Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00514 ATGAAGAAAGCATATCCTCCAACTCATTTTCTATCTCTCGGATTTCAGCTTCTTTTTGTGCTTCAGGGTTTGAGTGGAGATCGATTAGAGATCACGTTCTTCAACGATGAGGCGACTGTTACGTTCAAAAATGAACATCAGGTTGCTATTTTAGAGTTTGGGGCAATCCTCGTCTGTTCTAAGAAGCTAGTGAACTTGATAGCTTCTCTACACTTGTACGCCCCATCCGACCTCGGCCTCATCTTTTCGTTGTCGATCAAGTCTGTGAAGGAGTTGAGTGGCCAAGTATGCCATATTTGCGGGGATGAGATAGAAATCACGTTTGACGGAGATCCGTTCGTCGCCTGTAACGAATGCGCTTTCCCTGTGTGCAGACCTTGCTACGAGTATGAGAGAAGAGAGGGAAATCAAGCCTGCCCTCAGTGTAAAACTAGATATAAACGCATCAAAGGCAGTCCAAGGGTTGATGGTGATGAGGAAGAAGATGACATTGATGATTTGGACAATGAATTTGACTACGGAAACCTTGACGGAATGGCGTCGACAGAAGCTATGCTTAGTTCTCAATATAACACTGTCCGTAGTTCATCTGGAATTTCCATTCATGCAGAAAACAAATCCTCTTCCCTCCCCACTGAGATCCCATTACTTACTTATGGCGAGGAGAATGAAAGTAACGATTCTGATTCATCTTCTAATCGACATGCTCTTATCGTGCCACCTTTTATGGATCATCGAAACAAAGTTCATCATATGCCTTCTTCTGATCCTTCTGCACCTTTGCAATCCAGACCTATGGTTCCTAAGAAAGACATTGCAGTTTATGGGTATGGGAGTGTGGCATGGAAGGACAGAATGGATGAGTGGAAGAGAAGGCAAAATGAGAAACTTCAGGTGATGAACCACGACGGTGGTGGTAAATATGACGAAAACAATCTTGACGATGCTGATATCCCCATGATGGATGAGGGGAGGCAGCCACTATCGAGGAAATTACCCATCTCTTCAAGCAAGATAAATCCATACAGATTAATTATAATCCTCCGCCTCGTTATCATTGGCTTCTTTCTCCATTATCGACTTCGTCATCCAGTCAAGGATGCATATGGTTTGTGGTTGACATCTGTTATATGTGAGATTTGGTTTGCTGTTTCGTGGATTTTAGATCAGTTCCCTAAATGGTACCCAATTGAACGCGAAACGTATCTTGATCGCCTATCACTTAGGTATGAAAAAGAAGGGAAGCCTTCGGAGTTAGCCGGTGTAGACATCTTCGTGAGTACAGTTGATCCCATGAAAGAACCTCCGTTGATTACTGCAAACACAGTTCTTTCCATCTTGGCTGTCGATTATCCGGTCGAGAAAGTTGCATGCTATGTCTCGGACGATGGAGCTGCAATGTTAACGTTTGAAGCTCTTTCCGAGACGTCGGAGTTTGCTAGAAAGTGGGTCCCGTTTTGCAAAACGTTCAATATCGAGCCCCGGGCCCCGGAGTGGTATTTCGGTCAGAAGATTGATTACTTGAAGAACAAAGTTCATCCAGCCTTTGTGAAGGAAAGGCGGGCAATGAAGAGGAAATACGAAGAATTTAAGGTCAAAATAAATGGACTTGTAGCGATGGCACAAAAAGTCCCTGAGGATGGCTGGACGATGCAGGATGGAACTCCATGGCCAGGGAACCTTGTTCGGGACCATCCCGGCATGATTCAGGTCTTTCTGGGCGATAATGGTGTTCATGATTGCGAAGGAAATGAGTTACCTCGGTTGGTTTATGTTTCTCGTGAAAAGAGACCAGGGTTTGAACACCATAAAAAAGCTGGGGCTATGAACGCACTGGTACGAGTTTCGGCCGTTCTTTCAAATGCTCCATATATTCTGAATGTCGACTGTGATCATTACATCAATAACAGCAAGGCACTTAGAGAAGCTATGTGTTTCATGATGGACCCTCAGGCAGGGAAGAAAGTTTGCTATGTGCAGTTTCCTCAAAGGTTCGATGGGATCGATCGACATGATAGATACTCGAATCGAAATGTTGTGTTTTTCGATATCAACATGAAAGGTTTAGATGGCATACAAGGGCCGATTTACGTTGGAACTGGGTGTGTATTTCGAAGGCAAGCGCTATATGGATATGATGCTCCAATAAAAAAGAAGCCTCCCAGCAAAACATGTAATTGTTTGCCTAAATGGTGCTGTCTTTGCTGCGGTTCGAGAAAGAACAAGAAGGGAAGAGGTGAAAATAAGACAAAGAAGAAAACAAAGCATAGAGAAACATCGAAGCAAATACATGCGCTTGAAAATATTGAAGAGCAAATTGAAGGCAAGAGCAGATTGTCTAGATCTTCTCAATCTAACGCAAAAATATCTTCGGAGACTACCCAAATGAAATTAGAGAAGAAGTTTGGGCAATCTCCGGTTTTTGCTGCTTCTACGATATTGGAAAACGGTGGAGTTCCGCACGATATCAGTCCGGCATCACTCTTGAGAGAAGCCATTCAAGTGATTAGTTGTGGGTATGAAGATAAAACAGAATGGGGAAAAGAGGTTGGCTGGATTTATGGTTCGGTGACGGAAGATATTCTGACGGGATTTAAGATGCACTGCCATGGATGGCGATCTGTGTATTGCATACCTCGTCGACCTGCCTTCAAAGGGTCGGCTCCTATTAACCTCTCGGATCGTTTACACCAAGTTCTTCGGTGGGCCCTTGGCTCTGTCGAGATTTTCTTGAGTAAGCACTGTCCAATTTGGTATGGCTATGGAGGTGGTTTAAAATGGTTGGAGCGATTCTCGTATATTAACTCAGTCGTTTATCCATGGACCTCTATCCCCTTGCTCGTCTATTGTAGCCTTCCGGCCATTTGTCTCCTAACTGGAAAATTTATCGTCCCGGAGATTAGCAACTATGCAAGTCTAATCTTCATAGCACTCTTCATATCCATCGCTGCAACTGGAATCCTTGAAATGCAATGGGGCGGCGTGGGAATCGACGACTGGTGGAGAAATGAGCAGTTTTGGGTAATCGGAGGTGTTTCCTCACATCTCTTTGCTCTATTTCAAGGCCTCCTCAAAGTTTTGGCCGGAGTTAGCACAAATTTCACTGTCACATCCAAAGCGGCCGACGATGGGGAATTCTCGGAACTCTACATTTTCAAATGGACATCTCTTTTGATCCCCCCGACGACATTGCTCATCATAAACATAGTGGGTGTGGTGGTCGGAATCTCGGATGCCATCAACAACGGGTACGATTCGTGGGGCCCACTTTTTGGAAGACTGTTCTTTGCATTCTGGGTTATAATCCACCTATATCCCTTCCTGAAGGGATTATTAGGCAAACAAGATAGATTGCCCACAATTATTGTGGTCTGGTCAATATTACTGGCCTCAATTTTGACCCTTCTGTGGGTGAGGATCAATCCATTTGTGTCAAGAGATGGCCCTGTTTTAGAAATTTGTGGATTGAACTGTGATTAG 