Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00531 ATGGCTGCTGCTTCTGCATACGCCATATTCATGCTCATTTTTGTGTACTCTGTTACAGGAGGAGAAGCTGGAGAAATACCTCTAGGCCGGTCGCTGTCCACCATGGGAGACCTTTCATGGTCCTCTACTTCTGGGCATTTCGCATTTGGGTTCTACAAGCAAGACGATGGATTCTCGATCGGAACTTGGTTGGTGGGAAAAGAGAAGACGATAATAGTGTGGACAGCAATTCGAAATTATCCCAACGCCACTCTTAGTTTAAACAGTTTTGGCTTCCTTTTGGAAACTGAAAATGGAGAGGAGTATTCGTTAACATTTCCATCTGAAGTAGTTGCTTCTGCCTCCATGCTCAACAATGGAAACTTTGTCCTCTTTAATAAAAACAACTATTATGTATGGCAGAGTTTTGATTATCCAACTGATACCCTTTTAGGGGGCCAGAAACTTGTCGCCGGATATTATTTGTACTCCAGTCGTTCGGAGACCGACCACTCAACTGGACTATTTCATCTCGAAATGCAAACCGATGGGAATCTCGTCCTATACCCTTCCCACACTCCAAAGACCTCAGTAGACAGCTACTGGAACTCCGATACTTCCGGCGGCGATTCAACTTATCTCCTTTTGAGCATATCGCCTGAGTTAGATCTTCTTATTGGAAATTCCTCTGGTGTGATTAAAAGAATCTACCACAACGGTTCTGAGAAAACTTCTGATTACGTCGCCGTAGGATTTCCGATTTACAGAGCTACTCTCGATGTTGATGGGGTTTTCCGTTTGTACTCACATTCTCTAGATGAAAATGGTGAGCTGACGACTGAAATTGTATGGCGGGCTTTGGAGAATGTTTGTGCGGTGAAGAGCTTTTGTGGGTTCAATAGCTATTGCACATTCGATGACTACAAACCCTACTGTCACTGTCTTCCAGGAACAGAAAGCATTGATCAGCGGTCTGGCTGCAAGAAGAACTCGTCTGAAGGTTGCATCGGTGGGAAAGAAAATGGTGGGATTTATAACATTACTGTGTTTGATCACATGACGTGGGGCGATCTTCCTTATTTCCAGGGGAAAATGACGATCGAAGAATGTAAGGTTTCATGCATGGAGGATTGTAATTGCGGGGCGGCGCTGTTTGATGGCAACAATTGCATGAAACAGAGCCTCCCTCTGAGATACATCAATAGGAGAGACGATGTAACTTCAACAGCTCTTGTGAAGGTGGTTGTCAAACCCGTCGGACATTCCAATTCATCTGATCAGATTGCTAAGCAACCACCTGTGACAACAATTACCACAAGAAAAACAGTGGAGAAAATTATCGTTATGACTTTAAGTTCCATCCTTGTGTCGGGCCTCTTTCTCACAATTGCTGGCATTTTCATATATAAATATCGAGTTCTTAAGTACCAGAGACTGCTGGAGAGTGGAAATTGTGGGTTTGTGGAGGATCTTGAATTGAGATTGTTCTCGTACAATGATCTCAAAAAAGCGACAAATGGGTTCAAGCAAAAGTTGGGCAAAGGCTCATTTGGAGCAGTATATAAAGGATCATTCCACAAGGGGAAGAAGCTGGTTGCAGTGAAAAGACTAGAGAAGGTGGTTGAAGATGGGGAGAGGGAGTTCGGGGCTGAGATGAGAACCATTGGGAGAGCCCATCATAAGAACCTAGTAAGCTTACTTGGCTACTGTATCGAAGACTCCAAAAGGCTTCTCGTCTATGAATATATGACAAACGGCTCCCTTGCCGATCTTCTCTTCCGATCGCATACCCCTCCCAATTGGAATGAACGAGTGCGAATTGTAGAAGAGGTTGCAAAGGGCTTACTATATCTCCATGAAGAGTGTGAGACGCCAATCATCCATTGTGATATAAAACCTCAAAACATTTTGATGGATGATTTTTGGACTGCTAAAATATCAGATTTCGGGCTGGCAAAACTTTTAATGCCTGATCAAACGAGGACTTTAACGGGCCCTAGAGGAAGCATTGGCTATTCTGCCCCGGAATGGCAGAAGACCATCCCCATATCTCTCAAAGTAGATGTTTATAGCTATGGAATTGTCCTCCTCGAAATTGTCTGTTGCCGTCGAAATTTTGAGATGAACGTGTCCGACCCAGAAAAAATTATTCTCTCCTCATGGGTTTACAAGTGCTTTGTCAAGCGACAATTGAACAAAATTGTGAATGGTGAGGAAGTTGAGAAGAACGTTTTGGAGAAATTGGTTAAAGTTGCTATGTGGTGTGTTCAAGACCAGCCTGCTCTTCGTCCTTCAATGAAGAGTGTCGTTTTGATGCTTCAAGGGATCACTGACATAGCCATTCCTCCATGTCCGAGCAGCTCGTGA 2346 43.82 