Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00474 ATGAGGGTGGAAGAGGGTTTTGGCGGCGGCGCGTGGAATGACGAGGAAAAGGCCATGCTGGATGCAGTATTGAGCAGTCGGGCCTTCAACTACTTGATATCGCACTCGGTTTCCAATGACTGTCTACTAACGGCGGCCGGAAGTGACGAGAACTTGCAAAACAAGCTTTCCAATCTGGTGGACATCCCAAACGCATCCAATTTCAGCTGGAACTACGCCATTTTCTGGCAAATTTCGAAGTCGAAATCCGGTGAGTGGGTTTTGGGATGGGGAGACGGGTGCTGCCGAGAGCCGAGAGAAGATGAAGAGGCAGAAGCGTCGAGAATTCTCAGTCTCCGCGTAGACGACGAAAGGCTGCAGCAAATGAGGAAAATAGTCCTGCAGAAACTCCATATCTTGTTCGGAGGATCCGAGGAAGATAATTACGCTCTTGGATTAGACAAAGTGACTGATACGGAGATCTTTTTCCTCGCCTCTATGTACTTCACTTTTCCTCGAGGAGAAGGTGGACCTGGTAAGTGTTTAGCTTCTGCCAGACACGTATGGATCGTCAATTTGCTGCAATCTCAATACGATTACTGCGTTCGATCCTTTTTAGCTAAATCTGCTGGAATCAGAACCGTAGTTTTAGTACCCACTGATGTTGGAGTGGTAGAAATTGGTTCTGTGAAATCTGTTTCCGAGAGCTTAGATTTGGTGAATTCCATCAGAACCTTATTTTCCTCTCAGCCGTGTTTTAGCAGGCTGGAGCCGCCATTGGCGACAGATGAGAAGAAAGGCGAGAGTACCCATTTTAAAGAAGGGAATTCTAAGATTTTTGGGCAAGAGTTTAGTTCTGTGAAAATGGGTCGATCCAATTTCAGAGAGAAGCTTGCTATTAGAAAGATGGAGGATAGATCTTGGGAAGGTAATGCAAATGGAGGAAGAATTGCATTTCAGAGCCACCCTCAAAATGGAATGCTTACTTCCAATTGGGGCATTCACGGGCTCAAACAAGGAAGCTCTGCAGAAGTTTACATGCCATCAATACTAAACAACGCACAGCAAGAGCTCGTTAATGGTGGAAGAGAAGAGTTTCGGGTTGGATATTATCAACAGCAAATGCAGATTGATTTTTCAGGGGCAACCTCACGACCTTCTGTGATTTCGAGGCTTAATGCAGAATCTGAGCATTCGGATGCAGAAGCTTCCTGCAAAGAAGAGAGACCAATAAGCATAGCAGATGAAAAGAGGCCGAGAAAACGAGGGAGAAAGCCTGCAAACGGTCGAGAAGAGCCCCTCAATCACGTGGAAGCAGAGAGACAGAGAAGGGAGAAGCTGAACCAGCGATTCTACGCCTTACGAGCCGTAGTCCCAAACATATCCAAAATGGACAAAGCCTCTTTGTTAGGAGACGCCATAGCTTACATAAACGAGCTGCAAGCAAAGCTCAAAGCCATGGAAGTAGAGAGAAAAGAGAACACTTGGAGAGTAAATCCAGAAAATCAAAATCAGGTGGAAATGGAAGCTGTGAATGATGAGATAATTGTAAGACTGAGGTGCCCTTTGGAGTCACACCCTGCATATAAAGTAATCCAAGCATTTAAAGACGCTCAGTTAACTGTTGTAGACTCAAAACTCTCAGCCGCAGGAGGTACAGTTTACCATAGTTTTGTGATAAAATCTCAAGGATCTGAGCTGCTGACGAAGGAAAAGTTAATGGCTGCTATTTCCCATGAATCCAACTTGACACAACCATTGTCCCCATCAACTGGATAG 1758 45.62 MRVEEGFGGGAWNDEEKAMLDAVLSSRAFNYLISHSVSNDCLLTAAGSDENLQNKLSNLVDIPNASNFSWNYAIFWQISKSKSGEWVLGWGDGCCREPREDEEAEASRILSLRVDDERLQQMRKIVLQKLHILFGGSEEDNYALGLDKVTDTEIFFLASMYFTFPRGEGGPGKCLASARHVWIVNLLQSQYDYCVRSFLAKSAGIRTVVLVPTDVGVVEIGSVKSVSESLDLVNSIRTLFSSQPCFSRLEPPLATDEKKGESTHFKEGNSKIFGQEFSSVKMGRSNFREKLAIRKMEDRSWEGNANGGRIAFQSHPQNGMLTSNWGIHGLKQGSSAEVYMPSILNNAQQELVNGGREEFRVGYYQQQMQIDFSGATSRPSVISRLNAESEHSDAEASCKEERPISIADEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKAMEVERKENTWRVNPENQNQVEMEAVNDEIIVRLRCPLESHPAYKVIQAFKDAQLTVVDSKLSAAGGTVYHSFVIKSQGSELLTKEKLMAAISHESNLTQPLSPSTG 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 18744818 18746575 - BLOR07722 Blo16g00474 71665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00474 585 MobiDBLite consensus disorder prediction 388 435 - -
Blo16g00474 585 Gene3D - 417 488 IPR036638 GO:0046983
Blo16g00474 585 PANTHER TRANSCRIPTION FACTOR MTB1 10 578 - -
Blo16g00474 585 SMART finulus 430 479 IPR011598 GO:0046983
Blo16g00474 585 Pfam Helix-loop-helix DNA-binding domain 428 474 IPR011598 GO:0046983
Blo16g00474 585 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 240 IPR025610 -
Blo16g00474 585 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 427 491 IPR036638 GO:0046983
Blo16g00474 585 Coils Coil 470 490 - -
Blo16g00474 585 PANTHER MYC 10 578 IPR045084 GO:0003700|GO:0006355
Blo16g00474 585 MobiDBLite consensus disorder prediction 387 435 - -
Blo16g00474 585 CDD bHLH_AtAIB_like 421 486 - -
Blo16g00474 585 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 424 473 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00220 Blo16g00474 CCT
Blo02g00322 Blo16g00474 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00323 Blo-Chr2:3293052 Blo16g00474 Blo-Chr16:18744818 0 dispersed
Blo03g00858 Blo-Chr3:34406074 Blo16g00474 Blo-Chr16:18744818 1.28E-83 dispersed
Blo16g00474 Blo-Chr16:18744818 Blo19g00189 Blo-Chr19:8412187 1.62E-31 dispersed
Blo17g00097 Blo-Chr17:753235 Blo16g00474 Blo-Chr16:18744818 7.93E-11 dispersed
Blo16g00474 Blo-Chr16:18744818 Blo16g00475 Blo-Chr16:18791477 0 tandem
Blo07g01023 Blo-Chr7:30023841 Blo16g00474 Blo-Chr16:18744818 2.16E-95 transposed
Blo01g00251 Blo-Chr1:3210230 Blo16g00474 Blo-Chr16:18744818 1.24E-16 wgd
Blo12g00220 Blo-Chr12:14407904 Blo16g00474 Blo-Chr16:18744818 0 wgd
Blo16g00474 Blo-Chr16:18744818 Blo02g00322 Blo-Chr2:3288369 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13410 PF14215 bHLH-MYC_N 3.50E-53 CL0161 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00474 - - qsu:111989355 773.467