + BLOR07642 Blo16g00394 71585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00394 359 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Blo16g00394 359 Pfam Protein kinase domain 5 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00394 359 Gene3D Transferase(Phosphotransferase) domain 1 92 303 - -
Blo16g00394 359 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00394 359 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Blo16g00394 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Blo16g00394 359 ProSiteProfiles Protein kinase domain profile. 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00394 359 CDD STKc_MAPKKK 2 267 - -
Blo16g00394 359 SUPERFAMILY Protein kinase-like (PK-like) 3 304 IPR011009 -
Blo16g00394 359 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 315 - -
Blo16g00394 359 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01310 Blo-Chr3:39450010 Blo16g00394 Blo-Chr16:14103581 7.36E-68 dispersed
Blo14g00010 Blo-Chr14:75884 Blo16g00394 Blo-Chr16:14103581 8.17E-62 dispersed
Blo15g00482 Blo-Chr15:7882572 Blo16g00394 Blo-Chr16:14103581 2.88E-64 dispersed
Blo16g00394 Blo-Chr16:14103581 Blo17g00427 Blo-Chr17:5089468 0 dispersed
Blo17g00146 Blo-Chr17:1352910 Blo16g00394 Blo-Chr16:14103581 2.52E-57 dispersed
Blo16g00393 Blo-Chr16:14088457 Blo16g00394 Blo-Chr16:14103581 5.82E-108 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84744 PF00069 Pkinase 7.80E-49 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00394 - - zju:107424505 397.127