Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00517 ATGAGACCTTTATCTTCCAGTCTTCTTCTCCATTTTTTTCCTTCTTCTTCCTTTCCTTCATCCTCACAGTCCCCTCTTTTCTTGCTTCAGTTTTCCCGCTTTTCAACTTCAAATTCTTCTTCCTTCCATTCTTCTTCTACTTCTAAGCGGCACGATGTGGATTCCCGAGATGTGAGGGTTTCAGTGTGGTGGGACTTTGAGAATTGCCATTTACCTGCTGGAGTGAACGTGTTCAAGGTTTCCCATTTGATTACATCAGCGCTTAGATTCAATGGAATCAAGGGTCCTGTACAGATTACAGCATTTGGGGATGTAATGCAGCTCTCAAGGGCGAATCAGGAGGCTCTCTCCTCAACGGGGATCAATCTTACCCATGTTCCTCAAGTGAAACTTAAATCTTGGGAAGGAAGTGGTTGTTCGTCTGAGTACTTTAGAGGTGGAAAAAATAGTGCTGACAGGTCTCTTCTTGTAGATCTCATGTATTGGGTTTCTCAAAATCCTCCACCAGCACATCTCCTTTTGATCTCGAGCGACAGGGACTTTGCCAGCATTTTACACCGATTAAGAATGAACAACTACAACATATTGCTTGCAAGTACAGAAAGGGCTCCTGGTGTTCTATGCAGTGCTGCAAGTATAATGTGGCACTGGAATGCATTGATTAAAGGAGAGACTTTTGTTGGAAAGTGCTTTAACCAACCACCAGATGGTCGATTTGGTTCTTGGTATAATCAATATAAAGTCCCTCTTGAAGATCCCTATACAGCCATCGAGCAACCATCTTCTTCGCGAGTAGAAGAGTTTCTTGAGCCGGATTCTGAGTCAAAGCTTCGTCCCATTCCCAAGGTTGTCATGAAGCAGATCCGTCAAATTTTGAAATCATATCCCAAAGGAGTTCTCCTTTCAGAGCTTCGCTCACAGTTGGCAAAAAGTAATGTCTCCATCGATAAAGACTTGTATGGCTATAAAAAATTTTGCCGTTTTCTCTTGTCAATGCCGCAAATCTTAAAGCTTCAACCTTCTGGTGATGGTCAATATGTAGTACTAGCAGTAAATGTAAGATCTATAGAACCTTTAGAGTCTAGTCGAGGTACATCTAGTGAAACTTTCGGTGATACTAATTCAAATGGTCATAATGTGAGTCTTCCGAGAGAAGATTTTAAACAAAGTTCTCATTTAGGGAGATCTGAAAGAGAATCTTCAGTTTCCCTAGCTCCTGAGCCAAATACCATTGAAAATTCAAAGCCTTCGCAATCAGATTGTGAAGTACACGATGTGATTAGCAGACTGGATATTTCTGGCGATTTGCCACCCATTTCAGGACAGGTTTTGCCACCCATTTCAGGACCGGATTCTGTGTCTGGTGTAGGTTTTTTAAGAAAGATTTGGAAGAAATGGTTTAGTGAAGATGATAGCAATACAGTGAATAAAAGTGGTAGTTTACCTGACAATAGTTATGGTGCAGATGCTACATCGAAGAAGGAAAATCACAACCATGTAGAAAACCATTCTTCTACTGAGAAATATATGGGAAAAAAAGCTGAAGAAAAAGATTTGAAATCAACGATTCAAGATGACCATCCTGTTTATGCTTTACCGAGTGGGGAGTTGGTCGTGAAAGATGAAGACAAAACCAATACAAAGTCTGGTATAATTGGCCGAGGAAGAAAATGGTTCAGATTTTGGGCCAGTGAATGCAGTGACAAAGTGAGCGATCAATATTCTGCACAACTGAATGAAGAAAAAGATCAATCTGGACATCATCTGCTTTCTGATAACTCTTTTTGGCATGACCTAGAATCATTTATGAAAACTCCCAAAGCATCAGTTCTCTTTTCAGGGTCAAAAACAAGGAAGGAGATGGCACAAAATTTGCAACAGGAAGGACCCTTGGCTCTTAGATTGCTCAGTAATTGTGTTCTACTTGAGCTGGTGGATCTAGTAATATCAGATAAAAAATGGGTGGAGGAAAACCCATCTCATATGTTGCCTTTCAAGCTAACTCTTTCAGTTCGAAAGAGTAGTTGTGAAGATTCCATCCACGGTTCAACTCAGTTGAGATCAATTTTTTCTAATGCACCAGCGAAGCCGAACTTGCAAAGATCTCTAGAAAGTGATCTGGATAAGAACAATAAAAACGGACTTCAAGCAGATGTTGCCAAAAATAAATCTGCAGAAAGGTCTTCTTCAAGTGACATATTAGGGGATTGTCAAAAGCTTGTGAATGAGGTTTTAAAAGAACACCCTCATGGATATAATATAAGCTTGTTTAGAAATCTTTTCTTGGAGAGATATGGATATCATCTTCAAGTGAAAAGCCTGGGTTATAAAAAGTTGGTATCCATGCTTGAAACATTACCTGGTGTGAAAATTGAGTCCTCTTTTATTTTTCCTTCCGGCCATTCCCCTGCGTGTGTTCCCTTTGATGAAAAGAAAGAACTTGATCATACAATGACAAATTCTGAAGGCGAATCATCAGACTCCTTGAAAAAGGATGATGATCTTGATTCTCCGTGGGAAGAATTGGGACCTATTGCCACCACGAGCTTCAGAAGAGATGACAAAGAAAAAGTACGAAGAGGAGGAGGAAAAACTAGTGAGAAATTACCTCAGGTTGAATATGAATCCCCCTTTTCAGATGATTATTTAACAGACTCTGAAGAAGAGAGCCTTTCTGCTCGAACTGCTGAGAAGATCAAGGAAAGAGAGAATGAGGAAAATAGCTCCTTGTTGCAAATTCTTGATTCCTGGTACAATCGCAAAGAAGGGGAGAAATCTGATGGGATGATCGACTTTTCTGCCGATAATTTCAAGCCATCAGGAACCGGCAACATAAGTGAAGCAAATAGAAGAAAGCAGAGGCCTCAAAAGAGCTACTCTTTTGTGTTAGACCCAGATGAAAATAACAAGGAGAAGCTCATTGATGGCATAATCGATAGCTTGAAGCAATCTAGCGAGTCGAGGCTGCGCATGTGA 2976 40.46 MRPLSSSLLLHFFPSSSFPSSSQSPLFLLQFSRFSTSNSSSFHSSSTSKRHDVDSRDVRVSVWWDFENCHLPAGVNVFKVSHLITSALRFNGIKGPVQITAFGDVMQLSRANQEALSSTGINLTHVPQVKLKSWEGSGCSSEYFRGGKNSADRSLLVDLMYWVSQNPPPAHLLLISSDRDFASILHRLRMNNYNILLASTERAPGVLCSAASIMWHWNALIKGETFVGKCFNQPPDGRFGSWYNQYKVPLEDPYTAIEQPSSSRVEEFLEPDSESKLRPIPKVVMKQIRQILKSYPKGVLLSELRSQLAKSNVSIDKDLYGYKKFCRFLLSMPQILKLQPSGDGQYVVLAVNVRSIEPLESSRGTSSETFGDTNSNGHNVSLPREDFKQSSHLGRSERESSVSLAPEPNTIENSKPSQSDCEVHDVISRLDISGDLPPISGQVLPPISGPDSVSGVGFLRKIWKKWFSEDDSNTVNKSGSLPDNSYGADATSKKENHNHVENHSSTEKYMGKKAEEKDLKSTIQDDHPVYALPSGELVVKDEDKTNTKSGIIGRGRKWFRFWASECSDKVSDQYSAQLNEEKDQSGHHLLSDNSFWHDLESFMKTPKASVLFSGSKTRKEMAQNLQQEGPLALRLLSNCVLLELVDLVISDKKWVEENPSHMLPFKLTLSVRKSSCEDSIHGSTQLRSIFSNAPAKPNLQRSLESDLDKNNKNGLQADVAKNKSAERSSSSDILGDCQKLVNEVLKEHPHGYNISLFRNLFLERYGYHLQVKSLGYKKLVSMLETLPGVKIESSFIFPSGHSPACVPFDEKKELDHTMTNSEGESSDSLKKDDDLDSPWEELGPIATTSFRRDDKEKVRRGGGKTSEKLPQVEYESPFSDDYLTDSEEESLSARTAEKIKERENEENSSLLQILDSWYNRKEGEKSDGMIDFSADNFKPSGTGNISEANRRKQRPQKSYSFVLDPDENNKEKLIDGIIDSLKQSSESRLRM 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21049055 21053543 - BLOR07765 Blo16g00517 71708

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00517 991 MobiDBLite consensus disorder prediction 472 489 - -
Blo16g00517 991 MobiDBLite consensus disorder prediction 472 519 - -
Blo16g00517 991 CDD LOTUS 281 349 - -
