Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00453 ATGCGGGCTTCGGCCCAAAGCGGACAATATTGTACTGGGAGCACCGGAGGACGTTACAAATGCTATCAGAGCGAAATCCCAACTGGAAGTGTGGCTGACGAGGACGTCGGGTCCTCAAGGGGGGAGATTGTGGCATCCCGCCCTGTGAAGGCCAGGAAAGACCCAGTTGTGGGTCCGGCCCATATCAGGGGGGCACAATCCCACATCGCTTGGGAGAGTAGAAAATGCATGTTTACTTTGAGATTTTTGAAAATTTCTTCCTCTGGAGTCTACCTTGAAGTGGCAATCTTGATAATAATAAACGCTGTCGAAGAAGGAAAATCTTCTAAATCGGAAAAATCATCTTCACCATCACAGCCCCAGAATCAGACAAATCAGGCTCACCAAACTAATATTCAAGTGTATCCTGATTGGGCAGCCTTGCAGGCATACTATGGTCCTAGAGTTACACTTCCACCATATTACAACTCGGCTGTGGCTTCAGGTCATGCTCCGCATCCCTACATGTGGGGACCACCTCAGCCCATGATGTCACCTTATGGAGCGCCCTATGCAGCAATTTACCCACATGGAAGTGTGTATGCCCATCCAGCTGTAACTCTTGGTCCACATTCACAAGCTCATGGGGTACCCACTTCACCAATTACTGCTGGAACTCCTTTGAATGCTGAAACTCCAAAGTCATCGGGAAACACAAATGGAGGTCTGATGAAAAAACTAAAAAGGTTTGATGGACTCGCAATGTCAATAGGCAATGGTAATTCCCAGAATGTAGATGGTGGAGTAGAACATATGCTGTCCCAGAGTGGAGAAACGGATGGTTCAAGTGATGGAAGTGATGTGAACATGGCCATGGCTAGTCAACCAAGGAGGAGAAGAAGCAGAGAGCAAACACCAACTCCTGGCAAAGATGAGAAAAGTGAGTCACAGGACACTTCGGTTATTCCTGGGGAGATAACTGGGGCTTCTGGTAATAAGGTAGTGGGCACAACTATTACCTCTTGTGTGATGGGAAAATTGATTGGACCTCTGGGTTCGCCTACCATGTCAACTGCTTTGGAGCTCAAGAACCCTGTTAGTACAAATATGATTACTGCAACTACTGTTCCTCAAACTTGTCCTGTATTGCCTGAAAGTTGGATGCAGAATGAAAGAGAACTAAAACGTGAAAGGAGAAAACAATCTAATAGAGAGTCTGCTAGGCGGTCAAGGTTGAGGAAACAGGCTGAAACAGAGGAGCTAGCAGTGAAGGTTGATTCCATGATGGCTGAAAACGACGCCATTAGATCTGAAATTAATCGTTTGACTGAAAAATCTGAGAAACTCAAGCAAGAAAATGTCAACCTATTGGAGAAACTTAAAACCGTGCAAACTGGACGAAGAAAAGATGGTACGGCTGAGAAGGCAGAAAATCTACTATCAAGAGTAAACAATTCAGATTCTGTGGAAAGAAGCATTGATGAGGAGAATAAGAGGTACAAAAAATCCTCAAATTCCAACGTGAAGCTGCGTCAACTTTTGGGTGCAAGTCCTAGGACGGATGCTGTGGCTGCCGGATGA 1560 45.77 MRASAQSGQYCTGSTGGRYKCYQSEIPTGSVADEDVGSSRGEIVASRPVKARKDPVVGPAHIRGAQSHIAWESRKCMFTLRFLKISSSGVYLEVAILIIINAVEEGKSSKSEKSSSPSQPQNQTNQAHQTNIQVYPDWAALQAYYGPRVTLPPYYNSAVASGHAPHPYMWGPPQPMMSPYGAPYAAIYPHGSVYAHPAVTLGPHSQAHGVPTSPITAGTPLNAETPKSSGNTNGGLMKKLKRFDGLAMSIGNGNSQNVDGGVEHMLSQSGETDGSSDGSDVNMAMASQPRRRRSREQTPTPGKDEKSESQDTSVIPGEITGASGNKVVGTTITSCVMGKLIGPLGSPTMSTALELKNPVSTNMITATTVPQTCPVLPESWMQNERELKRERRKQSNRESARRSRLRKQAETEELAVKVDSMMAENDAIRSEINRLTEKSEKLKQENVNLLEKLKTVQTGRRKDGTAEKAENLLSRVNNSDSVERSIDEENKRYKKSSNSNVKLRQLLGASPRTDAVAAG 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 18062777 18074484 + BLOR07701 Blo16g00453 71644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00453 519 MobiDBLite consensus disorder prediction 251 283 - -
Blo16g00453 519 MobiDBLite consensus disorder prediction 109 128 - -
