Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00527 ATGGCTTCTACTTTTGCTCTGTTCTTGTGTGTTCCTTTTCTACTTTTAATGGAATCCGGAGCTCAATCAGAAAATTCTACAATAATTAGGTTGGGCTCCACACTCTACGCAAACGGAACTTCTTCGTGGCTCTCGCCCTCTGGCCTTTTCGCCTTTGGTTTCTACCCTCAGGGAAATGGATTTGCTGTGGGTGTGTGGCTGATTAATCGGAATTCTAGCCAGAATACAATTGTGTGGACTGCCAATCGAGACGATCCACCCGTTTCCTTCAGTAGTAGGCTGGATTTATCAGTCGACGGTAAGCTTCATCTTTTTTCTGAGGAAAATTGGAAGCCTATTGCCGATGGGATACACCCTGCCGATTCAGCTGCCATGCTGGATTCTGGTAATTTCGTGCTTTATGATTCGAATTCCTCTGTTATTTGGGAAAGCTTTGATTACCCTACAGACACCATTTTAGGAGGTCAGAATTTAACTAGTGACTATCAGCTGGTTTCCAGTGAATCTGCGTCGAATCAATCGAGCGGGCGTTTTTGCCTTTCGATGCAAGGTGATGGCAATTTGGTTGCTTACCCTTTCAAAACCCCCAATGATCCTGAGGACGCTTACTGGTCAAGCGAAAGTCTCGGAATACCCCGAGCTACCAATCTGAGACTTGATCAGGAAGGCTCTCTAGCTGTCATTCTTGCTAATTCCTCCGCCACAACTTTGGCTCTTGCCTCAACCCCTTCCGTGAAGAACAAAACTCAAATCTACCGAGCGACACTTGATGTAGACGGGAATTTCCGTTTGTATTCTCACGATATTGAAAGCCCCTCGAGCATGTCAGTGGTGGTTCACTGGGCAGCACTCTCAGATGAATGTGACATTAAAGGTTTTTGTGGTCTGAACAGCTACTGCTCAGCCATGAATGGAGGACCTTATTGTTCCTGCTTTCCTGGATTTGATTTAGAGGAACCAAATAACAAGTTTTCAGATTGCTTCAGAAACTTCAATGAAGATGAGTGTAATAGGAAGGAATTGATTCCTATGCAGAATGTATTGTGGGGGAGAGACTCTCCATACTTCAGCGAAGAAATGTCTAGGGGAGATTGCGCCACCTCCTGCCGCGAAGATTGCGACTGTGAGGCAGCTATTTATACGGATTATAGTTGCGACAAGTATAAGCTTCCTCTGCGGTATGCTAAACGAAATATAAACATATCGTCGACGGTGTTCTTGGCAAATATTTCCAAAAATTCGGAAGTTACAAACTTTACTCCTCCATTGATTAAATACAATACTAGAAGATCTCTACTTAAGATCCTGACAATATGTTTTGCCTTTACGTCATGCTTGTGCTTCGTCTTCGCTGTCTTTAGCATCTTCTTTTACATTCGTCGAGTTCATAGGTACAAAAAGCTGTCGCAAAATGCTAAAATGCGTTTAGAGGAAGAGTTCACTATGCGATCATTCACCTACGAAGACCTCAAGAAAGTTACTAATGGCTTCAAGGAGTTGATAGGGAGGGGTTCTTTTGGGAAAATCTATAAGGGGACTTTGTCTGCAAATAACAAGCCTGTTGCTGTGAAGAAACTTGAGAAAATGATTGGTGGGGAGAGGGAGTTTCGAGCCCAAATGGCCACCATCGGACGAACGCATCACAGAAATCTAGTTCGATTACTTGGTTTTTGCATCGAAGGTCCGAAAGTGCTTCTTGTTTATGAGTTTATGAGCAATGGTTCACTTGCAGATCTCTTTAAAGCAAAAACTAGTTTGAGTTGGAGAGAGAGACTGAGAATTGCTCTGGACATGGCCAGAGGTCTTCTTTATCTCCATGAAGAATGTCATGTTCCAATTCCCCATTACAACATCAAGCCCGAAAACATACTTCTTGATGATTCGATGACAGCGAAAATTGCTGATTTTGGACTGGCAAAGCTGTTGATGCCAAACCAGTCTAGAACGAGCAAATACTTAGCACCCGAATGGCAAACCAACGTTTTAATGTCGCGCCAATCAGACATATACAGTTTCGGTATCGTATTGTTGGAGATTGCCTGCTGCAGAAGTAATATAGAAGTGAACGTGGCAACAGCTGATGAGATAGCTCTTACTGTTTGGGCATATAATTGCTATATGGCTGGAAGACTGGATCAGCTCGTTGATGAAGAAAATGTGGACTTGAACATATTGGGAAGAATGGTGAAGGTTGCTCTTTTGTGCATTCAGGATGAACCGCCTTTACGTCCTCCCATGAAACATGTGATCCTGATGTTAGAGCAAATGATGGATATTCCCAACCCTCCGCAGTCTAGCGCTTTAGTCATTTCATAA 2316 43.35 MASTFALFLCVPFLLLMESGAQSENSTIIRLGSTLYANGTSSWLSPSGLFAFGFYPQGNGFAVGVWLINRNSSQNTIVWTANRDDPPVSFSSRLDLSVDGKLHLFSEENWKPIADGIHPADSAAMLDSGNFVLYDSNSSVIWESFDYPTDTILGGQNLTSDYQLVSSESASNQSSGRFCLSMQGDGNLVAYPFKTPNDPEDAYWSSESLGIPRATNLRLDQEGSLAVILANSSATTLALASTPSVKNKTQIYRATLDVDGNFRLYSHDIESPSSMSVVVHWAALSDECDIKGFCGLNSYCSAMNGGPYCSCFPGFDLEEPNNKFSDCFRNFNEDECNRKELIPMQNVLWGRDSPYFSEEMSRGDCATSCREDCDCEAAIYTDYSCDKYKLPLRYAKRNINISSTVFLANISKNSEVTNFTPPLIKYNTRRSLLKILTICFAFTSCLCFVFAVFSIFFYIRRVHRYKKLSQNAKMRLEEEFTMRSFTYEDLKKVTNGFKELIGRGSFGKIYKGTLSANNKPVAVKKLEKMIGGEREFRAQMATIGRTHHRNLVRLLGFCIEGPKVLLVYEFMSNGSLADLFKAKTSLSWRERLRIALDMARGLLYLHEECHVPIPHYNIKPENILLDDSMTAKIADFGLAKLLMPNQSRTSKYLAPEWQTNVLMSRQSDIYSFGIVLLEIACCRSNIEVNVATADEIALTVWAYNCYMAGRLDQLVDEENVDLNILGRMVKVALLCIQDEPPLRPPMKHVILMLEQMMDIPNPPQSSALVIS 