Blo16g00517 991 Pfam OST-HTH/LOTUS domain 738 793 IPR025605 -
Blo16g00517 991 Pfam OST-HTH/LOTUS domain 284 348 IPR025605 -
Blo16g00517 991 Gene3D - 282 352 IPR041966 -
Blo16g00517 991 PANTHER LIMKAIN B LKAP 17 941 IPR024768 GO:0005777|GO:0010468|GO:1903231
Blo16g00517 991 Gene3D - 52 218 - -
Blo16g00517 991 Pfam NYN domain 59 211 IPR021139 GO:0004540
Blo16g00517 991 ProSiteProfiles OST-type HTH domain profile. 733 809 IPR025605 -
Blo16g00517 991 MobiDBLite consensus disorder prediction 490 519 - -
Blo16g00517 991 ProSiteProfiles OST-type HTH domain profile. 280 352 IPR025605 -
Blo16g00517 991 MobiDBLite consensus disorder prediction 847 866 - -
Blo16g00517 991 PANTHER EMB|CAB71880.1 17 941 - -
Blo16g00517 991 MobiDBLite consensus disorder prediction 396 417 - -
Blo16g00517 991 MobiDBLite consensus disorder prediction 360 421 - -
Blo16g00517 991 Gene3D - 728 795 IPR041966 -
Blo16g00517 991 CDD LOTUS 734 791 - -
Blo16g00517 991 MobiDBLite consensus disorder prediction 817 838 - -
Blo16g00517 991 Pfam OST-HTH Associated domain 616 665 IPR025677 -
Blo16g00517 991 MobiDBLite consensus disorder prediction 928 966 - -
Blo16g00517 991 MobiDBLite consensus disorder prediction 360 386 - -
Blo16g00517 991 CDD PIN_limkain_b1_N_like 59 199 - -
Blo16g00517 991 MobiDBLite consensus disorder prediction 817 892 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00517 - - - qsu:112027506 843.188
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00546 Blo-Chr11:5103437 Blo16g00517 Blo-Chr16:21049055 5.68E-35 dispersed
Blo15g00745 Blo-Chr15:25230472 Blo16g00517 Blo-Chr16:21049055 3.76E-21 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1214 . Blo16g00517 . . . Bpe13g00010 . . . Cmo20g01089 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01353 . . . . Bma06g00530 . . . . Cma20g01079 . . . Cpe16g00066 Bhi10g02348 . . . . . . Cla02g00078 Cam02g0081 Cec02g0083 Cco02g0075 Clacu02g0079 Cmu02g0077 Cre02g0417 Lsi10g00700 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005338 1 4 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00517 Blo_Chr16 FPKM 5.273574 5.808572 6.864865 7.990893 7.367673 5.648228 7.705436 9.725962 8.744684 11.381734