3480 44.2 MKKAYPPTHFLSLGFQLLFVLQGLSGDRLEITFFNDEATVTFKNEHQVAILEFGAILVCSKKLVNLIASLHLYAPSDLGLIFSLSIKSVKELSGQVCHICGDEIEITFDGDPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDIDDLDNEFDYGNLDGMASTEAMLSSQYNTVRSSSGISIHAENKSSSLPTEIPLLTYGEENESNDSDSSSNRHALIVPPFMDHRNKVHHMPSSDPSAPLQSRPMVPKKDIAVYGYGSVAWKDRMDEWKRRQNEKLQVMNHDGGGKYDENNLDDADIPMMDEGRQPLSRKLPISSSKINPYRLIIILRLVIIGFFLHYRLRHPVKDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELAGVDIFVSTVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKTFNIEPRAPEWYFGQKIDYLKNKVHPAFVKERRAMKRKYEEFKVKINGLVAMAQKVPEDGWTMQDGTPWPGNLVRDHPGMIQVFLGDNGVHDCEGNELPRLVYVSREKRPGFEHHKKAGAMNALVRVSAVLSNAPYILNVDCDHYINNSKALREAMCFMMDPQAGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPIKKKPPSKTCNCLPKWCCLCCGSRKNKKGRGENKTKKKTKHRETSKQIHALENIEEQIEGKSRLSRSSQSNAKISSETTQMKLEKKFGQSPVFAASTILENGGVPHDISPASLLREAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPRRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSKHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASLIFIALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTLLIINIVGVVVGISDAINNGYDSWGPLFGRLFFAFWVIIHLYPFLKGLLGKQDRLPTIIVVWSILLASILTLLWVRINPFVSRDGPVLEICGLNCD 1159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 20825520 20835335 - BLOR07762 Blo16g00514 71705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00514 1159 ProSiteProfiles Zinc finger RING-type profile. 97 143 IPR001841 -
Blo16g00514 1159 Pfam Cellulose synthase 422 1147 IPR005150 GO:0016020|GO:0016760|GO:0030244
Blo16g00514 1159 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 79 1158 - -
Blo16g00514 1159 Pfam Zinc-binding RING-finger 87 163 IPR027934 -
Blo16g00514 1159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 170 IPR013083 -
Blo16g00514 1159 CDD mRING-HC-C4C4_CesA_plant 95 145 - -
Blo16g00514 1159 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 564 714 IPR029044 -
Blo16g00514 1159 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 9 [UDP-FORMING]-RELATED 79 1158 - -
Blo16g00514 1159 SUPERFAMILY RING/U-box 86 169 - -
Blo16g00514 1159 SUPERFAMILY Nucleotide-diphospho-sugar transferases 436 978 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00493 Blo16g00514 CCT
Blo05g00493 Blo16g00514 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01231 Blo-Chr6:35938861 Blo16g00514 Blo-Chr16:20825520 1.67E-15 dispersed
Blo12g00781 Blo-Chr12:26213649 Blo16g00514 Blo-Chr16:20825520 0 dispersed
Blo12g01081 Blo-Chr12:28512601 Blo16g00514 Blo-Chr16:20825520 0 dispersed
Blo15g00320 Blo-Chr15:3690420 Blo16g00514 Blo-Chr16:20825520 4.10E-11 dispersed
Blo16g00514 Blo-Chr16:20825520 Blo16g00915 Blo-Chr16:37045354 0 dispersed
Blo16g00514 Blo-Chr16:20825520 Blo01g01734 Blo-Chr1:57039789 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00514 K10999 - rcu:8273696 1892.47