Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00434 ATGGATCGAAGGGACCTTTCGGCGTTGTCCAGCTCGCAATCGTTCTATATGCAGAGGGGAATGACTAGTTCTGGGTCTAATCCTCATCCTGGATTGCAAGGAACTTCTCAAGTTCTTCGGTCGATAACCAGTCAAACTGCTCATATGCATTCCAATGTCGGGGGAAACACAATTGGGTCAACAATACAGGTTGAATCGTCCCAACCGATGACAGCTCATGGCATCAACTTAGGTGCACAATCATTAATGCCATCGACTGAGCCGATGAAGAGACGGAGGGGAAGACCTCGAAAGTATGGCTCAGACGGGACCGTCTCATTGGCTTTGTCCCCATCGGCATCAGCCAATCCGGGAATGGTATCACCTCATGTGAAGCGGGGAAGAGGCCGACCTCCTGGGACTGGAAGGAAACAACAATTAACTTCTCTTGGTGAATGGCTTTCTGGTTCAGCTGGGATGGGTTTCACTCCCCATATTATCTCCATTGGAGTAGGAGAAGACATTGCTGCAAAGATAATGTCATTTTCACAGCAGGGGCCTAGAGCAATATGCATTTTATCGGCCAATGGTGCTATCTCCACCGTGACTCTTCGTCAGCCTTCGACTTCCGGTGGCACAGTGACGTATGAGGGACGATTTGAGATAGTCTGTCTATCGGGGTCGTACCTACTCAATGACGGCATCGGATCTCGCAACCGGAATGGTGGTTTAAGTGTCTCCCTTGCCAGTCCTGACGGCCATGTGATTGGCGGCAGGGTTGGCGGAGTGCTTATTGCTGCAAGCCCCGTTCAGGTGATTCTGGGAAGCTTTGTGTGGGGTGAATCGAGAACAAAGAACAAAAGGAGGGAAGCTTCCGAAGGCGTGATAGACTCGGACCAGCAGTCGTCGGAGAATGCGGCTACATTGAACACTGTCGGTCTAGGCTCAGCTTCCTCCCCGCTTGGAGTTTGGCCAACTCCACAGTCAGTGGATATACGAAACGCCCACATTGACATCGACTTGATGAGAGGATAA 1014 50.89 MDRRDLSALSSSQSFYMQRGMTSSGSNPHPGLQGTSQVLRSITSQTAHMHSNVGGNTIGSTIQVESSQPMTAHGINLGAQSLMPSTEPMKRRRGRPRKYGSDGTVSLALSPSASANPGMVSPHVKRGRGRPPGTGRKQQLTSLGEWLSGSAGMGFTPHIISIGVGEDIAAKIMSFSQQGPRAICILSANGAISTVTLRQPSTSGGTVTYEGRFEIVCLSGSYLLNDGIGSRNRNGGLSVSLASPDGHVIGGRVGGVLIAASPVQVILGSFVWGESRTKNKRREASEGVIDSDQQSSENAATLNTVGLGSASSPLGVWPTPQSVDIRNAHIDIDLMRG 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 17141839 17143692 + BLOR07682 Blo16g00434 71625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00434 337 ProSiteProfiles PPC domain profile profile. 151 292 IPR005175 -
Blo16g00434 337 MobiDBLite consensus disorder prediction 81 138 - -
Blo16g00434 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 157 271 IPR005175 -
Blo16g00434 337 CDD DUF296 156 270 IPR005175 -
Blo16g00434 337 SMART AT_hook_2 125 137 IPR017956 GO:0003677
Blo16g00434 337 SMART AT_hook_2 90 102 IPR017956 GO:0003677
Blo16g00434 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 155 273 - -
Blo16g00434 337 Gene3D - 157 291 - -
Blo16g00434 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 41 299 - -
Blo16g00434 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 41 299 IPR039605 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01107 Blo-Chr2:42065849 Blo16g00434 Blo-Chr16:17141839 1.77E-87 dispersed
Blo03g00211 Blo-Chr3:4867311 Blo16g00434 Blo-Chr16:17141839 5.70E-90 dispersed
Blo03g00386 Blo-Chr3:9277536 Blo16g00434 Blo-Chr16:17141839 2.63E-67 dispersed
Blo10g00324 Blo-Chr10:4887239 Blo16g00434 Blo-Chr16:17141839 1.01E-36 dispersed
Blo16g00434 Blo-Chr16:17141839 Blo06g01099 Blo-Chr6:34289484 2.61E-58 dispersed
Blo12g00844 Blo-Chr12:26720425 Blo16g00434 Blo-Chr16:17141839 4.39E-26 transposed
Blo17g00908 Blo-Chr17:29889996 Blo16g00434 Blo-Chr16:17141839 1.18E-69 transposed
Blo16g00434 Blo-Chr16:17141839 Blo02g00353 Blo-Chr2:3792539 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00434 - - rcu:8261862 446.047