Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00396 ATGGACTGGGTTCGTGGTCGCGAACTGGGTTCCGGTGCTTTTGCGACGGTCTCTTTGGCAGCCAAGAGGGATGATTCCGATCTCTTTCCCCCTTTGATGGCCCTTAAATCTTCTCAATTCTCCTTCTCTCAATCGCTCAGGCACGAGAGAGAAGTTCTACGCCAACTTGATTCTTTCCCGGAGATCATTCGCTGTTTCGGTGACGACGTCACCGTCGAAAGGGGGGAGAAGTTGTACAACCTTGTTTTGGAGTACGCATCCGGAGGCAGTCTGGTGGATCAACTGGACAGGTACGGCGGTCGTTTGCCAGAATCGTTAGTTCGGCGATACACCAGATCAATATTGAAAGGACTTGATTTCATTCACTCCAAAGGGTTCGTTCACTGCGACATAAAACTGGGGAATATTTTGGTGGTGGACAATGGCGATGTTAAGATTGCCGATTTTGGGCTGGCGAAGATGGCCGGGGAAGAAATATCAACGGAGGAAGGAAACTTTGAGTTGAGGGGAACGCCTCTGTCTATTGCGCCAGAATCCGTCACCGACAATGAGTACGAGGCACCGTGCGACATTTGGGCTCTCGCCTGTGCCGTCGTGGAGATGTTCACCGGAAAACCAGCCTGGAATTTCAGCAAGAAATTGAACATCTGTGCGGTAATCATGCGAATAGGCGTCGGAAAGGAGTTGCCCGTTATTCCGACAGATTTATCCGACGAGGGGAAAGATTTTCTGGGGAAATGTTTTGTAAAGGATCCTACTGAAAGATGGAGCGCTCAAATGCTACTGAATCATCCATTTGTGGCGGATGATCCTGTTCCATCGAAGCAACCGGTGGAGTCATCGCCGTCGCCAAGATCTCCCTTTGAAATGCCGCATTGGGGTTTCTCCTTGTCACGACCCACTCTTTACTCTTCCCATTCGTTTATGGAAATCGCAATGGAATCTGATGTGCAGTTCTAG 960 49.79 MDWVRGRELGSGAFATVSLAAKRDDSDLFPPLMALKSSQFSFSQSLRHEREVLRQLDSFPEIIRCFGDDVTVERGEKLYNLVLEYASGGSLVDQLDRYGGRLPESLVRRYTRSILKGLDFIHSKGFVHCDIKLGNILVVDNGDVKIADFGLAKMAGEEISTEEGNFELRGTPLSIAPESVTDNEYEAPCDIWALACAVVEMFTGKPAWNFSKKLNICAVIMRIGVGKELPVIPTDLSDEGKDFLGKCFVKDPTERWSAQMLLNHPFVADDPVPSKQPVESSPSPRSPFEMPHWGFSLSRPTLYSSHSFMEIAMESDVQF 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 14168693 14169652 + BLOR07644 Blo16g00396 71587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00396 319 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Blo16g00396 319 Gene3D Transferase(Phosphotransferase) domain 1 93 289 - -
Blo16g00396 319 SUPERFAMILY Protein kinase-like (PK-like) 2 307 IPR011009 -
Blo16g00396 319 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Blo16g00396 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Blo16g00396 319 Pfam Protein kinase domain 5 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00396 319 CDD STKc_MAPKKK 2 267 - -
Blo16g00396 319 ProSiteProfiles Protein kinase domain profile. 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00396 319 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00396 319 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 300 - -
Blo16g00396 319 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00396 Blo-Chr16:14168693 Blo17g00427 Blo-Chr17:5089468 0 dispersed
Blo16g00396 Blo-Chr16:14168693 Blo16g00397 Blo-Chr16:14244132 2.32E-77 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84745 PF00069 Pkinase 4.30E-53 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00396 - - zju:107424505 376.711