MAAASAYAIFMLIFVYSVTGGEAGEIPLGRSLSTMGDLSWSSTSGHFAFGFYKQDDGFSIGTWLVGKEKTIIVWTAIRNYPNATLSLNSFGFLLETENGEEYSLTFPSEVVASASMLNNGNFVLFNKNNYYVWQSFDYPTDTLLGGQKLVAGYYLYSSRSETDHSTGLFHLEMQTDGNLVLYPSHTPKTSVDSYWNSDTSGGDSTYLLLSISPELDLLIGNSSGVIKRIYHNGSEKTSDYVAVGFPIYRATLDVDGVFRLYSHSLDENGELTTEIVWRALENVCAVKSFCGFNSYCTFDDYKPYCHCLPGTESIDQRSGCKKNSSEGCIGGKENGGIYNITVFDHMTWGDLPYFQGKMTIEECKVSCMEDCNCGAALFDGNNCMKQSLPLRYINRRDDVTSTALVKVVVKPVGHSNSSDQIAKQPPVTTITTRKTVEKIIVMTLSSILVSGLFLTIAGIFIYKYRVLKYQRLLESGNCGFVEDLELRLFSYNDLKKATNGFKQKLGKGSFGAVYKGSFHKGKKLVAVKRLEKVVEDGEREFGAEMRTIGRAHHKNLVSLLGYCIEDSKRLLVYEYMTNGSLADLLFRSHTPPNWNERVRIVEEVAKGLLYLHEECETPIIHCDIKPQNILMDDFWTAKISDFGLAKLLMPDQTRTLTGPRGSIGYSAPEWQKTIPISLKVDVYSYGIVLLEIVCCRRNFEMNVSDPEKIILSSWVYKCFVKRQLNKIVNGEEVEKNVLEKLVKVAMWCVQDQPALRPSMKSVVLMLQGITDIAIPPCPSSS 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21874332 21876677 + BLOR07779 Blo16g00531 71722

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00531 781 Gene3D - 139 282 - -
Blo16g00531 781 SUPERFAMILY Protein kinase-like (PK-like) 484 766 IPR011009 -
Blo16g00531 781 Gene3D Transferase(Phosphotransferase) domain 1 576 773 - -
Blo16g00531 781 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 19 780 - -
Blo16g00531 781 ProSitePatterns Protein kinases ATP-binding region signature. 505 528 IPR017441 GO:0005524
Blo16g00531 781 CDD STKc_IRAK 505 769 - -
Blo16g00531 781 Pfam D-mannose binding lectin 107 150 IPR001480 -
Blo16g00531 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 164 262 IPR036426 -
Blo16g00531 781 SMART serkin_6 499 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00531 781 PIRSF SRK 1 781 IPR024171 GO:0004674
Blo16g00531 781 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 780 IPR045874 GO:0004672
Blo16g00531 781 Pfam Protein kinase domain 502 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00531 781 Gene3D Phosphorylase Kinase; domain 1 485 575 - -
Blo16g00531 781 ProSiteProfiles Protein kinase domain profile. 499 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00531 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Blo16g00531 781 Gene3D - 24 138 IPR036426 -
Blo16g00531 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 199 IPR036426 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00531 - - - mesc:122721379 868.611
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00963 Blo-Chr4:11803068 Blo16g00531 Blo-Chr16:21874332 0 dispersed
Blo14g00271 Blo-Chr14:2574239 Blo16g00531 Blo-Chr16:21874332 1.24E-168 dispersed
Blo16g00527 Blo-Chr16:21743462 Blo16g00531 Blo-Chr16:21874332 0 dispersed
Blo16g00530 Blo-Chr16:21840838 Blo16g00531 Blo-Chr16:21874332 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1263 . Blo16g00531 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0015899 2 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 8
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84751 PF00069 Pkinase 1.00E-48 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00531 Blo_Chr16 FPKM 3.860313 4.175363 15.257041 15.279667 5.506944 4.212748 4.545064 0.910543 0.493923 0.547488