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21743462 21745777 + BLOR07775 Blo16g00527 71718

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00527 771 Gene3D - 23 146 IPR036426 -
Blo16g00527 771 SUPERFAMILY alpha-D-mannose-specific plant lectins 170 265 IPR036426 -
Blo16g00527 771 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 1 768 - -
Blo16g00527 771 Gene3D Transferase(Phosphotransferase) domain 1 571 763 - -
Blo16g00527 771 ProSiteProfiles Bulb-type lectin domain profile. 149 277 IPR001480 -
Blo16g00527 771 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Blo16g00527 771 Gene3D Phosphorylase Kinase; domain 1 459 570 - -
Blo16g00527 771 SUPERFAMILY Protein kinase-like (PK-like) 477 756 IPR011009 -
Blo16g00527 771 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 207 IPR036426 -
Blo16g00527 771 PIRSF SRK 1 771 IPR024171 GO:0004674
Blo16g00527 771 ProSiteProfiles Protein kinase domain profile. 495 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00527 771 CDD B_lectin 32 148 IPR001480 -
Blo16g00527 771 Pfam D-mannose binding lectin 76 162 IPR001480 -
Blo16g00527 771 Pfam S-locus glycoprotein domain 240 316 IPR000858 GO:0048544
Blo16g00527 771 SMART blect_4 34 148 IPR001480 -
Blo16g00527 771 Pfam Protein kinase domain 498 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00527 771 Gene3D - 147 275 IPR036426 -
Blo16g00527 771 ProSitePatterns Protein kinases ATP-binding region signature. 501 525 IPR017441 GO:0005524
Blo16g00527 771 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 768 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00527 - - - jre:108996344 787.334
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00527 Blo-Chr16:21743462 Blo16g00531 Blo-Chr16:21874332 0 dispersed
Blo16g00527 Blo-Chr16:21743462 Blo16g00530 Blo-Chr16:21840838 0 proximal
Blo07g00374 Blo-Chr7:6169546 Blo16g00527 Blo-Chr16:21743462 1.54E-45 transposed
Blo16g00527 Blo-Chr16:21743462 Blo04g00961 Blo-Chr4:11779256 2.52E-154 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1259 . Blo16g00527 . . . . Bma09g00237 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000157 2 9 11 4 5 1 3 7 6 4 4 7 6 6 11 6 7 10 2 8 10 8 2 10 9 9 7 5 3 9 191
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84749 PF00069 Pkinase 1.50E-39 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00527 Blo_Chr16 FPKM 20.449917 24.853506 57.424042 61.810841 0.756393 1.485302 1.492542 2.414688 2.588703 3.185861