Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00522 ATGTCCAAATCAAAGTTCGCTCTCACTTCCATGGCTTCTCTTTTCTTCCTCTCAATTATCTCTCCCCTCCTCTTCTTCTCCTTATCTTCTGCATCACCCCCCCATCATTCGTGTGAACGACCCCATTTCACAGCGCCGCCACTAACAGTGCAGCAGCACTCGGCCCTGTCAGTCCAACCGGGGATCCGACAAGCCTGCATGGCGACCCGATTTCCAGACCAATGCGAAACGTCCTTGTCTCAATCATCTTACATCCCTCCAAACCCGAGCCCGGTTCAGATCATTCAATCTGCCATCCTGGTTTCGTTGGACAACCTCAAAACTGCACAATCAATGGTGGAGGATATTCTGAAGGAGTCCACGGGGAATCAGAACCGAACCGGCGCCGCCAAAATCTGCCAGGAGGTGCTCAGATACTCGGACTACCGCATCTCATGCACTAATGAGAGTATGACAAGCGGAAAAATAAAAAACTGCCGGGCTTGGATGAGCGCCGCCCTTTCATACCAATACGATTGCTGGTCGGCGTTAAAATACGTAAACGATACACAAGTGGTGGACAAAACGATGTCGTTTTTAGATTCCCTGACGGGGCTGTCGAGCAATGCCCTCAGCATGATAGTCGCGTACGATGCTTTAGGCAACCAGACCGGATCGTGGGGTCCACCCAAGACCGAGAGGGACGGGTATTGGGAGGGAGGAGGGTCGGGTTCGACGGGGTCCGATTCCCAGTTCGGCGGTGGATTTGCGTCGGAGTTAACACCAAACATGACTGTGTGTAATGATGGAAGTGAAGGCTGTTGCAAGACTGTACAAGAAGCTGTGAATGCCGCACCAGACAACGATTCTTCCCGTAAGTTTGTAATTCACATAAAAGGAGTTTACGAAGAGACGGTGAGGGTGCCACTAGAAAAGAAAAACATCGTGTTCTTGGGAGACGGGATGGGCAAAACGGTCATTACAGGGTCCTTAAATGTGGGGCAACCTGGTATTTTCACCTACACCTCAGCAACAGTTGCAGGAGTTGCTGGTGACGGGTTTATGGCAAGGGGCTTGACGATCCAAAACACCGCAGGACCCGATGCTCATCAAGCCGTAGCTTTCCGATCTGATAGTGATCTCTCCATCATTGAAAATGTTGAGTTTATTGGCCACCAAGACACTCTCTATGCTCACTCTCTTCGCCAATTCTACAAATCATGTCGAATTCAAGGCAACGTCGATTTCATTTTCGGAGATTCTGCTTCTGTTTTCCAAAATTGTACCATCTTAATTAGTCCTCGAGAAATCGATCCACAACAAGGTAAAAGCGATGTCATTGTTGCTCACGGAAGAATTGATCCGGCCCAATCGACTGGCTTTGTCTTTCAAAATTGCTTAGTCAATGGGACTGAAGATTACATGCGATGGTATCATAGCAACCCTCGAGTGCACAAAACTTTTTTAGGGAGACCTTGGAAAGAGTATGCAAGGACGGTTTTTCTTCAATGTAATCTCGAAGCGATCATTGACCCACAAGGATGGATGCCGTGGAGTGGCGATTTTGCATTGAAAACTCTTTTCTACGGCGAGTTTGAGAATTTTGGATTAGGATCGAATATCTCTAATCGAGTATCATGGAGTAATCAAATTCCAGCAGAACATGTTTTGACATACTCTATTGAGAATTTCATTCAAGGAGACGAGTGGATTCGTAGATCTCAATAG 1707 47.57 MSKSKFALTSMASLFFLSIISPLLFFSLSSASPPHHSCERPHFTAPPLTVQQHSALSVQPGIRQACMATRFPDQCETSLSQSSYIPPNPSPVQIIQSAILVSLDNLKTAQSMVEDILKESTGNQNRTGAAKICQEVLRYSDYRISCTNESMTSGKIKNCRAWMSAALSYQYDCWSALKYVNDTQVVDKTMSFLDSLTGLSSNALSMIVAYDALGNQTGSWGPPKTERDGYWEGGGSGSTGSDSQFGGGFASELTPNMTVCNDGSEGCCKTVQEAVNAAPDNDSSRKFVIHIKGVYEETVRVPLEKKNIVFLGDGMGKTVITGSLNVGQPGIFTYTSATVAGVAGDGFMARGLTIQNTAGPDAHQAVAFRSDSDLSIIENVEFIGHQDTLYAHSLRQFYKSCRIQGNVDFIFGDSASVFQNCTILISPREIDPQQGKSDVIVAHGRIDPAQSTGFVFQNCLVNGTEDYMRWYHSNPRVHKTFLGRPWKEYARTVFLQCNLEAIIDPQGWMPWSGDFALKTLFYGEFENFGLGSNISNRVSWSNQIPAEHVLTYSIENFIQGDEWIRRSQ 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21412622 21414434 + BLOR07770 Blo16g00522 71713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00522 568 Pfam Pectinesterase 256 561 IPR000070 GO:0030599|GO:0042545
Blo16g00522 568 Pfam Plant invertase/pectin methylesterase inhibitor 62 206 IPR006501 GO:0004857
Blo16g00522 568 TIGRFAM PME_inhib: pectinesterase inhibitor domain 61 207 IPR006501 GO:0004857
Blo16g00522 568 CDD PMEI-like_3 65 207 - -
Blo16g00522 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 59 209 IPR035513 -
Blo16g00522 568 PANTHER PECTINESTERASE 8 567 - -
Blo16g00522 568 PANTHER PECTINESTERASE 8 567 - -
Blo16g00522 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 207 IPR035513 -
Blo16g00522 568 SMART PMEI_2 57 206 IPR006501 GO:0004857
Blo16g00522 568 Gene3D - 250 568 IPR012334 -
Blo16g00522 568 SUPERFAMILY Pectin lyase-like 255 565 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00522 Blo-Chr16:21412622 Blo16g00613 Blo-Chr16:24726464 9.74E-100 dispersed
Blo16g00522 Blo-Chr16:21412622 Blo04g00966 Blo-Chr4:11941301 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00522 - - jre:109021005 759.985