Blo16g00453 519 MobiDBLite consensus disorder prediction 384 411 - -
Blo16g00453 519 SMART brlzneu 384 448 IPR004827 GO:0003700|GO:0006355
Blo16g00453 519 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 391 406 IPR004827 GO:0003700|GO:0006355
Blo16g00453 519 MobiDBLite consensus disorder prediction 112 128 - -
Blo16g00453 519 Pfam Disordered region downstream of MFMR 235 363 - -
Blo16g00453 519 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 386 449 IPR004827 GO:0003700|GO:0006355
Blo16g00453 519 CDD bZIP_plant_GBF1 389 438 IPR045314 GO:0003700|GO:0006355
Blo16g00453 519 Pfam G-box binding protein MFMR 104 199 IPR012900 -
Blo16g00453 519 MobiDBLite consensus disorder prediction 214 235 - -
Blo16g00453 519 MobiDBLite consensus disorder prediction 251 322 - -
Blo16g00453 519 Pfam bZIP transcription factor 384 446 IPR004827 GO:0003700|GO:0006355
Blo16g00453 519 PANTHER G-BOX-BINDING FACTOR 3-RELATED 104 519 IPR044827 GO:0003700|GO:0006355|GO:0043565
Blo16g00453 519 Gene3D - 387 463 - -
Blo16g00453 519 MobiDBLite consensus disorder prediction 289 311 - -
Blo16g00453 519 MobiDBLite consensus disorder prediction 214 237 - -
Blo16g00453 519 MobiDBLite consensus disorder prediction 456 519 - -
Blo16g00453 519 PANTHER G-BOX-BINDING FACTOR 3 104 519 - -
Blo16g00453 519 SUPERFAMILY Leucine zipper domain 387 444 IPR046347 GO:0003700|GO:0006355
Blo16g00453 519 MobiDBLite consensus disorder prediction 481 496 - -
Blo16g00453 519 Coils Coil 418 452 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00232 Blo16g00453 CCT
Blo01g00232 Blo16g00453 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00785 Blo-Chr5:28923433 Blo16g00453 Blo-Chr16:18062777 9.85E-49 dispersed
Blo06g00126 Blo-Chr6:5096307 Blo16g00453 Blo-Chr16:18062777 1.78E-52 dispersed
Blo16g00453 Blo-Chr16:18062777 Blo19g00336 Blo-Chr19:22208428 7.98E-14 dispersed
Blo17g00411 Blo-Chr17:4857971 Blo16g00453 Blo-Chr16:18062777 5.46E-11 dispersed
Blo11g00931 Blo-Chr11:19827698 Blo16g00453 Blo-Chr16:18062777 7.13E-22 transposed
Blo15g00032 Blo-Chr15:262691 Blo16g00453 Blo-Chr16:18062777 3.32E-06 transposed
Blo01g00232 Blo-Chr1:2894886 Blo16g00453 Blo-Chr16:18062777 6.35E-96 wgd
Blo12g00234 Blo-Chr12:15001139 Blo16g00453 Blo-Chr16:18062777 3.37E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13406 PF16596 MFMR_assoc 1.90E-21 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00453 K09060 - jre:108996456 494.197